Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,736,876	T→C	T139A (ACC→GCC)	ydhP ←	putative transporter YdhP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,736,876	0	T	C	100.0%	55.6 / NA	17	T139A (ACC→GCC)	ydhP	putative transporter YdhP
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (11/6);  total (11/6)

CACCTTTAGGTAATGAGAAGAACAGACTTACCATTGAAATCACTCCCAGCCCCGCCGTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGTTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCAGGCTGGTCAAAATGCGTGAAAGCATCAGGGTCA  >  NC_000913/1736741‑1737010                                                                                                                                        |                                                                                                                                       cccttttAGGTAATGAGAAGAACAGATTTCCCATTAAAATCCCCCCCAGCCCCGCCGTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAAc                                                                                                                                    <  1:142143/136‑1 (MQ=255) ccctttgaGGAAATGAAAAAAACAGACTTCCCATAAAAACCCCCCCCACCCCCGCCGTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAAc                                                                                                                                    <  1:590448/133‑1 (MQ=255)   ccTTTAGGTAATGAGAAGAACAGACTTACCATTGAAATCACTCCCAGCCCCGCCGTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAAccc                                                                                                                                  >  2:408515/1‑140 (MQ=255)              tGAGAAGAACAGACTTACCATTGAAATCACTCCCAGCCCCGCCGTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAg                                                                                                                       >  2:478615/1‑140 (MQ=255)                               ccATTGAAATCACTCCCAGCCCCGCCGTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGcc                                                                                                      >  2:344852/1‑140 (MQ=255)                                        tCACTCCCAGCCCCGCCGTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGt                                                                                             >  2:109802/1‑140 (MQ=255)                                               cAGCCCCGCCGTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGca                                                                                      <  1:658303/140‑1 (MQ=255)                                                aGCCCCGCCGTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGcac                                                                                     >  2:35688/1‑140 (MQ=255)                                                      gccgTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTTGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCt                                                                               >  1:182592/1‑140 (MQ=255)                                                                                          tCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTcc                                           <  2:463166/140‑1 (MQ=255)                                                                                                aaCCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGAtt                                     >  2:164109/1‑140 (MQ=255)                                                                                                  ccAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCa                                   >  2:63398/1‑140 (MQ=255)                                                                                                        cgccgcCGGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCAGGCTgg                             >  1:383608/1‑140 (MQ=255)                                                                                                              cgGCACGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCAGGCTGGTCaaaa                       <  2:270319/140‑1 (MQ=255)                                                                                                                   cGCCACCGATATTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCAGGCTGGTCAAAATGCGt                  >  2:42223/1‑140 (MQ=255)                                                                                                                           atatTTGCCAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCAGGCTGGTCAAAATGCGTGAAAGCAt          <  1:712249/140‑1 (MQ=255)                                                                                                                                   cAGGGCTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCAGGCTGGTCAAAATGCGTGAAAGCATCAGGGTCa  >  2:356201/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                       CACCTTTAGGTAATGAGAAGAACAGACTTACCATTGAAATCACTCCCAGCCCCGCCGTTGCCAGAAATGACATCCGCCAGCCGATGGTTTCACCCAACCAGGTCGCCGCCGGCACGCCACCGATATTTGCCAGGGTTAACCCCATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCAGGCTGGTCAAAATGCGTGAAAGCATCAGGGTCA  >  NC_000913/1736741‑1737010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑