Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,714,085	T→C	G439G (GGT→GGC)	dtpA →	dipeptide/tripeptide:H(+) symporter DtpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,714,085	0	T	C	100.0%	146.2 / NA	40	G439G (GGT→GGC)	dtpA	dipeptide/tripeptide:H(+) symporter DtpA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (18/22);  total (18/22)

TCGGGGAACTGATGATCTCTGGTCTGGGTCTGGCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGTATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTGATGCTGCTGACCG  >  NC_000913/1713949‑1714203                                                                                                                                         |                                                                                                                       tCGGGGAACTGATGATCTCTGGTCTGCGTCTGGCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCatg                                                                                                                     <  1:579030/140‑1 (MQ=255)    gggAACTGATGATCTCTGGTCTGGGTCTGGCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCatgatg                                                                                                                  >  1:70895/1‑140 (MQ=255)         cTGATGATCTCTGGTCTGGGTCTGGCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCtgt                                                                                                             <  1:150305/140‑1 (MQ=255)                  tctggtctggGTCTGGCAATGGTTGCTCAACTCGTTCCACAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATaa                                                                                                    <  2:278753/140‑1 (MQ=255)                      gtctgggtctggCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGtt                                                                                                >  2:829842/1‑140 (MQ=255)                         tgggtctggCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTAcc                                                                                             >  1:550634/1‑140 (MQ=255)                          gggtctggCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCg                                                                                            <  2:550634/140‑1 (MQ=255)                           ggtctggCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGa                                                                                           >  1:395718/1‑140 (MQ=255)                               tggCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCg                                                                                       <  1:665610/140‑1 (MQ=255)                                ggCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGc                                                                                      >  2:48384/1‑140 (MQ=255)                                ggCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGc                                                                                      >  1:541803/1‑140 (MQ=255)                                ggCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGc                                                                                      >  1:327340/1‑140 (MQ=255)                                        ttGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCa                                                                              <  2:229541/140‑1 (MQ=255)                                          gCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACt                                                                            >  2:689629/1‑140 (MQ=255)                                            tCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTgg                                                                          <  1:48384/140‑1 (MQ=255)                                                     tCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGCTCCTGACCACTGCCGGTGCAAACCTGATTGGGGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATg                                                                 >  2:771237/1‑140 (MQ=255)                                                      ccGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATgg                                                                >  1:94841/1‑140 (MQ=255)                                                        gCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTc                                                              <  1:829842/140‑1 (MQ=255)                                                         cAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCTCTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTcg                                                             <  1:459929/140‑1 (MQ=255)                                                           gCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTcgcg                                                           <  2:395718/140‑1 (MQ=255)                                                             gTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTa                                                         >  2:316734/1‑140 (MQ=255)                                                              tCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTAt                                                        >  1:527647/1‑140 (MQ=255)                                                                       cTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGa                                               <  2:527647/140‑1 (MQ=255)                                                                        ttCATTATGGGTAGCTGGTTCCTGACCTCTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGAt                                              >  2:401368/1‑140 (MQ=255)                                                                                    aGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTAc                                  >  1:786810/1‑140 (MQ=255)                                                                                      cTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTg                                >  1:101978/1‑140 (MQ=255)                                                                                       tGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGc                               <  1:328992/140‑1 (MQ=255)                                                                                           tCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGt                            <  1:630121/139‑1 (MQ=255)                                                                                           tCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGt                            >  2:630121/1‑139 (MQ=255)                                                                                              tGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTAtt                        <  2:541803/140‑1 (MQ=255)                                                                                               gACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTg                       <  1:128689/140‑1 (MQ=255)                                                                                               gACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTg                       <  2:70895/140‑1 (MQ=255)                                                                                                aCCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGc                      <  1:485286/140‑1 (MQ=255)                                                                                                    cTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGc                               >  2:43428/1‑127 (MQ=255)                                                                                                    cTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGc                               <  1:43428/127‑1 (MQ=255)                                                                                                       ccGGTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTg               <  2:327340/140‑1 (MQ=255)                                                                                                         ggTGCAAACCTGATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTGAt             <  1:771237/140‑1 (MQ=255)                                                                                                                    gATTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTGATGCTGCTGACcg  <  2:101978/140‑1 (MQ=255)                                                                                                                     aTTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTg               <  2:591165/126‑1 (MQ=255)                                                                                                                     aTTGGTGGTTATGTTGCGGGCATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTg               >  1:591165/1‑126 (MQ=255)                                                                                                                                         |                                                                                                                       TCGGGGAACTGATGATCTCTGGTCTGGGTCTGGCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGTATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTGATGCTGCTGACCG  >  NC_000913/1713949‑1714203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑