Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	476,217	T→C	Y52C (TAC→TGC)	atl ←	DNA base‑flipping protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	476,217	0	T	C	100.0%	283.0 / NA	77	Y52C (TAC→TGC)	atl	DNA base‑flipping protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/36);  total (41/36)

GTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAGTGAAGTCGCA  >  NC_000913/476080‑476352                                                                                                                                          |                                                                                                                                        gtccggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCaa                                                                                                                                       >  1:262963/1‑140 (MQ=255)    cggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCCCCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAgtg                                                                                                                                    <  1:480353/140‑1 (MQ=255)    cggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAgtg                                                                                                                                    <  1:327289/140‑1 (MQ=255)    cggtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAgtg                                                                                                                                    <  2:831504/140‑1 (MQ=255)      gtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAgtggt                                                                                                                                  >  2:1108819/1‑140 (MQ=255)      gtTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAgtggt                                                                                                                                  >  2:921335/1‑140 (MQ=255)          gCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCCCCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACa                                                                                                                              <  1:518883/140‑1 (MQ=255)          gCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACa                                                                                                                              <  2:1353816/140‑1 (MQ=255)           cGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACAt                                                                                                                             <  1:1108819/140‑1 (MQ=255)                  gtgCCGTGGCGATTAACCCCCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTc                                                                                                                      <  2:194063/140‑1 (MQ=255)                   tgCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACAt                                                                                                                             >  1:1175771/1‑132 (MQ=255)                   tgCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACAt                                                                                                                             <  2:1175771/132‑1 (MQ=255)                   tgCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCg                                                                                                                     >  1:852303/1‑140 (MQ=255)                   tgCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCg                                                                                                                     >  1:141055/1‑140 (MQ=255)                    gCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACACCACCGCAAGTGGTGACATAGCCTTCgg                                                                                                                    >  2:1261518/1‑140 (MQ=255)                          gCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAg                                                                                                                           <  1:206812/127‑1 (MQ=255)                          gCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAg                                                                                                                           >  2:206812/1‑127 (MQ=255)                          gCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAg                                                                                                              >  1:1344486/1‑140 (MQ=255)                                   caccCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACACCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGcgacga                                                                                                     <  1:1261518/140‑1 (MQ=255)                                   caccCGGTGCCAGGGTAAGGTGCCGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGcgacga                                                                                                     <  1:1227648/140‑1 (MQ=255)                                     cccGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGAtt                                                                                                   >  2:510581/1‑140 (MQ=255)                                          tGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCa                                                                                              >  2:1451022/1‑140 (MQ=255)                                            ccAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGa                                                                                            <  2:262963/140‑1 (MQ=255)                                            ccAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGa                                                                                            >  2:122632/1‑140 (MQ=255)                                            ccAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGa                                                                                            <  1:122632/140‑1 (MQ=255)                                            ccAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGa                                                                                            >  1:1006070/1‑140 (MQ=255)                                                 gTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGt                                                                                       <  2:1007329/140‑1 (MQ=255)                                                  tAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGtt                                                                                      <  2:141055/140‑1 (MQ=255)                                                  tAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGtt                                                                                      <  2:852303/140‑1 (MQ=255)                                                      gTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTgggg                                                                                  >  1:1422987/1‑140 (MQ=255)                                                          tgcCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGa                                                                                 >  1:995178/1‑137 (MQ=255)                                                          tgcCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGa                                                                                 <  2:995178/137‑1 (MQ=255)                                                          tgcCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAAt                                                                              >  2:1282247/1‑140 (MQ=255)                                                          tgcCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAAt                                                                              >  1:855876/1‑140 (MQ=255)                                                          tgcCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAAt                                                                              >  1:657666/1‑140 (MQ=255)                                                           gcCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATg                                                                             >  1:787999/1‑140 (MQ=255)                                                              ttCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAAt                                                                          <  1:920565/140‑1 (MQ=255)                                                                cAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAAtct                                                                        >  2:676395/1‑140 (MQ=255)                                                                 aGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAAtctt                                                                       >  2:85204/1‑140 (MQ=255)                                                                          cTTTAACCCCCCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCa                                                              <  2:74965/140‑1 (MQ=255)                                                                            ttAACACACCCCCCCCCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATc                                                            <  2:314007/140‑1 (MQ=255)                                                                              aaCACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCtt                                                          <  1:1451022/140‑1 (MQ=255)                                                                                   cccGCCCCCCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTttctt                                                     <  1:1441989/139‑1 (MQ=255)                                                                                   acCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTttctt                                                     >  1:1290714/1‑140 (MQ=255)                                                                                    ccGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTttcttc                                                    >  1:16421/1‑140 (MQ=255)                                                                                    ccGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTttcttc                                                    >  1:1187211/1‑140 (MQ=255)                                                                                     cGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTcc                                                   >  2:1459754/1‑140 (MQ=255)                                                                                     cGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTcc                                                   >  1:723690/1‑140 (MQ=255)                                                                                     cGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTcc                                                   >  2:420896/1‑140 (MQ=255)                                                                                     cGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTcc                                                   >  2:767407/1‑140 (MQ=255)                                                                                     cGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTcc                                                   >  2:77648/1‑140 (MQ=255)                                                                                     cGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATATTCTTTTTCCATCTTTTCTTcc                                                   >  2:1242548/1‑140 (MQ=255)                                                                                       cccACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTg                                                 >  1:551425/1‑140 (MQ=255)                                                                                             tGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTaa                                           <  1:1282247/140‑1 (MQ=255)                                                                                             tGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTaa                                           <  1:705360/140‑1 (MQ=255)                                                                                                  cgcggcgcggGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCAGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTttcttc                                                    >  1:30549/1‑126 (MQ=255)                                                                                                  cgcggcgcggGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCAGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTttcttc                                                    <  2:30549/126‑1 (MQ=255)                                                                                                    cggcgcggGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCt                                                  <  1:1606855/126‑1 (MQ=255)                                                                                                    cggcgcggGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCt                                                  >  2:1606855/1‑126 (MQ=255)                                                                                                    cggcgcggGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCa                                    >  1:455552/1‑140 (MQ=255)                                                                                                      gcgcggGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGc                                  >  2:445949/1‑140 (MQ=255)                                                                                                       cgcggGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCa                                 <  2:212811/140‑1 (MQ=255)                                                                                                         cggGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTaa                                           <  1:1436740/128‑1 (MQ=255)                                                                                                         cggGGCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTaa                                           >  2:1436740/1‑128 (MQ=255)                                                                                                             gCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCt                           <  2:1290714/140‑1 (MQ=255)                                                                                                             gCGATCCCGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCt                           <  2:657666/140‑1 (MQ=255)                                                                                                                 tCCTGCCAGTTTCGCCACATTACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGaa                       >  2:529442/1‑140 (MQ=255)                                                                                                                    cGCCAGTTTCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGaaaaa                    <  1:77648/140‑1 (MQ=255)                                                                                                                         gTTTCGCCACATCGCCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGccc               <  1:1242548/140‑1 (MQ=255)                                                                                                                          tttCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGc                 >  2:1262134/1‑137 (MQ=255)                                                                                                                          tttCGCCACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGc                 <  1:1262134/137‑1 (MQ=255)                                                                                                                              gCCACATTACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAGTg          <  1:529442/140‑1 (MQ=255)                                                                                                                               ccACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAGTGa         >  2:70767/1‑140 (MQ=255)                                                                                                                               ccACATCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAGTGa         >  2:1030068/1‑140 (MQ=255)                                                                                                                                 acaTCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAGTGAAg       <  1:1679579/140‑1 (MQ=255)                                                                                                                                   aTCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAg            >  1:989343/1‑133 (MQ=255)                                                                                                                                   aTCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAg            <  2:989343/133‑1 (MQ=255)                                                                                                                                   aTCACCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAGTGAAGTc     >  2:533214/1‑140 (MQ=255)                                                                                                                                      aCCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAGTGAAGTCGCa  <  2:1344486/140‑1 (MQ=255)                                                                                                                                      aCCGCAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAGTGAAGTCGCa  <  1:1030068/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                        GTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACCCGGTGCCAGGGTAAGGTGCTGCCTTCAGGGAGACGCTTTAACACACCGCCCACCTGGCGCGCGGCGCGGGGCGATCCCGCCAGTTTCGCCACATCACCGTAAGTGGTGACATAGCCTTCGGGAATAGCGGCGACGATTTGCCAGACGCGTTGGGGAAATGAATCTTCTTTTTCCATCTTTTCTTCCTGAGGTAATTTTTCAGCATAATCTGGAAAAACGCCCGAGTGAAGTCGCA  >  NC_000913/476080‑476352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑