BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,536,836	G→A	E9K (GAA→AAA)	greB →	transcription elongation factor GreB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,536,836	0	G	A	100.0%	556.2 / NA	154	E9K (GAA→AAA)	greB	transcription elongation factor GreB
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (83/71); total (83/71)

Only 100 of 154 total aligned reads displayed.

AGCAGCTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGGAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTATCAGTATAATAAAAAGC  >  NC_000913/3536705‑3536971

agcagcTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTAt                                                                                                                                 >  2:1144552/1‑140 (MQ=255)

agcagcTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTAt                                                                                                                                 >  2:1149919/1‑140 (MQ=255)

 gcagcTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATg                                                                                                                                >  2:748329/1‑140 (MQ=255)

  cagcTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGATTCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGa                                                                                                                               >  1:263294/1‑140 (MQ=255)

  cagcTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGa                                                                                                                               >  1:1233493/1‑140 (MQ=255)

  cagcTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGa                                                                                                                               >  1:1097739/1‑140 (MQ=255)

  cagcTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGa                                                                                                                               >  1:479580/1‑140 (MQ=255)

  cagcTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGa                                                                                                                               >  1:1213073/1‑140 (MQ=255)

   agcTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGaa                                                                                                                              <  1:14836/140‑1 (MQ=255)

   agcTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGaa                                                                                                                              <  1:1247416/140‑1 (MQ=255)

     cTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGaaaa                                                                                                                            >  2:1396664/1‑140 (MQ=255)

     cTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGaaaa                                                                                                                            >  1:151522/1‑140 (MQ=255)

     cTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAACCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGaaaa                                                                                                                            <  2:1585803/140‑1 (MQ=255)

              aCAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACa                                                                                                                   <  2:1233493/140‑1 (MQ=255)

               cAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACaa                                                                                                                  >  2:1698075/1‑140 (MQ=255)

               cAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACaa                                                                                                                  >  1:1324181/1‑140 (MQ=255)

                 aTTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAaga                                                                                                                <  1:123363/140‑1 (MQ=255)

                 aTTTATTCGGCGAAACATTATTGATTCTGTTGAGATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAaga                                                                                                                <  2:1352444/140‑1 (MQ=255)

                  tttATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAagag                                                                                                               <  1:1678032/140‑1 (MQ=255)

                  tttATTCGGCGAAACATTATTGATTCTGTTAATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAagag                                                                                                               <  2:1037912/140‑1 (MQ=255)

                     aTTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCtt                                                                                                            >  1:308905/1‑140 (MQ=255)

                     aTTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCtt                                                                                                            >  1:747325/1‑140 (MQ=255)

                       tCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTaa                                                                                                          >  2:595711/1‑140 (MQ=255)

                        cGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAAt                                                                                                         <  2:573707/140‑1 (MQ=255)

                        cGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAAt                                                                                                         <  2:1324181/140‑1 (MQ=255)

                        cGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAAt                                                                                                         <  1:1149919/140‑1 (MQ=255)

                         ggCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAAtt                                                                                                        >  2:125866/1‑140 (MQ=255)

                             aaaCATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTAtct                                                                                                    <  2:479580/140‑1 (MQ=255)

                             aaaCATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTAtct                                                                                                    <  2:1191862/140‑1 (MQ=255)

                             aaaCATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTAtct                                                                                                    <  2:354678/140‑1 (MQ=255)

                               aCATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATctct                                                                                                  <  1:1423294/140‑1 (MQ=255)

                                      tGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTga                                                                                           <  1:375977/140‑1 (MQ=255)

                                        aTTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTgaag                                                                                         <  1:1263187/140‑1 (MQ=255)

                                            tGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACg                                                                                     >  1:1269580/1‑140 (MQ=255)

                                             gTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGc                                                                                    >  2:417603/1‑140 (MQ=255)

                                             gTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGc                                                                                    >  1:498850/1‑140 (MQ=255)

                                                      aTCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTc                                                                           >  2:1669364/1‑140 (MQ=255)

                                                        cACGTTATACCCAATGTGCGCATTATCAAACAGACAATGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTcac                                                                         >  1:656226/1‑140 (MQ=255)

                                                        cACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTcac                                                                         >  1:809194/1‑140 (MQ=255)

                                                        cACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTcac                                                                         >  2:688579/1‑140 (MQ=255)

                                                             tataCCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACaaaaa                                                                    >  2:244592/1‑140 (MQ=255)

                                                              ataCCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACaaaaaa                                                                   >  2:1384899/1‑140 (MQ=255)

                                                              ataCCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACaaaaaa                                                                   >  1:1591048/1‑140 (MQ=255)

                                                               taCCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAg                                                                  <  1:1144552/140‑1 (MQ=255)

                                                               taCCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAg                                                                  <  1:1264165/140‑1 (MQ=255)

                                                                aCCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAgg                                                                 >  2:887091/1‑140 (MQ=255)

                                                                aCCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAgg                                                                 >  1:742006/1‑140 (MQ=255)

                                                                aCCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAgg                                                                 >  2:1555327/1‑140 (MQ=255)

                                                                aCCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAgg                                                                 >  2:1527357/1‑140 (MQ=255)

                                                                 cccAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGt                                                                >  2:303392/1‑140 (MQ=255)

                                                                     aTGTGCGCATTATCAAACAGAGAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGAcc                                                            >  2:1203908/1‑140 (MQ=255)

                                                                     aTGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGAcc                                                            >  1:1380498/1‑140 (MQ=255)

                                                                     aTGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGAc                                                             <  2:529888/139‑1 (MQ=255)

                                                                       gtgCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTg                                                          <  1:7583/140‑1 (MQ=255)

                                                                         gcgcATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTggg                                                        >  1:940479/1‑140 (MQ=255)

                                                                         gcgcATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTggg                                                        >  2:1250905/1‑140 (MQ=255)

                                                                          cgcATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGc                                                       >  1:1087360/1‑140 (MQ=255)

                                                                          cgcATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGc                                                       >  1:1369985/1‑140 (MQ=255)

                                                                             aTTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGc                                                    <  1:595711/140‑1 (MQ=255)

                                                                             aTTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGc                                                    <  2:1352937/140‑1 (MQ=255)

                                                                             aTTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGc                                                    <  1:1588162/140‑1 (MQ=255)

                                                                             aTTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGc                                                    <  2:1210376/140‑1 (MQ=255)

                                                                               tATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGcc                                                      >  1:1009273/1‑136 (MQ=255)

                                                                                aTCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAg                                                                  <  2:317299/123‑1 (MQ=255)

                                                                                aTCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAg                                                                  >  1:317299/1‑123 (MQ=255)

                                                                                         aCAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGa                                        >  1:1566768/1‑140 (MQ=255)

                                                                                         aCAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGa                                        >  1:202872/1‑140 (MQ=255)

                                                                                         aCAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGa                                        >  2:1015411/1‑140 (MQ=255)

                                                                                         aCAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCATGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGa                                        >  1:858939/1‑140 (MQ=255)

                                                                                          cAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGAc                                       <  1:1015411/140‑1 (MQ=255)

                                                                                          cAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGAc                                       <  1:889834/140‑1 (MQ=255)

                                                                                           aaaGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGAcc                                      >  2:919011/1‑140 (MQ=255)

                                                                                           aaaGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGAcc                                      >  2:278441/1‑140 (MQ=255)

                                                                                                   tCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGaa                              >  2:1241679/1‑140 (MQ=255)

                                                                                                   tCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGaa                              >  2:796353/1‑140 (MQ=255)

                                                                                                   tCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGaa                              >  1:971058/1‑140 (MQ=255)

                                                                                                   tCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGaa                              >  2:1089130/1‑140 (MQ=255)

                                                                                                   tCAACGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGT‑‑CAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGaaaa                            >  1:1168941/1‑140 (MQ=255)

                                                                                                       cGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGa                               <  2:757236/135‑1 (MQ=255)

                                                                                                       cGAGATGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGa                               >  1:757236/1‑135 (MQ=255)

                                                                                                         agaTGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCt                        <  1:1203908/140‑1 (MQ=255)

                                                                                                         agaTGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCt                        >  1:1419134/1‑140 (MQ=255)

                                                                                                         agaTGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCt                        <  2:1527082/140‑1 (MQ=255)

                                                                                                         agaTGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCt                        <  2:244429/140‑1 (MQ=255)

                                                                                                         agaTGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCt                        <  2:18449/140‑1 (MQ=255)

                                                                                                         agaTGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCt                        <  2:1087360/140‑1 (MQ=255)

                                                                                                          gaTGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTg                       <  2:1591048/140‑1 (MQ=255)

                                                                                                          gaTGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTg                       <  1:149195/140‑1 (MQ=255)

                                                                                                            tGAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGAc                     >  2:1213607/1‑140 (MQ=255)

                                                                                                             gAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACt                    >  1:190317/1‑140 (MQ=255)

                                                                                                             gAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACt                    <  1:1698075/140‑1 (MQ=255)

                                                                                                             gAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACt                    <  1:1555327/140‑1 (MQ=255)

                                                                                                             gAAAACGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACt                    <  1:1213607/140‑1 (MQ=255)

                                                                                                               aaaCGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTAt                  <  2:1566768/140‑1 (MQ=255)

                                                                                                               aaaCGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTAt                  <  2:1269580/140‑1 (MQ=255)

                                                                                                               aaaCGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTAt                  <  2:742006/140‑1 (MQ=255)

                                                                                                               aaaCGCCCCTGGTTACCCGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTAt                  <  1:278441/140‑1 (MQ=255)

                                                                                                                  cGCCCCTGGTTACCCGGAAAGGGAATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTATCAg               >  1:1509817/1‑140 (MQ=255)

                                                                                                                               ccGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGTCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTATCAGTATAATAAAAAGc  >  2:1166559/1‑140 (MQ=255)

                                                                                                                               ccGGAAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTATCAGTATAATAAAAAGc  >  1:1640126/1‑140 (MQ=255)

AGCAGCTTAAGTATACAATTTATTCGGCGAAACATTATTGATTCTGTTGATATGATCACGTTATACCCAATGTGCGCATTATCAAACAGACAAAGGGAATCAACGAGATGAAAACGCCCCTGGTTACCCGGGAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTATCAGTATAATAAAAAGC  >  NC_000913/3536705‑3536971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`