BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 375160	NA (NA)	17 (0.170) +T	13/274	3.8	NA	noncoding (28/34 nt)	other	REP31e
*	?	NC_000913	= 377491	NA (NA)	17 (0.170) +T	13/274	3.8	NA	noncoding (32/34 nt)	other	REP32d
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 169 total aligned reads displayed.

ACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGA  >  NC_000913/375025‑375298

aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATGGCGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATACGGTCt                                                                                                                                          >  2:563281/1‑140 (MQ=11)

aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                                                         >  1:1396626/1‑140 (MQ=37)

aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                                                         >  1:346949/1‑140 (MQ=37)

aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                                                         >  1:297893/1‑140 (MQ=37)

aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                                                         >  2:932029/1‑140 (MQ=37)

aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                                                         >  1:124091/1‑140 (MQ=37)

aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGAGAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTa                                                                                                                                         >  2:1542151/1‑140 (MQ=255)

  gACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACg                                                                                                                                       >  1:430991/1‑140 (MQ=37)

  gACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACg                                                                                                                                       >  1:860131/1‑140 (MQ=37)

  gACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTAcac                                                                                                                                      >  2:713435/1‑138 (MQ=255)

  cgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                                                        <  1:1283422‑M1/64‑1 (MQ=255)

  cgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                                                        <  2:497141‑M1/64‑1 (MQ=255)

  cgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                                                        <  2:384103‑M1/64‑1 (MQ=255)

  cgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                                                        <  2:450483‑M1/64‑1 (MQ=255)

   gactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACg                                                                                                                                       <  2:1599046‑M1/65‑1 (MQ=255)

      gCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTAcacttc                                                                                                                                   <  2:299672/140‑6 (MQ=255)

        cGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAcacttcgc                                                                                                                                 <  1:624317/140‑8 (MQ=255)

         ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGTAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                                                                                <  2:1498805/140‑1 (MQ=255)

         ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                                                                                <  2:364549/140‑1 (MQ=40)

         ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                                                                                <  1:94155/140‑1 (MQ=40)

         ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                                                                                <  2:1600186/140‑1 (MQ=40)

         ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                                                                                <  1:508516/140‑1 (MQ=40)

         cggatgtggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgc                                                                                                                                 >  2:622416‑M1/70‑140 (MQ=255)

         cggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgc                                                                                                                                 >  2:753989‑M1/70‑140 (MQ=255)

         cggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgc                                                                                                                                 >  1:450483‑M1/70‑140 (MQ=255)

          ggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                                                                                >  2:232711‑M1/69‑140 (MQ=255)

          ggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                                                                                >  1:1599046‑M1/69‑140 (MQ=255)

             gcggcgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgag                                                                                                                            <  2:540391/140‑1 (MQ=255)

                 cgTGAACGCCTTATCCGGCCTACACTTCGC‑CCGTAAGCCGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAAttt                                                                                                                       >  1:1684302/1‑140 (MQ=11)

                       cGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAgg                                                                                                                  <  1:1222450/140‑1 (MQ=255)

                        gCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGc                                                                                                                 <  2:574195/140‑1 (MQ=255)

                         ccTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGcc                                                                                                                >  1:289484/1‑140 (MQ=255)

                               tccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                                                                           <  2:475405‑M1/77‑1 (MQ=255)

                               tccggtctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                                                                                           >  1:475405‑M1/48‑124 (MQ=255)

                               ccGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                          <  2:346949/140‑1 (MQ=255)

                               ccGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                          <  2:289484/140‑1 (MQ=255)

                               ccGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                          <  2:814788/140‑1 (MQ=255)

                                cGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                         <  2:834740/140‑1 (MQ=255)

                                 ggCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGa                                                                                                        <  2:1368058/140‑1 (MQ=255)

                                    tctacacttcgcccataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGAcg                                                                                                      <  2:1293199‑M1/98‑1 (MQ=255)

                                      aCGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑t                                                                                                  <  2:780030/140‑1 (MQ=255)

                                            ggCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGt                                                                                            >  1:301126/1‑140 (MQ=40)

                                            ggCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGt                                                                                            >  2:1220994/1‑140 (MQ=40)

                                               gcgGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                                                                                         >  2:33888/1‑125 (MQ=255)

                                                  gtaagccgtaggcctgataagacgcgcaAAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                          <  2:237934‑M1/94‑1 (MQ=255)

                                                  gtaagccgtaggcctgataagacgcgcaAAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                                                          <  2:1411076‑M1/94‑1 (MQ=255)

                                                  gtaagccgtaggcctgataagacgcgcaAAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                                                                                       <  2:1490465‑M1/112‑1 (MQ=255)

                                                  gtaagccgtaggcctgataagacgcgcaAAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                                                                                       <  1:51038‑M1/112‑1 (MQ=255)

                                                  gtaagccgtaggcctgataagacgcgcaAAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                                                                                       <  1:1132503‑M1/112‑1 (MQ=255)

                                                  gtaagccgtaggcctgataagacgcgcaAAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                                                                                       <  1:276122‑M1/112‑1 (MQ=255)

                                                  gtaagccgTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCAT‑‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                      >  1:777514/8‑140 (MQ=11)

                                                  gtaagccgTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCAT‑‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCCGATAAGACGCG‑TTAGCGTCGCATc                                                                                      >  2:1354051/8‑140 (MQ=11)

                                                  gtaagccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                      >  1:1515119/8‑140 (MQ=255)

                                                  gtaagccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                      >  1:16140/8‑140 (MQ=255)

                                                  gtaagccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                      >  2:456704/8‑140 (MQ=255)

                                                  ataaaccgtaggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCAt                                                                                       <  1:1486285‑M1/112‑1 (MQ=255)

                                                  ataaaccgTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATc                                                                                      >  2:598195/8‑140 (MQ=255)

                                                    aaTTGGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAg                                                                                    <  2:1272152/140‑1 (MQ=255)

                                                            ggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTg                                                                             >  2:137303‑M1/19‑140 (MQ=255)

                                                            ggcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTg                                                                             >  1:1293199‑M1/19‑140 (MQ=255)

                                                            ggcctgataagacgcgcaAAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTg                                                                             >  2:657362‑M1/19‑140 (MQ=255)

                                                            ggCCTGATAAGACGCGCAAAGCGTCGCATCAGGCAT‑‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                            <  1:1668990/140‑1 (MQ=11)

                                                            ggCCTGATAAGACGCGCAAAGCGTCGCATCAGGCAT‑‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCCGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                            <  1:1354051/140‑1 (MQ=11)

                                                            ggCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                            <  2:1230994/140‑1 (MQ=37)

                                                             gcctgataagacgcgcaTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTgc                                                                            >  2:1283422‑M1/18‑140 (MQ=255)

                                                             gCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGAATCAGGCATCTgcg                                                                           >  1:1139518/1‑140 (MQ=37)

                                                                tGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCAc                                                                        >  2:1517661/1‑140 (MQ=34)

                                                                             ttAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATg                                                            >  1:1463260/1‑140 (MQ=34)

                                                                             ttAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATg                                                            >  1:1064145/1‑140 (MQ=34)

                                                                             ttAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATg                                                            <  2:297893/140‑1 (MQ=34)

                                                                             ttAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATg                                                            >  1:693074/1‑140 (MQ=34)

                                                                                  GTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcggcg                                                       <  1:833470‑M1/140‑1 (MQ=255)

                                                                                   TCGCATCAGGCAT‑G‑GCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTa                                                     <  1:224749‑M1/140‑1 (MQ=255)

                                                                                   TCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGt                                                      <  1:1281724‑M1/140‑1 (MQ=255)

                                                                                    CGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTa                                                     <  1:1020073‑M1/140‑1 (MQ=255)

                                                                                     GCATCAGGCAT‑G‑GCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTaaa                                                   <  1:1354954‑M1/140‑1 (MQ=255)

                                                                                     GCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTaa                                                    <  1:104563‑M1/140‑1 (MQ=255)

                                                                                     GCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTACCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTaa                                                    >  2:1248707‑M1/1‑140 (MQ=255)

                                                                                               T‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATc                                          >  1:376916‑M1/1‑140 (MQ=255)

                                                                                               T‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATc                                          >  2:1139518‑M1/1‑140 (MQ=255)

                                                                                               T‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATc                                          >  2:1064145‑M1/1‑140 (MQ=255)

                                                                                                 CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATcc                                         >  2:163785‑M1/1‑140 (MQ=255)

                                                                                                    CGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGc                                      <  1:1480018‑M1/140‑1 (MQ=255)

                                                                                                       aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTa                                   >  2:700940/1‑140 (MQ=11)

                                                                                                       aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGtg                                                     >  2:1464985/1‑121 (MQ=21)

                                                                                                       aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTa                                   >  1:978749/1‑140 (MQ=17)

                                                                                                       ACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTa                                   <  1:163785‑M1/140‑1 (MQ=255)

                                                                                                         GACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACg                                 <  1:1181226‑M1/140‑1 (MQ=255)

                                                                                                           CTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGa                               >  1:583199‑M1/1‑140 (MQ=255)

                                                                                                               cGGATGCGGCGTGAACGCCTTATCCGGTCTACACTTCGC‑CCATAAACCGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                          <  1:1229934/140‑1 (MQ=11)

                                                                                                                ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                          <  2:1004956/140‑1 (MQ=40)

                                                                                                                ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                          <  1:456704/140‑1 (MQ=40)

                                                                                                                ggATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGgcg                          <  2:1424519/140‑1 (MQ=40)

                                                                                                                     cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                     >  1:872978/1‑140 (MQ=40)

                                                                                                                     cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                     <  1:598195/140‑1 (MQ=40)

                                                                                                                     cggcgTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGa                     <  2:1684302/140‑1 (MQ=40)

                                                                                                                          tGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TAAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTg                <  2:1486285/140‑1 (MQ=255)

                                                                                                                            aaCGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTa              <  2:1173790/140‑1 (MQ=40)

                                                                                                                                      ccGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATaa    <  2:1565247/140‑1 (MQ=40)

                                                                                                                                        ggCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGa  <  2:104563/140‑1 (MQ=40)

ACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCAT‑CTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGA  >  NC_000913/375025‑375298

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.