BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,497,200	T→C	G66G (GGT→GGC)	nirC →	nitrite transporter NirC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,497,200	0	T	C	100.0%	379.2 / NA	103	G66G (GGT→GGC)	nirC	nitrite transporter NirC
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (46/57); total (46/57)

Only 100 of 103 total aligned reads displayed.

GCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGTATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACCTGGCTGGGT  >  NC_000913/3497063‑3497335

gCAAATATCCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCAt                                                                                                                                       <  1:1623167/140‑1 (MQ=255)

    aTAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGcc                                                                                                                                   >  2:389760/1‑140 (MQ=255)

      aaCCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCtt                                                                                                                                 <  1:975798/140‑1 (MQ=255)

         ccGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGC‑CGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACg                                                                                                                             <  2:524679/140‑1 (MQ=255)

          cGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACg                                                                                                                             <  1:206501/140‑1 (MQ=255)

          cGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACg                                                                                                                             <  2:1183411/140‑1 (MQ=255)

          cGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACg                                                                                                                             <  2:480418/140‑1 (MQ=255)

            cTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTAGGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCt                                                                                                                           >  2:659706/1‑140 (MQ=255)

            cTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCt                                                                                                                           >  1:1559727/1‑140 (MQ=255)

             tCGGCTTTTGGGTCGGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTg                                                                                                                          >  2:645901/1‑140 (MQ=255)

               ggCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGt                                                                                                                        >  1:1072910/1‑140 (MQ=255)

                        gTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGc                                                                                                               <  1:349130/140‑1 (MQ=255)

                        gTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGc                                                                                                               <  1:1566813/140‑1 (MQ=255)

                        gTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGc                                                                                                               <  1:389760/140‑1 (MQ=255)

                        gTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGc                                                                                                               <  2:1568735/140‑1 (MQ=255)

                        gTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGc                                                                                                               <  1:1107772/140‑1 (MQ=255)

                           aGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGTCATCGCCTTAACg                                                                                                                             <  1:1420360/123‑1 (MQ=255)

                           aGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGTCATCGCCTTAACg                                                                                                                             >  2:1420360/1‑123 (MQ=255)

                           aGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCgg                                                                                                            >  2:1450044/1‑140 (MQ=255)

                            gCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGt                                                                                                           <  1:949702/140‑1 (MQ=255)

                             cTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGtt                                                                                                          <  2:1559727/140‑1 (MQ=255)

                             cTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGtt                                                                                                          <  2:1072910/140‑1 (MQ=255)

                                 gCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGa                                                                                                      >  2:721210/1‑140 (MQ=255)

                                  ccATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGaa                                                                                                     <  2:77416/140‑1 (MQ=255)

                                  ccATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGaa                                                                                                     <  2:791148/140‑1 (MQ=255)

                                  ccATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGaa                                                                                                     <  2:1086965/140‑1 (MQ=255)

                                    aTGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACt                                                                                                   <  1:1307894/140‑1 (MQ=255)

                                    aTGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACt                                                                                                   <  1:368797/140‑1 (MQ=255)

                                    aTGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACt                                                                                                   <  1:1631981/140‑1 (MQ=255)

                                     tGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGTTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGc                                                                                                               >  1:548793/1‑127 (MQ=255)

                                     tGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGTTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGc                                                                                                               <  2:548793/127‑1 (MQ=255)

                                     tGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGc                                                                                                               >  2:770731/1‑127 (MQ=255)

                                     tGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGc                                                                                                               <  1:770731/127‑1 (MQ=255)

                                       gcgggcgCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGtt                                                                                                >  1:1450313/1‑140 (MQ=255)

                                        cgggcgCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTc                                                                                               >  1:1459983/1‑140 (MQ=255)

                                         gggcgCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCa                                                                                              <  1:696596/140‑1 (MQ=255)

                                         gggcgCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCa                                                                                              <  2:946811/140‑1 (MQ=255)

                                         gggcgCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCa                                                                                              <  1:1185447/140‑1 (MQ=255)

                                                tATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTAGGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGaca                                                                                       <  1:659706/140‑1 (MQ=255)

                                                 aTGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTc                                                                                               <  2:1178991/131‑1 (MQ=255)

                                                 aTGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTc                                                                                               >  1:1178991/1‑131 (MQ=255)

                                                 aTGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTc                                                                                               <  1:1453130/131‑1 (MQ=255)

                                                 aTGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTc                                                                                               >  2:1453130/1‑131 (MQ=255)

                                                    tgGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACAcc                                                                                   <  1:1661384/140‑1 (MQ=255)

                                                       gTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATg                                                                                >  1:1135958/1‑140 (MQ=255)

                                                          ttGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTc                                                                             >  2:112711/1‑140 (MQ=255)

                                                            gggATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCt                                                                           >  2:76532/1‑140 (MQ=255)

                                                                  atcCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGacaca                                                                                     <  2:871097/124‑1 (MQ=255)

                                                                  atcCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGacaca                                                                                     >  1:871097/1‑124 (MQ=255)

                                                                  atcCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGaca                                                                                       >  2:179710/1‑122 (MQ=255)

                                                                  atcCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGaca                                                                                       <  1:179710/122‑1 (MQ=255)

                                                                  atcCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCtt                                                                     >  2:1615852/1‑140 (MQ=255)

                                                                        aTTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGt                                                               >  2:119291/1‑140 (MQ=255)

                                                                             cACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTgggg                                                                <  2:1311909/134‑1 (MQ=255)

                                                                             cACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTgggg                                                                >  1:1311909/1‑134 (MQ=255)

                                                                             cACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAg                                                          >  1:778246/1‑140 (MQ=255)

                                                                                 cTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACGATGTTCCTCACCTTTGGGGTAAAAGCggg                                                      <  2:1450313/140‑1 (MQ=255)

                                                                                 cTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCggg                                                      <  1:1450044/140‑1 (MQ=255)

                                                                                 cTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCggg                                                      <  1:112711/140‑1 (MQ=255)

                                                                                  tCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGgc                                                     >  1:424727/1‑140 (MQ=255)

                                                                                    ggTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCggg                                                      <  2:585182/137‑1 (MQ=255)

                                                                                    ggTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCggg                                                      >  1:585182/1‑137 (MQ=255)

                                                                                           tGCTCGATCCATCCGTACGGCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGc                                            >  1:444126/1‑140 (MQ=255)

                                                                                            gCTCGATCCATCCGTACGGCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGcc                                           <  2:444126/140‑1 (MQ=255)

                                                                                            gCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGcc                                           <  1:284051/140‑1 (MQ=255)

                                                                                            gCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGcc                                           <  1:119291/140‑1 (MQ=255)

                                                                                                 atccatccGTACGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACggg                                      <  1:82402/140‑1 (MQ=255)

                                                                                                            cGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGTGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGc                           >  1:1116810/1‑140 (MQ=255)

                                                                                                            cGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGTATCAGCCACGGGCAAATGTGGGc                           >  2:472335/1‑140 (MQ=255)

                                                                                                            cGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAAt                                 <  2:674563/134‑1 (MQ=255)

                                                                                                            cGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAAt                                 >  1:674563/1‑134 (MQ=255)

                                                                                                            cGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTggg                            <  1:866265/139‑1 (MQ=255)

                                                                                                            cGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTggg                            >  2:866265/1‑139 (MQ=255)

                                                                                                            cGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGc                           >  1:1542725/1‑140 (MQ=255)

                                                                                                            cGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGc                           >  2:1400351/1‑140 (MQ=255)

                                                                                                            cGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGc                           >  1:522296/1‑140 (MQ=255)

                                                                                                            cGCCCTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGc                           >  2:480271/1‑140 (MQ=255)

                                                                                                                cTTTGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACTCACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATc                       <  2:1160511/140‑1 (MQ=255)

                                                                                                                 tttGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATcc                      <  1:149535/140‑1 (MQ=255)

                                                                                                                 tttGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATcc                      >  1:113952/1‑140 (MQ=255)

                                                                                                                 tttGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATcc                      >  1:600148/1‑140 (MQ=255)

                                                                                                                 tttGGTGATGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATcc                      >  2:883466/1‑140 (MQ=255)

                                                                                                                         tGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCaa              >  1:1055804/1‑140 (MQ=255)

                                                                                                                         tGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCaa              >  1:1295551/1‑140 (MQ=255)

                                                                                                                         tGGGCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCaa              <  2:113952/140‑1 (MQ=255)

                                                                                                                           ggCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCt                     <  2:625672/131‑1 (MQ=255)

                                                                                                                           ggCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCt                     >  1:625672/1‑131 (MQ=255)

                                                                                                                           ggCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGc                <  2:723618/136‑1 (MQ=255)

                                                                                                                           ggCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGc                >  1:723618/1‑136 (MQ=255)

                                                                                                                           ggCGCGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAAc            >  1:892351/1‑140 (MQ=255)

                                                                                                                            gcgcGACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAAcc           <  1:645901/140‑1 (MQ=255)

                                                                                                                             cgcgACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACct          >  2:1653280/1‑140 (MQ=255)

                                                                                                                               cgACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCaa                         <  1:129849/123‑1 (MQ=255)

                                                                                                                               cgACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCaa                         >  2:129849/1‑123 (MQ=255)

                                                                                                                               cgACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACctgg        <  1:515127/140‑1 (MQ=255)

                                                                                                                               cgACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACctgg        <  1:721210/140‑1 (MQ=255)

                                                                                                                               cgACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACctgg        <  2:1055804/140‑1 (MQ=255)

                                                                                                                               cgACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACctgg        <  1:568216/140‑1 (MQ=255)

                                                                                                                               cgACCTTTGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACctgg        <  1:544261/140‑1 (MQ=255)

                                                                                                                                     ttGGCATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTACTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACCTGGCTGGGt  <  2:913517/140‑1 (MQ=255)

GCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGTATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACCTGGCTGGGT  >  NC_000913/3497063‑3497335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`