Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,219,997	A→G	pseudogene (397/2648 nt)	ycgH →	putative transporter component, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,219,997	0	A	G	100.0%	325.8 / NA	89	pseudogene (397/2648 nt)	ycgH	putative transporter component, N‑terminal fragment
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (44/45);  total (44/45)

TCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAACGAACATT  >  NC_000913/1219862‑1220128                                                                                                                                        |                                                                                                                                    tCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCAt                                                                                                                                 <  2:207493/140‑1 (MQ=255)  atatcggTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATc                                                                                                                                <  1:909664/135‑1 (MQ=255)    tATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCtt                                                                                                                              >  1:89296/1‑140 (MQ=255)          aTTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGaa                                                                                                                        >  1:905433/1‑140 (MQ=255)           tttCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAAt                                                                                                                       <  2:308462/140‑1 (MQ=255)           tttCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAAt                                                                                                                       <  2:89296/140‑1 (MQ=255)           tttCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAAt                                                                                                                       <  2:872952/140‑1 (MQ=255)              cTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGt                                                                                                                    <  1:169957/140‑1 (MQ=255)                 ttGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGAt                                                                                                                 >  1:238399/1‑140 (MQ=255)                 ttGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGA‑CTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATa                                                                                                                >  1:25642/1‑140 (MQ=255)                      aGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTc                                                                                                            >  1:63272/1‑140 (MQ=255)                           aaaCAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCagtcg                                                                                                       >  1:250524/1‑140 (MQ=255)                              cAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCagtcgagt                                                                                                    <  2:63272/140‑1 (MQ=255)                                 aGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCgg                                                                                                 >  1:120330/1‑140 (MQ=255)                                   tattatATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGt                                                                                               <  1:847826/140‑1 (MQ=255)                                   tattatATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGt                                                                                               <  1:927323/140‑1 (MQ=255)                                   tattatATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGt                                                                                               <  2:532302/140‑1 (MQ=255)                                       atatataAGCGATAGCGATATTAAGACCTCTGGAAGCGNANCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTgggg                                                                                           <  1:565968/140‑1 (MQ=255)                                           ataAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCata                                                                                       >  1:932921/1‑140 (MQ=255)                                             aaGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATAtt                                                                                     >  2:278690/1‑140 (MQ=255)                                               gcgatagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCa                                                                                   >  1:368623/1‑140 (MQ=255)                                               gcgatagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCa                                                                                   >  1:686979/1‑140 (MQ=255)                                                  atagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCg                                                                                >  2:238496/1‑140 (MQ=255)                                                  atagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCg                                                                                >  2:255398/1‑140 (MQ=255)                                                  atagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCg                                                                                >  1:691603/1‑140 (MQ=255)                                                  atagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCg                                                                                >  2:981481/1‑140 (MQ=255)                                                  atagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCg                                                                                >  1:274847/1‑140 (MQ=255)                                                  atagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCg                                                                                >  2:722325/1‑140 (MQ=255)                                                  atagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCg                                                                                >  2:370478/1‑140 (MQ=255)                                                   tagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCata                                                                                       <  2:41834/132‑1 (MQ=255)                                                   tagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCata                                                                                       >  1:41834/1‑132 (MQ=255)                                                   tagcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCgg                                                                               <  2:770006/140‑1 (MQ=255)                                                    agcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCggg                                                                              >  2:196116/1‑140 (MQ=255)                                                    agcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCggg                                                                              >  1:193803/1‑140 (MQ=255)                                                    agcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCggg                                                                              >  2:885047/1‑140 (MQ=255)                                                    agcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCggg                                                                              <  2:691603/140‑1 (MQ=255)                                                    agcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCggg                                                                              <  1:722325/140‑1 (MQ=255)                                                    agcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCggg                                                                              <  2:30230/140‑1 (MQ=255)                                                    agcgataTTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGATGGGGCATATTCAGCggg                                                                              <  1:207574/140‑1 (MQ=255)                                                             aaGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAg                                                                     <  2:686979/140‑1 (MQ=255)                                                              aGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGc                                                                    <  2:193803/140‑1 (MQ=255)                                                                   tctGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGt                                                               >  1:324327/1‑140 (MQ=255)                                                                   tctGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGt                                                               >  1:342596/1‑140 (MQ=255)                                                                   tctGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGt                                                               >  1:407283/1‑140 (MQ=255)                                                                   tctGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGt                                                               <  2:120330/140‑1 (MQ=255)                                                                    ctGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGtt                                                              >  2:125323/1‑140 (MQ=255)                                                                    ctGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGtt                                                              >  1:319944/1‑140 (MQ=255)                                                                     tGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTa                                                             >  2:598188/1‑140 (MQ=255)                                                                     tGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATG‑ATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTaa                                                            <  2:518372/140‑1 (MQ=255)                                                                     tGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGCGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTa                                                             >  2:779410/1‑140 (MQ=255)                                                                        aaGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATg                                                          <  2:368623/140‑1 (MQ=255)                                                                         aGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGa                                                         <  2:407283/140‑1 (MQ=255)                                                                         aGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGa                                                         <  2:238399/140‑1 (MQ=255)                                                                         aGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGa                                                         <  2:25642/140‑1 (MQ=255)                                                                          gCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGAt                                                        >  2:182428/1‑140 (MQ=255)                                                                           cGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGAtt                                                       <  1:255398/140‑1 (MQ=255)                                                                            gTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGc                                                                    >  2:553574/1‑126 (MQ=255)                                                                            gTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGc                                                                    <  1:553574/126‑1 (MQ=255)                                                                             tATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCt                                                     >  1:624669/1‑140 (MQ=255)                                                                             tATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCt                                                     >  2:393227/1‑140 (MQ=255)                                                                             tATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGAGGGACTTTTAAGCCAGGTTAATGATTCt                                                     >  1:498931/1‑140 (MQ=255)                                                                                 tGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGaaa                                                 <  1:278690/140‑1 (MQ=255)                                                                                 tGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGaaa                                                 <  1:885047/140‑1 (MQ=255)                                                                                 tGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGaaa                                                 <  2:324327/140‑1 (MQ=255)                                                                                   aCAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAg                                               >  2:5221/1‑140 (MQ=255)                                                                                    cAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGa                                              <  2:824447/140‑1 (MQ=255)                                                                                    cAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGa                                              <  1:779410/140‑1 (MQ=255)                                                                                    cAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGa                                              >  2:547823/1‑140 (MQ=255)                                                                                    cAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCCTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGa                                              <  2:534667/140‑1 (MQ=255)                                                                                     aaaGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGAt                                             >  1:331271/1‑140 (MQ=255)                                                                                      aaGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATg                                            <  1:370478/140‑1 (MQ=255)                                                                                        gAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGt                                          <  1:598188/140‑1 (MQ=255)                                                                                           aaTGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTaaa                                       <  1:121349/140‑1 (MQ=255)                                                                                             tGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGACGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTTAAAAGATGGTAAATa                                     >  2:684976/1‑140 (MQ=255)                                                                                                             agcGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAAc                     >  1:653397/1‑140 (MQ=255)                                                                                                             agcGCAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAAc                     <  2:485522/140‑1 (MQ=255)                                                                                                              gcgcAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTg                         <  1:821848/135‑1 (MQ=255)                                                                                                              gcgcAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTg                         >  2:821848/1‑135 (MQ=255)                                                                                                              gcgcAGTAGTCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCAGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAAcc                    >  1:798209/1‑140 (MQ=255)                                                                                                                    tagtCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGAt              <  1:125323/140‑1 (MQ=255)                                                                                                                    tagtCAGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGAGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGAt              <  2:498931/140‑1 (MQ=255)                                                                                                                         aGTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAAc         >  1:336911/1‑140 (MQ=255)                                                                                                                          gTGAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAACg        <  2:274847/140‑1 (MQ=255)                                                                                                                            gAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAACGaa      <  2:653397/140‑1 (MQ=255)                                                                                                                            gAATTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAACGaa      <  1:196116/140‑1 (MQ=255)                                                                                                                              aTTTGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAACGAACa    >  2:263283/1‑140 (MQ=255)                                                                                                                                ttGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGAt              >  1:692795/1‑128 (MQ=255)                                                                                                                                ttGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGAt              <  2:692795/128‑1 (MQ=255)                                                                                                                                ttGGTGGCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAACGAACAtt  >  1:658723/1‑140 (MQ=255)                                                                                                                                     ggCGCCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAAc         <  2:272642/128‑1 (MQ=255)                                                                                                                                        |                                                                                                                                    TCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAACGAACATT  >  NC_000913/1219862‑1220128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑