BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,961,221	A→G	D182G (GAC→GGC)	rep →	ATP‑dependent DNA helicase Rep

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,961,221	0	A	G	100.0%	459.2 / NA	124	D182G (GAC→GGC)	rep	ATP‑dependent DNA helicase Rep
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (65/59); total (65/59)

Only 100 of 124 total aligned reads displayed.

GACCATCTCTAACTGGAAGAATGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAGCTGGT  >  NC_000913/3961087‑3961356

gACCATCTCTAACTGGAAGAATGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCg                                                                                                                                    <  2:758389/140‑1 (MQ=255)

    aTCTCTAACTGGAAGAATGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCgatga                                                                                                                                <  2:1578200/140‑1 (MQ=255)

    aTCTCTAACTGGAAGAATGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCgatga                                                                                                                                <  1:1487938/140‑1 (MQ=255)

               gaagaaTGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTAt                                                                                                                     >  2:754916/1‑140 (MQ=255)

               gaagaaTGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTAt                                                                                                                     <  2:540852/140‑1 (MQ=255)

                aagaaTGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTAtt                                                                                                                    >  2:1545876/1‑140 (MQ=255)

                aagaaTGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTAtt                                                                                                                    >  1:1203442/1‑140 (MQ=255)

                aagaaTGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTAtt                                                                                                                    >  2:1389831/1‑140 (MQ=255)

                aagaaTGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTAtt                                                                                                                    >  1:1586165/1‑140 (MQ=255)

                aagaaTGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTAtt                                                                                                                    >  1:1560654/1‑140 (MQ=255)

                 agaaTGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTg                                                                                                                   <  2:238618/140‑1 (MQ=255)

                     tGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGcc                                                                                                                 >  2:325041/1‑138 (MQ=255)

                     tGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGcc                                                                                                                 <  1:325041/138‑1 (MQ=255)

                       aTCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACg                                                                                                             >  1:1317207/1‑140 (MQ=255)

                       aTCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACg                                                                                                             >  1:125041/1‑140 (MQ=255)

                        tctcAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGt                                                                                                            <  1:896772/140‑1 (MQ=255)

                         ctcAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGtt                                                                                                           >  1:516764/1‑140 (MQ=255)

                          tcAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATAGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTtg                                                                                                          >  2:1512621/1‑140 (MQ=255)

                           cAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTtgc                                                                                                         <  2:1255603/140‑1 (MQ=255)

                             aaaCACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTtgctg                                                                                                       >  2:1223932/1‑140 (MQ=255)

                                  ccGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCa                                                                                                  <  1:687937/140‑1 (MQ=255)

                                   cGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTtgctgctg                                                                                                    <  1:784329/137‑1 (MQ=255)

                                   cGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTtgc                                                                                                         >  2:1219807/1‑132 (MQ=255)

                                   cGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTtgc                                                                                                         <  1:1219807/132‑1 (MQ=255)

                                   cGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCaa                                                                                                 >  2:1107736/1‑140 (MQ=255)

                                   cGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCaa                                                                                                 <  2:516764/140‑1 (MQ=255)

                                   cGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCaa                                                                                                 >  2:1560249/1‑140 (MQ=255)

                                    gTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGt                                                                                                            <  1:1632613/128‑1 (MQ=255)

                                    gTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGt                                                                                                            >  2:1632613/1‑128 (MQ=255)

                                    gTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAAc                                                                                                >  2:1089899/1‑140 (MQ=255)

                                       ccAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCa                                                                                             <  2:1317207/140‑1 (MQ=255)

                                          ggcggcAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATg                                                                                          >  2:1206157/1‑140 (MQ=255)

                                               cagcaAGTGCGATTGGCGAGCGGGACCGTATTTTTGTCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATgaagaa                                                                                     >  2:1591672/1‑140 (MQ=255)

                                               cagcaAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATgaagaa                                                                                     <  2:1178908/140‑1 (MQ=255)

                                               cagcaAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATgaagaa                                                                                     >  1:1131441/1‑140 (MQ=255)

                                               cagcaAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATgaagaa                                                                                     >  1:1601469/1‑140 (MQ=255)

                                                agcaAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGaagaag                                                                                    >  1:1237860/1‑140 (MQ=255)

                                                    aGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCg                                                                                <  1:1389831/140‑1 (MQ=255)

                                                     gTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGc                                                                               >  2:285611/1‑140 (MQ=255)

                                                         gATTGGCGAGCGGGACCGTATTTTTTCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAgc                                                                           <  2:460905/140‑1 (MQ=255)

                                                              gCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTg                                                                       >  1:454044/1‑139 (MQ=255)

                                                              gCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTg                                                                       <  2:454044/139‑1 (MQ=255)

                                                                         cGTATTTTTGTCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAAt                                                           <  1:1591672/140‑1 (MQ=255)

                                                                         cGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAAt                                                           <  1:2753/140‑1 (MQ=255)

                                                                                ttGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTAt                                                    <  1:512718/140‑1 (MQ=255)

                                                                                ttGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTAt                                                    >  1:859029/1‑140 (MQ=255)

                                                                                  gCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTAt                                                    <  2:292254/138‑1 (MQ=255)

                                                                                  gCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTAt                                                    >  1:292254/1‑138 (MQ=255)

                                                                                  gCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATct                                                  >  2:569360/1‑140 (MQ=255)

                                                                                    ccATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATctgc                                                <  1:285611/140‑1 (MQ=255)

                                                                                     cATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATctgct                                               >  2:1308148/1‑140 (MQ=255)

                                                                                       ttGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCtgg                                             <  1:1107736/140‑1 (MQ=255)

                                                                                       ttGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCtgg                                             <  2:859029/140‑1 (MQ=255)

                                                                                          ttATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCtggtgg                                          <  1:474376/140‑1 (MQ=255)

                                                                                           tATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGa                                         <  2:532355/140‑1 (MQ=255)

                                                                                           tATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGa                                         <  2:1693492/140‑1 (MQ=255)

                                                                                            aTGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGAt                                        <  1:1512621/140‑1 (MQ=255)

                                                                                             tGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATg                                       <  2:850132/140‑1 (MQ=255)

                                                                                                  tGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATg                                       <  1:1683119/135‑1 (MQ=255)

                                                                                                  tGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTAt                                  >  2:1334689/1‑140 (MQ=255)

                                                                                                  tGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTAt                                  >  1:338670/1‑140 (MQ=255)

                                                                                                  tGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTAt                                  >  1:934068/1‑140 (MQ=255)

                                                                                                  tGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTAt                                  >  2:399425/1‑140 (MQ=255)

                                                                                                  tGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTAt                                  >  1:250600/1‑140 (MQ=255)

                                                                                                  tGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGACCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTAt                                  >  1:685283/1‑140 (MQ=255)

                                                                                                   gTATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATc                                 <  2:125041/140‑1 (MQ=255)

                                                                                                    tATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCa                                >  1:313985/1‑140 (MQ=255)

                                                                                                    tATGATGCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCa                                >  2:179258/1‑140 (MQ=255)

                                                                                                     atgatgCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAg                               <  1:179258/140‑1 (MQ=255)

                                                                                                     atgatgCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAg                               <  1:1089899/140‑1 (MQ=255)

                                                                                                     atgatgCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAg                               >  1:1626555/1‑140 (MQ=255)

                                                                                                     atgatgCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAg                               <  1:569360/140‑1 (MQ=255)

                                                                                                          gCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacac                          <  2:1626555/140‑1 (MQ=255)

                                                                                                          gCACACCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacac                          <  2:1586165/140‑1 (MQ=255)

                                                                                                           cacaCCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacacc                         >  1:1135611/1‑140 (MQ=255)

                                                                                                           cacaCCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacacc                         >  1:783221/1‑140 (MQ=255)

                                                                                                           cacaCCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTACTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacacc                         >  2:1674465/1‑140 (MQ=255)

                                                                                                            acacCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacacca                        >  2:206809/1‑140 (MQ=255)

                                                                                                            acacCCGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacacca                        >  2:548549/1‑140 (MQ=255)

                                                                                                              acCTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATCTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacaccaac                      >  2:833450/1‑140 (MQ=255)

                                                                                                               ccTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacaccaaca                     <  1:1584943/140‑1 (MQ=255)

                                                                                                                cTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacaccaacac                    >  2:1136704/1‑140 (MQ=255)

                                                                                                                cTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacaccaacac                    <  2:293846/140‑1 (MQ=255)

                                                                                                                cTGAAAGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacaccaacac                    >  2:443832/1‑140 (MQ=255)

                                                                                                                   aaaGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACAccag                 <  1:723775/140‑1 (MQ=255)

                                                                                                                    aaGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATc                                 <  2:1190250/123‑1 (MQ=255)

                                                                                                                    aaGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATc                                 >  1:1190250/1‑123 (MQ=255)

                                                                                                                    aaGCCTGTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACAccagc                <  2:783221/140‑1 (MQ=255)

                                                                                                                          gTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacaccaacacca                  >  2:1433866/1‑132 (MQ=255)

                                                                                                                          gTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacaccaaca                     <  2:861443/129‑1 (MQ=255)

                                                                                                                          gTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacaccaaca                     <  2:1533630/129‑1 (MQ=255)

                                                                                                                          gTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacaccaaca                     >  1:861443/1‑129 (MQ=255)

                                                                                                                          gTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGacaccaaca                     >  1:1533630/1‑129 (MQ=255)

                                                                                                                          gTAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTAt          >  1:1143312/1‑140 (MQ=255)

                                                                                                                           tAACGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATg         >  1:118029/1‑140 (MQ=255)

                                                                                                                            aaCGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGa        >  2:181724/1‑140 (MQ=255)

                                                                                                                             aCGTTCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAg       <  1:206809/140‑1 (MQ=255)

                                                                                                                                ttCTCGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAGCTg    >  1:1498225/1‑140 (MQ=255)

                                                                                                                                  ctcGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAGCTGGt  >  2:1682927/1‑140 (MQ=255)

                                                                                                                                  ctcGGCTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAGCTGGt  <  2:1131441/140‑1 (MQ=255)

GACCATCTCTAACTGGAAGAATGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAGCTGGT  >  NC_000913/3961087‑3961356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`