BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,484,088	(C)_6→7	coding (887/1023 nt)	yheT →	putative hydrolase YheT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,484,082	1	.	C	96.5%	301.1 / 2.4	87	coding (881/1023 nt)	yheT	putative hydrolase YheT
Reads supporting (aligned to +/- strand): ref base . (1/2); new base C (42/41); total (43/44)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 103 total aligned reads displayed.

GCTACGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTGGAGGCGAAAT  >  NC_000913/3483944‑3484216

gCTACGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGtct‑‑c                                                                                                                                          <  2:1311582/140‑1 (MQ=255)

 cTACGCCGACGCTATCGACTATTACCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑cc                                                                                                                                         <  2:765400/140‑1 (MQ=255)

   aCGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑cccc                                                                                                                                       <  2:526736/140‑1 (MQ=255)

    cGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑ccccc                                                                                                                                      >  2:715341/1‑140 (MQ=255)

    cGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑ccccc                                                                                                                                      >  1:38461/1‑140 (MQ=255)

    cGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑cccc                                                                                                                                       <  1:728632/139‑1 (MQ=255)

    cGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑cccc                                                                                                                                       >  2:728632/1‑139 (MQ=255)

     gCCGACTCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑ccccc‑c                                                                                                                                    <  1:113596/140‑1 (MQ=255)

     gCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑ccccc‑c                                                                                                                                    <  1:212443/140‑1 (MQ=255)

     gCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑ccccc‑c                                                                                                                                    <  1:1617246/140‑1 (MQ=255)

      ccGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑ccccc‑cc                                                                                                                                   <  1:120078/140‑2 (MQ=255)

      ccGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑ccccc‑cc                                                                                                                                   <  2:38461/140‑2 (MQ=255)

       cGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑ccccc‑ccg                                                                                                                                  <  2:1352456/140‑3 (MQ=255)

        gACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑ccccc‑ccgc                                                                                                                                 <  1:102386/140‑4 (MQ=255)

         aCGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑ccccc‑ccgca                                                                                                                                >  1:1099160/1‑136 (MQ=255)

            cTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCGAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGt                                                                                                                              <  2:901528/140‑1 (MQ=255)

            cTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGt                                                                                                                              <  1:715341/140‑1 (MQ=255)

            cTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGt                                                                                                                              <  2:44425/140‑1 (MQ=255)

            cTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGt                                                                                                                              <  2:697846/140‑1 (MQ=255)

            cTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCAAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGt                                                                                                                              <  2:346008/140‑1 (MQ=255)

             tATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTg                                                                                                                             <  2:1553868/140‑1 (MQ=255)

                    tattatCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATc                                                                                                                      >  2:1342332/1‑140 (MQ=255)

                     attatCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCa                                                                                                                     >  2:1470202/1‑140 (MQ=255)

                      ttatCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCaa                                                                                                                    <  1:1470202/140‑1 (MQ=255)

                       tatCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAac                                                                                                                   >  2:411401/1‑140 (MQ=255)

                       tatCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAac                                                                                                                   >  1:1261851/1‑140 (MQ=255)

                         tCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAactg                                                                                                                 >  1:1179936/1‑140 (MQ=255)

                           gTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGGGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAactgac                                                                                                               >  2:474278/1‑140 (MQ=255)

                            tCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAactgact                                                                                                              >  1:169407/1‑140 (MQ=255)

                             cAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAactga                                                                                                                >  2:537342/1‑137 (MQ=255)

                             cAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAactga                                                                                                                <  1:537342/137‑1 (MQ=255)

                              aGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAActgactga                                                                                                            >  1:40720/1‑140 (MQ=255)

                                tgtAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAAc                                                                                                          >  2:1121694/1‑140 (MQ=255)

                                tgtAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAAc                                                                                                          >  1:111093/1‑140 (MQ=255)

                                tgtAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAAc                                                                                                          >  2:889765/1‑140 (MQ=255)

                                tgtAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAAc                                                                                                          >  1:433752/1‑140 (MQ=255)

                                tgtAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACa                                                                                                         >  2:1534089/1‑140 (MQ=255)

                                  tAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACAt                                                                                                        <  1:842523/140‑1 (MQ=255)

                                   aGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAactga                                                                                                                <  2:1268089/131‑1 (MQ=255)

                                   aGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAactga                                                                                                                >  1:1268089/1‑131 (MQ=255)

                                   aGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATg                                                                                                       <  2:301649/140‑1 (MQ=255)

                                       ccATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCgg                                                                                                   <  2:591241/140‑1 (MQ=255)

                                        cATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGt                                                                                                  <  1:411401/140‑1 (MQ=255)

                                               aTGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTg                                                                                           >  1:1626525/1‑140 (MQ=255)

                                                    gAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATAATCAGGTGATCCCGAAACCGGAAAGTCT‑‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTa                                                                                     <  1:807890/140‑1 (MQ=255)

                                                     aaCCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTa                                                                                     <  2:1261851/140‑1 (MQ=255)

                                                     aaCCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTa                                                                                     >  2:614237/1‑140 (MQ=255)

                                                     aaCCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTa                                                                                     <  2:1171220/140‑1 (MQ=255)

                                                     aaCCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTa                                                                                     <  2:1099160/140‑1 (MQ=255)

                                                      aCCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTAt                                                                                    >  2:112530/1‑140 (MQ=255)

                                                       ccGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTAtt                                                                                   >  1:1245889/1‑140 (MQ=255)

                                                         ggATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTgg                                                                                 >  2:377813/1‑140 (MQ=255)

                                                         ggATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTgg                                                                                 <  2:1176505/140‑1 (MQ=255)

                                                         ggATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTgg                                                                                 <  1:1342332/140‑1 (MQ=255)

                                                         ggATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTgg                                                                                 <  2:1404991/140‑1 (MQ=255)

                                                          gATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGc                                                                                <  1:1121694/140‑1 (MQ=255)

                                                          gATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGc                                                                                <  1:403056/140‑1 (MQ=255)

                                                           aTCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑g                                                                              <  1:1448956/140‑1 (MQ=255)

                                                            tCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑gg                                                                             <  1:889765/140‑1 (MQ=255)

                                                               ccAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTg                                                                                           <  2:293036/124‑1 (MQ=255)

                                                               ccAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTg                                                                                           >  1:293036/1‑124 (MQ=255)

                                                               ccAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTAc                                                                          >  1:1083827/1‑140 (MQ=255)

                                                               ccAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTAc                                                                          >  2:263965/1‑140 (MQ=255)

                                                                       aCGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑gg                                                                             <  2:1339475/129‑1 (MQ=255)

                                                                       aCGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑gg                                                                             >  1:1339475/1‑129 (MQ=255)

                                                                       aCGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTc                                                                 >  1:1261162/1‑140 (MQ=255)

                                                                       aCGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTc                                                                 <  1:1107219/140‑1 (MQ=255)

                                                                       aCGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CCTc                                                                 >  1:761407/1‑140 (MQ=255)

                                                                            gATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑CCCCCTCGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCg                                                            <  2:1179936/140‑1 (MQ=255)

                                                                             attattCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGc                                                           <  1:112530/140‑1 (MQ=255)

                                                                             attattCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGGACATTA‑CTTCATcccc                                                           >  2:1305835/1‑138 (MQ=255)

                                                                                  tCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTCCCCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAAt                                                       <  2:819966/140‑1 (MQ=255)

                                                                                      gCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGc                                                  <  1:1598501/140‑1 (MQ=255)

                                                                                       ccAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCt                                                 >  1:287166/1‑140 (MQ=255)

                                                                                       ccAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGGAAAATA‑ATTCATCCCCAAAAGTGGcg                                                 >  2:1000385/1‑139 (MQ=255)

                                                                                       ccAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑CGTACATTA‑CTTCATCCGCAAATGTGGCt                                                 >  2:1171876/1‑140 (MQ=255)

                                                                                           aGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑ACTCCTCCCCCAAAGTGGCTgggg                                             >  2:150837/1‑138 (MQ=255)

                                                                                                gacagTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACg                                        <  1:1267769/136‑1 (MQ=255)

                                                                                                aTCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACg                                        <  2:1245889/140‑1 (MQ=255)

                                                                                                aTCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CCTCATCCGCAAATGTGGCTGGAGTCACg                                        <  2:761407/140‑1 (MQ=255)

                                                                                                aTCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACAATA‑ATTTATCCCCCAAAGTGGGTGGGGGCAcc                                        >  2:1598501/1‑139 (MQ=255)

                                                                                                       tATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGGACATTA‑CTTCATCCGCCAAAGTGGCTGGGGGCACGCCTTCCt                                 >  1:572343/1‑140 (MQ=255)

                                                                                                         tGGATCATCAGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGa                               <  2:433752/140‑1 (MQ=255)

                                                                                                         tGGATCATCAGGTGATCCCGAAACCGGAAAGTCTA‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGa                               <  1:1653286/140‑1 (MQ=255)

                                                                                                               atcaGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTT‑CTTCATCCGCCAAAGTGGGTGGGGGCACCCCTTCCTGGCTGGtt                         >  1:1085277/1‑140 (MQ=255)

                                                                                                               atcaGGTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGtt                         <  1:1129673/140‑1 (MQ=255)

                                                                                                                   ggTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTaaca                     <  1:150837/140‑1 (MQ=255)

                                                                                                                    gTGATCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGGACATTATTTTCTTCCCCAAATTTGGGTGGGGGAAGCCATTCTTGCCTGGTTaaaa                     >  2:489710/1‑138 (MQ=255)

                                                                                                                       aTCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGt                 <  1:1564304/140‑1 (MQ=255)

                                                                                                                        tCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGTC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTa                >  2:1340140/1‑140 (MQ=255)

                                                                                                                        tCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACAATA‑CTTTATCCCCAAAATTGGGTGGGGGCACGCAATTCCGACCGGTTAAAAAAGTa                >  2:1554273/1‑140 (MQ=255)

                                                                                                                        tCCCGAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGGAAATTA‑CTTTATCCCCAAATGGGGGTCGGGGCACACATTTCTCGCAGGGTAACAACCTa                >  2:1061956/1‑140 (MQ=255)

                                                                                                                            gAAACCGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTg            <  1:489710/140‑1 (MQ=255)

                                                                                                                                 cGGAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGCGGGAAAATTA‑CTTCTTCCCCAAAAGGGGCTGGGGGCCCCCATTCCTTCCTGGTTAAAAACGAATCTGgggg        >  2:700539/1‑140 (MQ=255)

                                                                                                                                  ggAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTGGAGGCg      <  2:287166/140‑1 (MQ=255)

                                                                                                                                  ggAAAGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTGGAGGCg      <  1:263965/140‑1 (MQ=255)

                                                                                                                                    aaaGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTggttgttaa    <  1:1554273/140‑8 (MQ=255)

                                                                                                                                    aaaGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTGGAGGCGaa    <  1:130430/140‑1 (MQ=255)

                                                                                                                                    aaaGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGAAAAATT‑CTTTATCCGCAGATTTGGGTGGGGGCACGCCTTCCTTGCTGGGTAACAACCTATCTTgcggcgca    >  2:1479865/1‑138 (MQ=255)

                                                                                                                                      aGTCTC‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTGGAGGCGAAAt  <  2:1626525/140‑1 (MQ=255)

GCTACGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCT‑‑CCCCC‑CGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGC‑GGTACATTA‑CTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTGGAGGCGAAAT  >  NC_000913/3483944‑3484216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`