Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,205,629	T→C	N210D (AAC→GAC)	ttdR ←	DNA‑binding transcriptional activator Dan

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,205,629	0	T	C	100.0%	269.5 / NA	74	N210D (AAC→GAC)	ttdR	DNA‑binding transcriptional activator Dan
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/36);  total (38/36)

TCCAGAAACGGCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTA  >  NC_000913/3205496‑3205762                                                                                                                                      |                                                                                                                                      tcCAGAAACGGCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCTGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCaa                                                                                                                                 <  2:248524/140‑1 (MQ=255) tcCAGAAACGGCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCaa                                                                                                                                 <  1:190781/140‑1 (MQ=255) tcCAGAAACGGCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCaa                                                                                                                                 >  1:523915/1‑140 (MQ=255) tcCAGAAACGGCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCaa                                                                                                                                 <  1:252859/140‑1 (MQ=255)           gCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCaa                                                                                                                                 >  2:799084/1‑130 (MQ=255)           gCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCaa                                                                                                                                 <  1:799084/130‑1 (MQ=255)           gCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTc                                                                                                                              <  1:468978/133‑1 (MQ=255)           gCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTc                                                                                                                              >  2:468978/1‑133 (MQ=255)           gCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATAtt                                                                                                                       >  2:16778/1‑140 (MQ=255)           gCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATAtt                                                                                                                       >  1:211177/1‑140 (MQ=255)               cacaTCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCAt                                                                                                                   <  2:68296/140‑1 (MQ=255)               cacaTCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCAt                                                                                                                   <  1:366845/140‑1 (MQ=255)                    cccACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTc                                                                                                              >  1:971846/1‑140 (MQ=255)                      cACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCat                                                                                                            >  1:501786/1‑140 (MQ=255)                             aaCGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCgcgc                                                                                                     >  2:103477/1‑140 (MQ=255)                                  agcaTAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCttt                                                                                                >  1:774417/1‑140 (MQ=255)                                            cTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTc                                                                                            <  1:176481/134‑1 (MQ=255)                                            cTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTc                                                                                            >  2:176481/1‑134 (MQ=255)                                              ttGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGct                                                                                                    <  1:231010/124‑1 (MQ=255)                                              ttGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGct                                                                                                    >  2:231010/1‑124 (MQ=255)                                              ttGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACa                                                                                    >  1:727221/1‑140 (MQ=255)                                              ttGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACa                                                                                    >  2:154933/1‑140 (MQ=255)                                              ttGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACa                                                                                    >  1:756860/1‑140 (MQ=255)                                              ttGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACa                                                                                    >  2:20518/1‑140 (MQ=255)                                              ttGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTAGGTCACCAGACa                                                                                    >  1:679123/1‑140 (MQ=255)                                                  ccTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCa                                                                                           <  2:768863/129‑1 (MQ=255)                                                  ccTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCa                                                                                           >  1:768863/1‑129 (MQ=255)                                                   cTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCa                                                                                        <  2:446431/131‑1 (MQ=255)                                                   cTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCa                                                                                        >  1:446431/1‑131 (MQ=255)                                                   cTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCAt                                                                               >  1:34409/1‑140 (MQ=255)                                                     ccAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATga                                                                             <  1:82527/140‑1 (MQ=255)                                                        gcgcCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATgacga                                                                          >  2:116269/1‑140 (MQ=255)                                                         cgcCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGa                                                                                      >  1:776925/1‑127 (MQ=255)                                                         cgcCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGa                                                                                      <  2:776925/127‑1 (MQ=255)                                                           cccATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACtt                                                                       <  1:116269/140‑1 (MQ=255)                                                           cccATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACtt                                                                       >  2:597672/1‑140 (MQ=255)                                                           cccATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACtt                                                                       <  1:16778/140‑1 (MQ=255)                                                             cATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTaa                                                                     <  2:904744/140‑1 (MQ=255)                                                             cATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTaa                                                                     <  1:597672/140‑1 (MQ=255)                                                             cATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTaa                                                                     <  2:774417/140‑1 (MQ=255)                                                                     cacaATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTa                                                             <  2:426434/140‑1 (MQ=255)                                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGAt                                                        >  2:274666/1‑140 (MQ=255)                                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGAt                                                        >  2:532140/1‑140 (MQ=255)                                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGAt                                                        >  1:562465/1‑140 (MQ=255)                                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGAt                                                        >  1:712450/1‑140 (MQ=255)                                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGAt                                                        >  1:868650/1‑140 (MQ=255)                                                                             cgccgcTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATtgt                                                     >  2:567707/1‑140 (MQ=255)                                                                              gccgcTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCTTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGGAGGGATtgtg                                                    >  1:675347/1‑140 (MQ=255)                                                                                 gcTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCt                                                 <  1:103477/140‑1 (MQ=255)                                                                                 gcTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCt                                                 <  2:557150/140‑1 (MQ=255)                                                                                    aTTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCg                                              >  1:363368/1‑140 (MQ=255)                                                                                       ggaggaAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGat                                           <  2:562465/140‑1 (MQ=255)                                                                                            aaaGATGCCCGCTTACCTTCACCGACTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATAtttt                                      <  2:523915/140‑1 (MQ=255)                                                                                             aaGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATAttttt                                     >  2:319308/1‑140 (MQ=255)                                                                                             aaGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATAttttt                                     >  1:885829/1‑140 (MQ=255)                                                                                                 tGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAg                                 >  2:652101/1‑140 (MQ=255)                                                                                                  gCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGa                                <  2:971846/140‑1 (MQ=255)                                                                                                  gCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGa                                <  1:826740/140‑1 (MQ=255)                                                                                                   cccGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGACATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGAt                               >  2:907378/1‑140 (MQ=255)                                                                                                    ccGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATa                              <  2:33078/140‑1 (MQ=255)                                                                                                    ccGCTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATa                              <  1:154933/140‑1 (MQ=255)                                                                                                       cTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTc                           <  2:756860/140‑1 (MQ=255)                                                                                                       cTTACCTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTc                           <  2:211177/140‑1 (MQ=255)                                                                                                            cTTCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtg                      <  2:501786/140‑1 (MQ=255)                                                                                                              tCACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtgct                    <  1:20956/140‑1 (MQ=255)                                                                                                               cACCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtgctg                   <  1:870800/140‑1 (MQ=255)                                                                                                                aCCGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtgctgc                  >  2:487311/1‑140 (MQ=255)                                                                                                                 ccGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTgcg                 <  2:363368/140‑1 (MQ=255)                                                                                                                  cGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtgct                    <  2:742702/136‑1 (MQ=255)                                                                                                                  cGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtgct                    >  1:742702/1‑136 (MQ=255)                                                                                                                  cGATTTTTTCTCCTGACCGTCCCCCAACTCCCATATTACATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGAGTGTGGCTACGGATATTTTTGCAGATACTCAGGTGATgcgc                >  2:870800/1‑140 (MQ=255)                                                                                                                       ttttCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCataat           <  2:885829/140‑1 (MQ=255)                                                                                                                        tttCTCCTGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCataata          <  1:567707/140‑1 (MQ=255)                                                                                                                               tGACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCtttt   >  1:450714/1‑140 (MQ=255)                                                                                                                                gACCGTCCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTa  >  2:574943/1‑140 (MQ=255)                                                                                                                                      |                                                                                                                                      TCCAGAAACGGCAACACATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTA  >  NC_000913/3205496‑3205762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑