Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,857,096 Δ2,538 bp coding (4‑2541/2562 nt) mutS → DNA mismatch repair protein MutS

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2857096 2859633 2538 122 [0] [0] 123 mutS DNA mismatch repair protein MutS

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 28570950 (0.000)121 (1.210) 66/276 0.2 100% coding (3/2562 nt) mutS DNA mismatch repair protein MutS
?NC_000913 2859634 = 0 (0.000)coding (2542/2562 nt) mutS DNA mismatch repair protein MutS

Only 100 of 121 total aligned reads displayed.

AGCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2856962‑2857095
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACA  >  NC_000913/2859634‑2859771
                                                                                                                                                                                                                                                                                
AGCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTG                                                                                                                                      >  1:994123/1‑140
 GCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGA                                                                                                                                     <  2:9451/140‑1
       AGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCC                                                                                                                               <  1:901666/140‑1
       AGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCC                                                                                                                               <  2:280649/140‑1
       AGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCC                                                                                                                               <  2:251811/140‑1
       AGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAA                                                                                                                                    >  2:1622387/1‑135
        GAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCT                                                                                                                              <  1:812140/140‑1
        GAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCT                                                                                                                              <  1:1214742/140‑1
          ACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAGAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAGCCCCATGCGCTTGAAGAGCCTGG                                                                                                                            <  2:1107330/140‑1
          ACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGG                                                                                                                            <  1:1101971/140‑1
           CTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATGACCCCATGCGCTTGAAGAG                                                                                                                                 >  2:1577346/1‑134
           CTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATGACCCCATGCGCTTGAAGAG                                                                                                                                 <  1:1577346/134‑1
                   TCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGG                                                                                                                            <  2:1404566/131‑1
                   TCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGG                                                                                                                            >  1:1404566/1‑131
                     GCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAA                                                                                                                 <  2:56615/140‑1
                            ctCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGA                                                                                                          <  2:1571280/138‑1
                            CCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGA                                                                                                          <  2:1058706/140‑1
                             CCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAATGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGAT                                                                                                         <  2:964091/140‑1
                                      GATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTG                                                                                                <  2:994123/140‑1
                                        TTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCT                                                                                              <  2:1252702/140‑1
                                            CTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCG                                                                                          >  1:1160737/1‑140
                                               cgattTCATGTGCGATTTATGTGATTGCAACGAAAATAAAAACCATCACTCCCCGATTAATATCAGGGAACCGTGCATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGA                                                                                       <  2:1276815/135‑1
                                               CGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGA                                                                                       >  1:538576/1‑140
                                               CGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGA                                                                                       >  1:371065/1‑140
                                                 GTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAAT                                                                                     >  2:445031/1‑140
                                                  TATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATA                                                                                    <  1:245547/140‑1
                                                    TCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATT                                                                                  >  1:996193/1‑140
                                                       TGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAGCCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGA                                                                                       >  2:1178942/1‑132
                                                       TGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAAC                                                                               >  1:1247499/1‑140
                                                       TGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAAC                                                                               >  2:909069/1‑140
                                                       TGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGA                                                                                       <  1:1178942/132‑1
                                                           CGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACA                                                                           >  2:220970/1‑140
                                                           CGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACA                                                                           >  1:983713/1‑140
                                                                TATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGA                                                                      >  2:1417551/1‑140
                                                                    TGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAA                                                                  <  2:1253774/140‑1
                                                                     GATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAAT                                                                 <  1:445031/140‑1
                                                                       TTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAA                                                               <  1:444613/140‑1
                                                                        TACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAA                                                              >  1:539731/1‑140
                                                                        TACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTG                                                                       >  1:813836/1‑131
                                                                        TACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTG                                                                       <  2:813836/131‑1
                                                                        TACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATAATAAC                                                                               >  1:1689542/1‑123
                                                                         ACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAA                                                             <  2:1247499/140‑1
                                                                          CAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAAT                                                            >  1:181508/1‑140
                                                                          CAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAAT                                                            >  2:1269748/1‑140
                                                                            ACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAA                                                          >  1:1092729/1‑140
                                                                            ACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAA                                                          >  1:392994/1‑140
                                                                              GAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAA                                                        <  2:538576/140‑1
                                                                              GAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAA                                                        <  2:983713/140‑1
                                                                               AAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAA                                                       <  1:1390514/140‑1
                                                                                AAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAAC                                                      >  2:818483/1‑140
                                                                                 AATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACA                                                     <  2:1656659/140‑1
                                                                                 AATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACA                                                     <  1:142704/140‑1
                                                                                 AATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACA                                                     <  2:48230/140‑1
                                                                                 AATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACA                                                     <  2:445792/140‑1
                                                                                 AATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACA                                                     <  2:1365485/140‑1
                                                                                   TAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACC                                                   <  1:694157/140‑1
                                                                                   TAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACC                                                   <  2:135255/140‑1
                                                                                    AAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCC                                                  <  1:909069/140‑1
                                                                                    AAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCC                                                  <  2:290699/140‑1
                                                                                      AAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAANTGACGAATANAATAAAAACACCCTG                                                <  1:1261820/140‑1
                                                                                      AAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTG                                                <  1:1120195/140‑1
                                                                                            TCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAAT                                          >  1:1274842/1‑140
                                                                                             CACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACA                                                     <  1:1322583/128‑1
                                                                                             CACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACA                                                     >  2:1322583/1‑128
                                                                                              ACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAG                                        <  2:1381504/140‑1
                                                                                                ACCCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGA                                      <  2:889366/140‑1
                                                                                                  CCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACCCCCTGTATAATAGGAAA                                    <  2:301439/140‑1
                                                                                                  CCCATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAA                                    <  1:1128678/140‑1
                                                                                                    CATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACC                                                   <  1:458102/123‑1
                                                                                                    CATTTAATATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACC                                                   >  2:458102/1‑123
                                                                                                      TTTAATATCAGGTAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTT                                >  2:1010163/1‑140
                                                                                                        TAATATCAGCCAACCGGACATACCCCTACCCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACCCCCTGTATAATAGGAAAGCTTAT                              <  2:1185769/140‑1
                                                                                                            ATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTA                          <  2:181508/140‑1
                                                                                                            ATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTA                          >  2:573469/1‑140
                                                                                                            ATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTA                          >  2:270370/1‑140
                                                                                                            ATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTA                          <  2:1662186/140‑1
                                                                                                            ATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTA                          <  2:1430054/140‑1
                                                                                                            ATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTA                          >  1:308563/1‑140
                                                                                                            ATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTA                          <  1:502560/140‑1
                                                                                                            ATCAGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTA                          >  2:1258120/1‑140
                                                                                                               AGGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAG                       >  1:796175/1‑140
                                                                                                                GGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGG                      >  1:908829/1‑140
                                                                                                                GGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGG                      >  1:526096/1‑140
                                                                                                                GGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTA                          >  1:942645/1‑136
                                                                                                                GGGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTA                          <  2:942645/136‑1
                                                                                                                 GGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGG                     >  1:1591275/1‑140
                                                                                                                 GGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGG                     >  2:1154424/1‑140
                                                                                                                 GGAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGG                     >  2:1241449/1‑140
                                                                                                                  tAACCGGACATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGT                    <  1:1010163/139‑1
                                                                                                                          CATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCAT            <  1:1214295/140‑1
                                                                                                                           ATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATG           <  1:818483/140‑1
                                                                                                                           ATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATG           <  1:1154424/140‑1
                                                                                                                           ATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATG           <  1:1241449/140‑1
                                                                                                                           ATAACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATG           <  1:220970/140‑1
                                                                                                                             AACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCC         >  2:934975/1‑140
                                                                                                                             AACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCC         <  2:1160737/140‑1
                                                                                                                             AACCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCC         >  2:239742/1‑140
                                                                                                                               CCCCATGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCAT       >  2:977288/1‑140
                                                                                                                                    TGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACA  >  2:802109/1‑140
                                                                                                                                    TGCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACA  >  2:208324/1‑140
                                                                                                                                                                                                                                                                                
AGCATCAAGAACTCGCCGTTCGCTTCTTCCCCTGAAATGATTAACTCCGGTATCATGTGCGCCTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2856962‑2857095
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTACA  >  NC_000913/2859634‑2859771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.