Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,692,772 | T→C | E924E (GAA→GAG) | purL ← | phosphoribosylformylglycinamide synthetase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,692,772 | 0 | T | C | 97.8% | 149.5 / ‑4.6 | 45 | E924E (GAA→GAG) | purL | phosphoribosylformylglycinamide synthetase |
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (21/23); total (22/23) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.89e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
CCGTTGGCGGTAATCACAAAACGGTCACCGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGTTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGGCCGCCATCAGAGCGGTCGTGATACGCCAGC > NC_000913/2692635‑2692907 | ccGTTGGCGGTAATCACAAAACGGTCACCGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGctc > 2:428007/1‑140 (MQ=255) ggCGGTAATCACAAAACGGTCACCGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCGTGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGt > 1:147601/1‑140 (MQ=255) ggCGGTAATCACAAAACGGTCACCGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGt > 1:808403/1‑140 (MQ=255) cacaAAACGGTCACCGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAAcg < 2:613984/140‑1 (MQ=255) gTCACCGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTATGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGc < 2:608857/140‑1 (MQ=255) tCACCGGAAACCGCCTGCCCTTCATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGc < 1:586021/139‑1 (MQ=255) tCACCGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGc > 2:723030/1‑139 (MQ=255) tCACCGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGc < 1:723030/139‑1 (MQ=255) tCACCGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGc > 2:586021/1‑139 (MQ=255) cGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCg < 1:734357/140‑1 (MQ=255) cGGAAACCACCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCg < 2:195943/140‑1 (MQ=255) gAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTc > 2:506024/1‑140 (MQ=255) cGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCa < 2:135785/140‑1 (MQ=255) ccTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGc < 1:501343/140‑1 (MQ=255) ccTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGc < 1:506024/140‑1 (MQ=255) tGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCcgc > 2:677188/1‑140 (MQ=255) tGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCcgc > 2:686837/1‑140 (MQ=255) tGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCcgc > 1:66002/1‑140 (MQ=255) tGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCcgc > 1:267858/1‑140 (MQ=255) tGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCcgc > 1:779064/1‑140 (MQ=255) cacaATCAGCAAGCCCGTGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCa < 2:147601/140‑1 (MQ=255) acaATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCaa > 2:571971/1‑140 (MQ=255) acaATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCaa > 1:695166/1‑140 (MQ=255) caATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAAt < 1:677188/140‑1 (MQ=255) gCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCcaca < 1:428007/140‑1 (MQ=255) cccATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGAc < 2:695166/140‑1 (MQ=255) ccATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGAcc > 2:190860/1‑140 (MQ=255) cATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCa > 2:448310/1‑140 (MQ=255) gCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGc > 2:124898/1‑140 (MQ=255) aGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCAt < 1:686837/140‑1 (MQ=255) tACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGTTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCAttt > 2:829540/1‑140 (MQ=255) tACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCAttt > 1:457046/1‑140 (MQ=255) cGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTcc < 2:779064/140‑1 (MQ=255) cGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTcc > 1:35820/1‑140 (MQ=255) gACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGc < 2:457046/140‑1 (MQ=255) gACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGc > 1:454919/1‑140 (MQ=255) cACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACcagc > 1:32392/1‑140 (MQ=255) gTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGgc > 2:590078/1‑140 (MQ=255) gTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGgc < 1:571971/140‑1 (MQ=255) gTCAGCGGCACGAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGgc < 2:32392/140‑1 (MQ=255) gAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGGCCGCCATCagag < 1:491518/140‑1 (MQ=255) gAACCTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGGCCGCCATCagag < 1:124898/140‑1 (MQ=255) cTGAATCACCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGGCCGCCATCAGAGCGGt < 1:590078/140‑1 (MQ=255) aCCGCACCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGGCCGCCATCAGAGCGGTCGTGATa > 2:706998/1‑140 (MQ=255) aCCCAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGGCCGCCATCAGAGCGGTCGTGATACGCca < 2:808403/140‑1 (MQ=255) ccAGCTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGGCCGCCATCAGAGCGGTCGTGATACGCcagc < 1:743513/140‑1 (MQ=255) | CCGTTGGCGGTAATCACAAAACGGTCACCGGAAACCGCCTGCCCTACATAATGGACACAATCAGCAAGCCCATGCTGTGCCAGTACGGACTCGACCGCTTCACGGTCAGCGGCACGAACCTGAATCACCGCACCCAGTTCTTCGTTAAACAACGCCGCCAGGCGATCGTCACCCAGAGTGGCGATATCCGCGTCAATGCCACAATGACCAGCAAAGGCCATTTCCGCCAGCGTTACCAGCAGGCCGCCATCAGAGCGGTCGTGATACGCCAGC > NC_000913/2692635‑2692907 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |