Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 587,362 | A→G | V207A (GTC→GCC) | ybcH ← | DUF4434 domain‑containing protein YbcH |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 587,362 | 0 | A | G | 96.9% | 99.3 / ‑4.3 | 32 | V207A (GTC→GCC) | ybcH | DUF4434 domain‑containing protein YbcH |
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (15/16); total (16/16) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 |
GTTCATAAACAACGCCGCTGGCAGGGGCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGACATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACATCGCTAATCAGCCGCTGCGCGTTGTTTAAC > NC_000913/587246‑587496 | gTTCATAAACAACGCCGCTGGCAGGGGCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACg < 1:133223/140‑1 (MQ=255) cATAAACAACGCCGCTGGCAGGGGCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACgtgt > 1:44690/1‑140 (MQ=255) acaacGCCGCTGGCAGGGGCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCcag < 1:386089/140‑1 (MQ=255) acGCCGCTGGCAGGGGCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGTGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCcagcag > 2:753730/1‑140 (MQ=255) acGCCGCTGGCAGGGGCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCcagcag < 2:44690/140‑1 (MQ=255) cgccgcTGGCAGGGGCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGt < 1:635514/140‑1 (MQ=255) gccgcTGGCAGGGGCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGtt > 2:307745/1‑140 (MQ=255) cTGGCAGGGGCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGACATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCg > 2:646142/1‑140 (MQ=255) gggCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCGGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCa > 2:632294/1‑140 (MQ=255) ggCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCAt > 2:630000/1‑140 (MQ=255) ggCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCAt < 2:378531/140‑1 (MQ=255) ggCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCAt < 2:335283/140‑1 (MQ=255) ggCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCAt < 2:325561/140‑1 (MQ=255) ggACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCGGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCggg < 1:632294/140‑1 (MQ=255) tGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTATACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACAt > 2:513168/1‑140 (MQ=255) gcgcTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGc < 1:513168/140‑1 (MQ=255) aaTAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTg < 2:505987/140‑1 (MQ=255) tCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAAc > 2:620740/1‑140 (MQ=255) gCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGt > 2:180736/1‑140 (MQ=255) gCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGt < 1:180736/140‑1 (MQ=255) ttCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTg > 2:27068/1‑140 (MQ=255) cAGTTTATCCACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACAt < 1:630000/140‑1 (MQ=255) ccACGCCGCTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACATCGCTAATc > 2:565879/1‑140 (MQ=255) cgccgcTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACATCGCTAATCAGc > 2:44052/1‑140 (MQ=255) gccgcTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGaaa > 2:319821/1‑125 (MQ=255) gccgcTGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGaaa < 1:319821/125‑1 (MQ=255) tGCCATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCTAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACATCGCTAATCAGCCGCTgc > 2:291624/1‑140 (MQ=255) cATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACATCGCTAATCAGCCGCTGcgcg < 1:307745/140‑1 (MQ=255) cATCCTGTACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACATCGCTAATCAGCCGCTGcgcg < 1:481779/140‑1 (MQ=255) tACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACATCGCTAATCAGCCGCTGCGCGTTGTTTa > 2:193417/1‑140 (MQ=255) tACCCAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACATCGCTAATCAGCCGCTGCGCGTTGTTTa < 1:193417/140‑1 (MQ=255) cccAGGCATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACATCGCTAATCAGCCGCTGCGCGTTGTTTAAc > 2:688838/1‑140 (MQ=255) | GTTCATAAACAACGCCGCTGGCAGGGGCGGGACTTTGGCAATCGGCGCTGGCCTGTAAATAACGTTCACGCTGTTCAGCGGTCAGTTTATCCACGCCGCTGCCATCCTGTACCCAGACATTAACGCCGGTTGCTTTAACGTGTTCCAGCAGTTGGCGATAGCCATCGGGCGACATGTTTCCGGCGAAAAAACTACTGATATAAACCGGTTTTGCTGAAACATCGCTAATCAGCCGCTGCGCGTTGTTTAAC > NC_000913/587246‑587496 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |