| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,303,905 | (A)7→8 | coding (1/489 nt) | eco → | serine protease inhibitor ecotin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,303,898 | 1 | . | A | 96.7% | 314.2 / 1.6 | 90 | intergenic (+128/‑7) | yojO/eco | uncharacterized protein YojO/serine protease inhibitor ecotin |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base A (50/37); total (52/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGAATTTAACACTAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGC‑‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATGAAGCGTCA > NC_000913/2303762‑2304032 | aGAATTTAACACTAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGC‑‑aaa > 1:1013347/1‑140 (MQ=255)aGAATTTAACACTAAAAAAGCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGC‑‑aaa > 2:126136/1‑140 (MQ=255) aaCACTAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGC‑‑aaaaaaaatg > 2:1073479/1‑137 (MQ=255) aaCACTAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGC‑‑aaaaaaaatg > 1:1468699/1‑137 (MQ=255) cacTAAAAAAGCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGC‑‑aaaaaaaatgaa < 1:126136/140‑6 (MQ=255) tAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGAc > 2:1482475/1‑140 (MQ=255) tAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGAc < 1:905089/140‑1 (MQ=255) tAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGAc > 1:871929/1‑140 (MQ=255) agagCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCAtt < 1:929434/140‑1 (MQ=255) gCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCAAAAAAAAATGAAGACCATTCt < 1:874139/140‑1 (MQ=255) cAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTAc > 2:98562/1‑140 (MQ=255) cAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTAc > 1:950995/1‑140 (MQ=255) ggTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCt > 1:1093640/1‑140 (MQ=255) ggTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCt > 1:727262/1‑140 (MQ=255) ggTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCt > 1:1500044/1‑140 (MQ=255) gTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTg < 2:736622/140‑1 (MQ=255) aTTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTa > 2:943586/1‑140 (MQ=255) tCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGt < 1:989402/140‑1 (MQ=255) cTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGtt < 2:727262/140‑1 (MQ=255) cTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGtt > 2:199701/1‑140 (MQ=255) cTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCGTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGC‑‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGttt > 2:1173262/1‑140 (MQ=255) aaTGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGc > 1:1405760/1‑140 (MQ=255) cTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCttt > 1:973414/1‑140 (MQ=255) aGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTa < 1:453699/140‑1 (MQ=255) gTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTAc < 1:217059/140‑1 (MQ=255) ttCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACt > 2:843308/1‑140 (MQ=255) cATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATCGTTTGCCGCTTTCGCTACCACTTc < 1:98562/140‑1 (MQ=255) aaTTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGggc > 2:206322/1‑140 (MQ=255) taataaATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGggcggc < 2:157221/140‑1 (MQ=255) aaTCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGaaa < 1:843308/140‑1 (MQ=255) tgaATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCa < 2:1228132/140‑1 (MQ=255) aaTATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGc < 2:1092527/140‑1 (MQ=255) tatGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGTAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCa > 2:114622/1‑140 (MQ=255) tGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACt > 1:646617/1‑140 (MQ=255) tGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACt > 2:502000/1‑140 (MQ=255) tAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGaa > 2:1700358/1‑123 (MQ=255) tAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGaa < 1:1700358/123‑1 (MQ=255) tAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCg < 2:904190/127‑1 (MQ=255) tAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCg > 1:904190/1‑127 (MQ=255) tAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGa > 2:373800/1‑140 (MQ=255) aCCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGaaa > 1:344971/1‑140 (MQ=255) ccTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGaaaa > 2:43136/1‑140 (MQ=255) ttCAGCGACATCATCGGTGAAAACCTATAAATGTAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCa > 2:1193749/1‑130 (MQ=255) ttCAGCGACATCATCGGTGAAAACCTATAAATGTAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCa < 1:1193749/130‑1 (MQ=255) ttCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCa > 2:911042/1‑130 (MQ=255) ttCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCa < 1:911042/130‑1 (MQ=255) ttCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGaaaaaa > 2:421771/1‑140 (MQ=255) ttCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGaaaaaa > 1:1331861/1‑140 (MQ=255) ttCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGaaaaaa > 2:535305/1‑140 (MQ=255) ttCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGC‑‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGTTTTCGCTACCGCTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAAt < 1:1173262/140‑1 (MQ=255) tCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAAt > 2:1112667/1‑140 (MQ=255) tCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAAt > 2:1176075/1‑140 (MQ=255) tCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAAt > 1:1577274/1‑140 (MQ=255) cAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGc > 1:160026/1‑126 (MQ=255) cAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGc < 2:160026/126‑1 (MQ=255) cAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATc > 1:1329300/1‑140 (MQ=255) cAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATc > 1:1450626/1‑140 (MQ=255) cAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATc > 1:1416951/1‑140 (MQ=255) aGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATcg > 1:218512/1‑140 (MQ=255) aGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATcg > 1:1337003/1‑140 (MQ=255) gCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATcgc > 1:680189/1‑140 (MQ=255) cGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATcgcg < 1:199701/140‑1 (MQ=255) cGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATcgcg < 1:256186/140‑1 (MQ=255) aCATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGcc < 2:1329300/140‑1 (MQ=255) catcatCGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCt < 2:1577274/140‑1 (MQ=255) atcatcGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATcgc < 1:1399387/135‑1 (MQ=255) atcatcGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATcgc > 2:1399387/1‑135 (MQ=255) tcatcGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCt < 1:1010672/138‑1 (MQ=255) tcatcGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCt > 2:1010672/1‑138 (MQ=255) catcGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTAt > 2:191837/1‑140 (MQ=255) cGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTATCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCca < 2:1479317/140‑1 (MQ=255) cGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCca < 2:963133/140‑1 (MQ=255) cGGTGAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCca < 1:1624458/140‑1 (MQ=255) gAAAACCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAg < 2:973414/140‑1 (MQ=255) gAAAACCTATAAATGAAGAAGGAAAGC‑‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGc > 1:805435/1‑140 (MQ=255) aaaaCCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCcac > 2:1139444/1‑136 (MQ=255) aaaaCCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCcac < 1:1139444/136‑1 (MQ=255) aaCCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCt > 2:819088/1‑127 (MQ=255) aaCCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCt < 1:819088/127‑1 (MQ=255) aaCCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTg > 2:734461/1‑140 (MQ=255) aCCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATcgc > 1:377166/1‑122 (MQ=255) aCCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATcgc < 2:377166/122‑1 (MQ=255) aCCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGa > 1:1409255/1‑140 (MQ=255) aCCTATAAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGa < 1:43136/140‑1 (MQ=255) taAATGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAg > 1:430141/1‑140 (MQ=255) aTGAAG‑AGGCAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTCCCACTCCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGAt < 1:1077639/140‑1 (MQ=255) tGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGAt > 2:1539051/1‑140 (MQ=255) tGAAGAAGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGAt < 1:983289/140‑1 (MQ=255) gaagaaGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATg < 1:373800/140‑1 (MQ=255) gaagaaGGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATg < 1:1112667/140‑1 (MQ=255) aagaagGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATGa < 2:1013347/140‑1 (MQ=255) agaagGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCTGCCTGGGCGGCAGAAAGCGTCCAACCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATGaa > 2:884010/1‑140 (MQ=255) agaagGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAg > 1:553166/1‑124 (MQ=255) agaagGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAg < 2:553166/124‑1 (MQ=255) agaagGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATGaa > 1:1217060/1‑140 (MQ=255) agaagGAAAGCA‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATGaa > 1:1144830/1‑140 (MQ=255) aaaaGA‑‑AAAAAAATGAAGTCCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATGAAGCGTCa < 2:503253/139‑1 (MQ=255) | AGAATTTAACACTAAAAGAGCAGGTAAAATTGTCTGAATGTTCTTTAAGTTATTCATAAAGCAAATTAATAAATCTGATGAATATGTTAACCTTCAGCGACATCATCGGTGAAAACCTATAAATGAAGAAGGAAAGC‑‑AAAAAAATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATGAAGCGTCA > NC_000913/2303762‑2304032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |