BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,312,177	G→A	R201C (CGC→TGC)	truB ←	tRNA pseudouridine(55) synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,312,177	0	G	A	100.0%	439.0 / NA	123	R201C (CGC→TGC)	truB	tRNA pseudouridine(55) synthase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (56/67); total (56/67)

Only 100 of 126 total aligned reads displayed.

ACTGTCCATTGGCATCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCGCAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGCGAATAAACAGCAATTCA  >  NC_000913/3312040‑3312310

aCTGTCCATTGGCATCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGcaca                                                                                                                                     <  1:526989/140‑1 (MQ=255)

  tGTCCATTGGCATCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAgg                                                                                                                                   <  1:226725/140‑1 (MQ=255)

  tGTCCATTGGCATCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAgg                                                                                                                                   <  2:905885/140‑1 (MQ=255)

    tCCATTGGCATCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTa                                                                                                                                 >  1:1544489/1‑140 (MQ=255)

    tCCATTGGCATCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTa                                                                                                                                 >  1:1496354/1‑140 (MQ=255)

         tGGCATCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATaa                                                                                                                            >  2:1116780/1‑140 (MQ=255)

             aTCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATg                                                                                                                        <  2:1496354/140‑1 (MQ=255)

              tCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATgc                                                                                                                       >  2:1534731/1‑140 (MQ=255)

              tCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATgc                                                                                                                       >  2:863291/1‑140 (MQ=255)

              tCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATgc                                                                                                                       >  2:925001/1‑140 (MQ=255)

               cAGTAATGGACCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATgcg                                                                                                                      <  1:458963/140‑1 (MQ=255)

                aGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATgcgc                                                                                                                     >  1:142956/1‑140 (MQ=255)

                   aaTGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGcc                                                                                                                  <  1:1697247/140‑1 (MQ=255)

                     tGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCcac                                                                                                                >  1:63143/1‑140 (MQ=255)

                     tGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCcac                                                                                                                >  1:591405/1‑140 (MQ=255)

                     tGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCcac                                                                                                                >  2:523677/1‑140 (MQ=255)

                          cAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCg                                                                                                           >  1:340796/1‑140 (MQ=255)

                           aaGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGa                                                                                                          >  1:1054617/1‑140 (MQ=255)

                           aaGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGa                                                                                                          <  2:142956/140‑1 (MQ=255)

                            aGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAg                                                                                                         >  2:908317/1‑140 (MQ=255)

                            aGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAg                                                                                                         >  1:903285/1‑140 (MQ=255)

                                 cTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGttttt                                                                                                    >  2:602325/1‑140 (MQ=255)

                                 cTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGttttt                                                                                                    >  2:1418619/1‑140 (MQ=255)

                                  tCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTc                                                                                                   >  1:1062605/1‑140 (MQ=255)

                                   ccGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCa                                                                                                  <  2:398862/140‑1 (MQ=255)

                                   ccGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCa                                                                                                  >  2:1032495/1‑140 (MQ=255)

                                    cgcgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGa                                                                                                          >  2:1421818/1‑131 (MQ=255)

                                     gcgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCAcc                                                                                                <  2:63143/140‑1 (MQ=255)

                                     gcgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCAcc                                                                                                <  2:3136/140‑1 (MQ=255)

                                     gcgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCAcc                                                                                                <  2:960561/140‑1 (MQ=255)

                                     gcgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCAcc                                                                                                <  1:996038/140‑1 (MQ=255)

                                      cgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGa                                                                                                          <  2:1147409/129‑1 (MQ=255)

                                      cgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGa                                                                                                          >  1:1147409/1‑129 (MQ=255)

                                      cgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCAccc                                                                                               <  1:925001/140‑1 (MQ=255)

                                      cgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCAccc                                                                                               >  2:688287/1‑140 (MQ=255)

                                      cgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCAccc                                                                                               <  1:1195165/140‑1 (MQ=255)

                                      cgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCAccc                                                                                               >  2:64803/1‑140 (MQ=255)

                                      cgGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCAccc                                                                                               >  2:308271/1‑140 (MQ=255)

                                       ggCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCa                                                                                              <  1:308271/140‑1 (MQ=255)

                                       ggCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCa                                                                                              >  2:1143718/1‑140 (MQ=255)

                                       ggCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCa                                                                                              <  1:239567/140‑1 (MQ=255)

                                       ggCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCa                                                                                              >  1:637699/1‑140 (MQ=255)

                                        gCTGGAATATCCTGCTGTTCATCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAg                                                                                             <  2:1544489/140‑1 (MQ=255)

                                        gCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAg                                                                                             <  1:1416676/140‑1 (MQ=255)

                                         cTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAgg                                                                                            <  2:1062605/140‑1 (MQ=255)

                                         cTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAgg                                                                                            <  1:1116780/140‑1 (MQ=255)

                                           ggAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGtc                                                                                          <  1:602325/140‑1 (MQ=255)

                                           ggAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGtc                                                                                          <  1:523677/140‑1 (MQ=255)

                                           ggAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGtc                                                                                          <  2:1070551/140‑1 (MQ=255)

                                           ggAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGtc                                                                                          <  2:903285/140‑1 (MQ=255)

                                             aaTATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGtcat                                                                                        <  1:908317/140‑1 (MQ=255)

                                                  ccTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAatg                                                                                   <  1:688287/140‑1 (MQ=255)

                                                    tgctgTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAatgat                                                                                 <  2:1441750/140‑1 (MQ=255)

                                                    tgctgTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAatgat                                                                                 <  2:1252663/140‑1 (MQ=255)

                                                     gctgTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAatgatg                                                                                <  1:1032495/140‑1 (MQ=255)

                                                      ctgTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCAcc                                                                                                >  2:641229/1‑123 (MQ=255)

                                                      ctgTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATgg                                                                               >  2:1592661/1‑140 (MQ=255)

                                                      ctgTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATgg                                                                               >  2:917577/1‑140 (MQ=255)

                                                       tgTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGt                                                                              <  2:1054617/140‑1 (MQ=255)

                                                       tgTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGt                                                                              <  1:950352/140‑1 (MQ=255)

                                                         ttCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAgg                                                                                            >  1:187513/1‑124 (MQ=255)

                                                         ttCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAgg                                                                                            <  2:187513/124‑1 (MQ=255)

                                                         ttCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGc                                                                            <  2:710750/140‑1 (MQ=255)

                                                           cAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGtc                                                                                          <  1:157861/124‑1 (MQ=255)

                                                           cAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCgg                                                                          >  1:1574930/1‑140 (MQ=255)

                                                            aGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGa                                                                         <  2:1250348/140‑1 (MQ=255)

                                                                tGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTg                                                                             <  1:1333670/132‑1 (MQ=255)

                                                                tGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTg                                                                             >  2:1333670/1‑132 (MQ=255)

                                                                tGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGAtata                                                                     <  1:64803/140‑1 (MQ=255)

                                                                   tCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGt                                                                  >  2:625116/1‑140 (MQ=255)

                                                                       caaGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGt                                                                  <  1:1263623/136‑1 (MQ=255)

                                                                       caaGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGt                                                                  >  2:1263623/1‑136 (MQ=255)

                                                                             cACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAg                                                        >  2:518248/1‑140 (MQ=255)

                                                                                    gTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCtt                                                             >  2:1405110/1‑128 (MQ=255)

                                                                                    gTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCtt                                                             <  1:1405110/128‑1 (MQ=255)

                                                                                     tGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAAt                                                >  1:143127/1‑140 (MQ=255)

                                                                                       cTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAAttt                                              <  2:1352681/140‑1 (MQ=255)

                                                                                              gTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTtccagctc                                       <  2:1132427/140‑1 (MQ=255)

                                                                                               tCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTtccagctcc                                      >  2:1261114/1‑140 (MQ=255)

                                                                                                  ccATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTtccagctccagc                                   <  1:1375953/140‑1 (MQ=255)

                                                                                                      ccGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCAt                               <  1:1143718/140‑1 (MQ=255)

                                                                                                      ccGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCAt                               <  1:1419177/140‑1 (MQ=255)

                                                                                                       cGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTtcc                                            <  1:477052/126‑1 (MQ=255)

                                                                                                       cGTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTtcc                                            >  2:477052/1‑126 (MQ=255)

                                                                                                        gTTCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTg                             <  2:1444346/140‑1 (MQ=255)

                                                                                                         ttCAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGc                            >  1:1271786/1‑140 (MQ=255)

                                                                                                           cAACCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCt                          >  2:1051509/1‑140 (MQ=255)

                                                                                                             aCCGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTc                        <  1:1261114/140‑1 (MQ=255)

                                                                                                              ccGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCa                       <  2:1574930/140‑1 (MQ=255)

                                                                                                               cGGATATTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCAt                      <  2:246427/140‑1 (MQ=255)

                                                                                                                  atatTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGc                   <  1:807946/140‑1 (MQ=255)

                                                                                                                  atatTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGc                   <  1:81235/140‑1 (MQ=255)

                                                                                                                    atTTACTTACCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGCGa                 <  1:1051509/140‑1 (MQ=255)

                                                                                                                           tacCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGCGAATAAACa          >  2:1094302/1‑140 (MQ=255)

                                                                                                                            acCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGCGAATAAACAg         >  1:1442349/1‑140 (MQ=255)

                                                                                                                            acCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGCGAATAAACAg         >  1:1630093/1‑140 (MQ=255)

                                                                                                                            acCGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGCGAATAAACAg         <  2:1673046/140‑1 (MQ=255)

                                                                                                                             ccGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGCGAATAAACAGc        <  2:636593/140‑1 (MQ=255)

                                                                                                                             ccGCCAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGCGAATAAACAGc        >  2:259345/1‑140 (MQ=255)

                                                                                                                                ccAGACGGCACAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGCGAATAAACAGCAAt     <  1:259345/140‑1 (MQ=255)

ACTGTCCATTGGCATCAGTAATGGATCAAGTAACTCCGCGGCTGGAATATCCTGCTGTTCAGCTTGCTCAACAAGTTCACGCAGGTGCTCCAGGGTCACCATCCGTTCAACCGGATATTTACTTACCGCCAGACGGCGCAGGTAAATAACATGCGCGCCACAGCCGAGTTTTTCACCCAGGTCATCAATGATGGTGCGGATATAAGTGCCTTTTGAGCAGTGAATTTCCAGCTCCAGCTCATTGCCTTCATGGCGAATAAACAGCAATTCA  >  NC_000913/3312040‑3312310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`