Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,432,217	G→A	A1057T (GCT→ACT)	stfR →	Rac prophage; putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,432,217	0	G	A	100.0%	279.3 / NA	79	A1057T (GCT→ACT)	stfR	Rac prophage; putative membrane protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (39/40);  total (39/40)

TGAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTGCTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGTTAACGC  >  NC_000913/1432080‑1432347                                                                                                                                          |                                                                                                                                   tgAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctact                                                                                                                                  >  2:762768/1‑140 (MQ=255) tgAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctact                                                                                                                                  >  2:445212/1‑140 (MQ=255) tgAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctact                                                                                                                                  >  1:36910/1‑140 (MQ=255) tgAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctact                                                                                                                                  >  2:735607/1‑140 (MQ=255)  gAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctactg                                                                                                                                 <  1:819828/140‑1 (MQ=255)   aGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTgg                                                                                                                                <  1:735607/140‑1 (MQ=255)   aGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTgg                                                                                                                                >  2:51128/1‑140 (MQ=255)   aGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTgg                                                                                                                                >  2:285777/1‑140 (MQ=255)   aGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTgg                                                                                                                                <  1:445212/140‑1 (MQ=255)   aGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTgg                                                                                                                                >  2:253498/1‑140 (MQ=255)     cGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGgcg                                                                                                                              <  2:90577/140‑1 (MQ=255)         tctACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGcaca                                                                                                                          <  1:966407/140‑1 (MQ=255)         tctACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGcaca                                                                                                                          >  2:113017/1‑140 (MQ=255)         tctACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGcaca                                                                                                                          <  2:439154/140‑1 (MQ=255)           tACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATa                                                                                                                        <  2:842262/140‑1 (MQ=255)                  tCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGcaca                                                                                                                          <  2:5246/131‑1 (MQ=255)                  tCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGcaca                                                                                                                          >  1:5246/1‑131 (MQ=255)                  tCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCcactc                                                                                                                 >  1:532296/1‑140 (MQ=255)                            cacacacacaCTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGc                                                                                                       >  2:516245/1‑140 (MQ=255)                                  cacacTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCActgct                                                                                                 <  1:253498/140‑1 (MQ=255)                                      ctcactAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCaa                                                                                             >  1:264866/1‑140 (MQ=255)                                       tcactAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAg                                                                                            <  2:801204/140‑1 (MQ=255)                                         actAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAgcg                                                                                          >  2:6083/1‑140 (MQ=255)                                         actAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAgcg                                                                                          >  1:668508/1‑140 (MQ=255)                                           tAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCa                                                                                        >  1:904214/1‑140 (MQ=255)                                               cAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTg                                                                                    >  1:261114/1‑140 (MQ=255)                                                 aCGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGca                                                                                  <  1:51128/140‑1 (MQ=255)                                                 aCGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGca                                                                                  <  1:516245/140‑1 (MQ=255)                                                 aCGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGca                                                                                  <  1:285777/140‑1 (MQ=255)                                                  cGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGca                                                                                  <  1:468830/139‑1 (MQ=255)                                                  cGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGca                                                                                  >  2:468830/1‑139 (MQ=255)                                                   gTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGcaca                                                                                <  1:451688/140‑1 (MQ=255)                                                          cGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCAt                                                                         <  2:657929/140‑1 (MQ=255)                                                           ggCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATa                                                                        <  2:264866/140‑1 (MQ=255)                                                           ggCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATa                                                                        >  2:265489/1‑140 (MQ=255)                                                           ggCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATa                                                                        <  2:441659/140‑1 (MQ=255)                                                             cTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACt                                                                      <  1:877653/140‑1 (MQ=255)                                                             cTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACt                                                                      <  1:265489/140‑1 (MQ=255)                                                             cTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACt                                                                      >  1:249818/1‑140 (MQ=255)                                                              tAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTg                                                                     <  1:762768/140‑1 (MQ=255)                                                              tAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTg                                                                     >  1:662661/1‑140 (MQ=255)                                                              tAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTg                                                                     <  1:6083/140‑1 (MQ=255)                                                                    tAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATC‑AAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTAt                                                              <  2:843896/140‑1 (MQ=255)                                                                        tCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTgg                                                           <  2:662661/140‑1 (MQ=255)                                                                        tCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTgg                                                           <  2:249818/140‑1 (MQ=255)                                                                          cGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGCGCGCATGCACATACt                                                                      >  1:128264/1‑127 (MQ=37)                                                                          cGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGCGCGCATGCACATACt                                                                      <  2:128264/127‑1 (MQ=25)                                                                           ggTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTAt                                                              >  1:841023/1‑134 (MQ=255)                                                                           ggTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTAt                                                              <  2:841023/134‑1 (MQ=255)                                                                           ggTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGc                                                        >  1:777366/1‑140 (MQ=255)                                                                           ggTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGc                                                        >  1:560080/1‑140 (MQ=255)                                                                           ggTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGCGCGCATGCACATACt                                                                      <  1:475878/126‑1 (MQ=25)                                                                           ggTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGCGCGCATGCACATACt                                                                      >  2:475878/1‑126 (MQ=25)                                                                                  gTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACg                                                 >  2:893301/1‑140 (MQ=255)                                                                                            aacaaGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTg                                       >  1:60247/1‑140 (MQ=255)                                                                                             acaaGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGc                                      >  2:260279/1‑140 (MQ=255)                                                                                              caaGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCg                                     <  2:668508/140‑1 (MQ=255)                                                                                                aGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGAt                                   <  2:60247/140‑1 (MQ=255)                                                                                                   ttGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTgg                                <  2:532296/140‑1 (MQ=255)                                                                                                      tCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTc                             >  2:238044/1‑140 (MQ=255)                                                                                                      tCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTc                             >  1:289302/1‑140 (MQ=255)                                                                                                      tCTGTTGTGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTc                             >  2:188050/1‑140 (MQ=255)                                                                                                         gttgtGCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTcaca                          <  1:893301/140‑1 (MQ=255)                                                                                                           tgtgCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATg                        >  1:778304/1‑140 (MQ=255)                                                                                                            gtgCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATgg                       >  1:882241/1‑140 (MQ=255)                                                                                                             tgCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGTGATTGGTTCACATGGa                      <  2:560080/140‑1 (MQ=255)                                                                                                             tgCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGa                      <  2:904214/140‑1 (MQ=255)                                                                                                             tgCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGa                      <  2:777366/140‑1 (MQ=255)                                                                                                              gCATAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGac                     <  2:778304/140‑1 (MQ=255)                                                                                                                aTAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTgg                                >  1:219725/1‑127 (MQ=255)                                                                                                                aTAATCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTgg                                <  2:219725/127‑1 (MQ=255)                                                                                                                    tCAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCa               >  2:47848/1‑140 (MQ=255)                                                                                                                     cAAAACTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCAt              <  2:882241/140‑1 (MQ=255)                                                                                                                       aaaCTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGa                      <  2:426310/130‑1 (MQ=255)                                                                                                                       aaaCTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGa                      >  1:426310/1‑130 (MQ=255)                                                                                                                       aaaCTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACTATCa            >  2:336946/1‑140 (MQ=255)                                                                                                                       aaaCTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCa            >  2:339692/1‑140 (MQ=255)                                                                                                                       aaaCTATGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCa            >  2:392435/1‑140 (MQ=255)                                                                                                                            aTGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGtt       >  1:124228/1‑140 (MQ=255)                                                                                                                            aTGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGtt       >  1:751400/1‑140 (MQ=255)                                                                                                                            aTGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGAATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGtt       >  2:975595/1‑140 (MQ=255)                                                                                                                             tGCAACATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGTTa      >  1:197643/1‑140 (MQ=255)                                                                                                                                aaCATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGTTAACg   <  2:36910/140‑1 (MQ=255)                                                                                                                                 aCATCATCTACTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGTTAACgc  <  2:381477/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                   TGAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTGCTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGTTAACGC  >  NC_000913/1432080‑1432347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑