| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,920,015 | (T)5→6 | coding (389/534 nt) | atpH ← | ATP synthase F1 complex subunit delta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,920,010 | 1 | . | T | 98.9% | 320.7 / ‑3.8 | 91 | coding (394/534 nt) | atpH | ATP synthase F1 complex subunit delta |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base T (48/42); total (49/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.23e-01 | |||||||||||
TGCAAGACGTCTGCAAGGCGCTCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACG‑TTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGAACATCCGGGAGCGCG > NC_000913/3919877‑3920143 | tGCAAGACGTCTGCAAGGCGCTCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACG‑tttttt > 2:1605371/1‑139 (MQ=255) cAAGACGTCTGCAAGGCGCTCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACG‑ttttttcc > 2:922227/1‑137 (MQ=255) cAAGACGTCTGCAAGGCGCTCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACG‑ttttttcc > 1:826261/1‑137 (MQ=255) cAAGACGTCTGCAAGGCGCTCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACG‑ttttttcc > 1:272145/1‑137 (MQ=255) aCGTCTGCAAGGCGCTCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCg < 1:845331/140‑1 (MQ=255) gcgcTCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAAtt < 2:125453/140‑1 (MQ=255) cTCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTc > 1:1688068/1‑140 (MQ=255) cTCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTc > 1:1564910/1‑140 (MQ=255) tCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTcg > 1:82823/1‑140 (MQ=255) aaGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTcgcg < 2:844569/140‑1 (MQ=255) aaGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTcgcg < 2:539725/140‑1 (MQ=255) gacgacCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAg < 2:675333/140‑1 (MQ=255) cgacCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCt < 1:1025373/140‑1 (MQ=255) cgacCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCt < 2:826261/140‑1 (MQ=255) acCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCtgt < 2:272145/140‑1 (MQ=255) cgcgTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCtgttg > 2:414458/1‑140 (MQ=255) cGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACt < 2:164212/140‑1 (MQ=255) tCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCgg < 1:651311/140‑1 (MQ=255) cATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGaa < 2:1668905/140‑1 (MQ=255) atatCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGaaa < 2:82823/140‑1 (MQ=255) tatCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCgg > 1:1615262/1‑130 (MQ=255) tatCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCgg < 2:1615262/130‑1 (MQ=255) caacACCCGGTCGGATGATAACGCCTGCCATTACAGACTTTTCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAAt < 2:846009/137‑1 (MQ=255) atCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATg > 2:1308769/1‑140 (MQ=255) atCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATg > 1:841798/1‑140 (MQ=255) atCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATg > 2:1507682/1‑140 (MQ=255) ccGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTc > 2:1653085/1‑140 (MQ=255) ccGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTc > 1:690022/1‑140 (MQ=255) gCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTa > 1:1581335/1‑140 (MQ=255) cTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTAc > 2:1408150/1‑140 (MQ=255) tCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTAcc > 2:545489/1‑140 (MQ=255) cGGATGATAACGCCTGCCATTACAGGCTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTGAGTGCGGCAGCGGAAATGACGTCTACCt > 2:1257806/1‑140 (MQ=255) cGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGGAATGACGTCTACCt > 2:1054830/1‑140 (MQ=255) cGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCt > 1:730992/1‑140 (MQ=255) cGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCt < 2:356499/140‑1 (MQ=255) cGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCt > 2:1428777/1‑140 (MQ=255) gatAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCg > 1:646335/1‑140 (MQ=255) aaCGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACGTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTa > 2:1163458/1‑140 (MQ=255) cGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGc < 2:646335/140‑1 (MQ=255) gCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGcc > 1:1020273/1‑140 (MQ=255) ccTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCct < 1:1163458/140‑1 (MQ=255) cTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCg < 2:303205/132‑1 (MQ=255) cTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCg > 1:303205/1‑132 (MQ=255) cTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGt < 2:31947/134‑1 (MQ=255) cTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGt > 1:31947/1‑134 (MQ=255) cTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCctc > 1:586756/1‑140 (MQ=255) cTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCctc > 2:1236059/1‑140 (MQ=255) cTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCctc > 2:905105/1‑140 (MQ=255) tGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCctca > 2:507651/1‑140 (MQ=255) ccATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCctcact < 1:1428777/140‑1 (MQ=255) tACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACg < 2:1020273/140‑1 (MQ=255) aGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCa < 2:1487282/140‑1 (MQ=255) gACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCAc > 2:675128/1‑140 (MQ=255) aCTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACg < 2:841798/140‑1 (MQ=255) aCTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACg < 1:545489/140‑1 (MQ=255) cTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCctcac > 2:533013/1‑129 (MQ=255) cTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCctcac < 1:533013/129‑1 (MQ=255) cTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGc > 2:1150953/1‑140 (MQ=255) ttATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCa < 2:1688068/140‑1 (MQ=255) ttATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCa > 2:1184924/1‑140 (MQ=255) ttATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCa > 1:439191/1‑140 (MQ=255) ttATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCa < 2:1034155/140‑1 (MQ=255) ttATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCa > 1:1042102/1‑140 (MQ=255) ttATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCa > 1:1130907/1‑140 (MQ=255) tATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAg < 2:580861/140‑1 (MQ=255) tATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAg < 2:586756/140‑1 (MQ=255) aTCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAgg > 2:419561/1‑140 (MQ=255) tCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGt > 1:447738/1‑140 (MQ=255) tCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGt > 1:753734/1‑140 (MQ=255) aTTTTGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGaa < 2:1564910/140‑1 (MQ=255) tttGCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATa > 2:336209/1‑140 (MQ=255) gCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAAc < 1:70871/140‑1 (MQ=255) gCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAAc < 2:439191/140‑1 (MQ=255) gCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAAc < 1:1150953/140‑1 (MQ=255) gCAATTCAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAAc < 1:1605371/140‑1 (MQ=255) cAGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTcc > 1:63054/1‑140 (MQ=255) aGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCa < 2:730992/140‑1 (MQ=255) aGCTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCa < 1:1408150/140‑1 (MQ=255) aGCTAAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCa < 2:1346698/140‑1 (MQ=255) cTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAgg < 1:158226/122‑1 (MQ=255) cTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAgg > 2:158226/1‑122 (MQ=255) cTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGa > 1:1144851/1‑140 (MQ=255) cTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGa < 1:927517/140‑1 (MQ=255) cTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGa > 2:927517/1‑140 (MQ=255) cTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGa > 1:1468865/1‑140 (MQ=255) cTTAACTTTGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCA‑GTGAATAAACTGCTCCAGaa > 2:977575/1‑140 (MQ=255) tGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCATGCAGGTGAATAAACTGCTCCAGAACATCCgg > 2:593557/1‑140 (MQ=255) tGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGAACATCCgg > 1:832176/1‑140 (MQ=255) tGCGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGAACATCCgg > 1:879378/1‑140 (MQ=255) cGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGAACATCCGGGa < 2:690022/140‑1 (MQ=255) cGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGAACATCCGGGa > 1:1046333/1‑140 (MQ=255) cGTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGAACATCCGGGa > 2:161529/1‑140 (MQ=255) cGTGACAGACG‑TTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGAACATCCGGGAg > 1:1147523/1‑140 (MQ=255) gTGACAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGAACATCCGGGAg < 1:686026/140‑1 (MQ=255) cAGACGTTTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGAACATCCGGGAGcgcg < 2:1144851/140‑1 (MQ=255) | TGCAAGACGTCTGCAAGGCGCTCAAGACGACCGCGTACGCTGCCATCAATGACCATATCACCCGCTCGGATGATAACGCCTGCCATTACAGACTTATCGATTTTGCAATTCAGCTTAACTTTGCGTGACAGACG‑TTTTTCCATCGCAGCAGAAATTTTCGCGAGCTGTTGTTCACTCAGTGCGGCAGCGGAAATGACGTCTACCTCAGCGGTAGCCTCACTCACGGCACGCAGGTGAATAAACTGCTCCAGAACATCCGGGAGCGCG > NC_000913/3919877‑3920143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |