BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,962,223	T→C	L516P (CTG→CCG)	rep →	ATP‑dependent DNA helicase Rep

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,962,223	0	T	C	100.0%	540.3 / NA	148	L516P (CTG→CCG)	rep	ATP‑dependent DNA helicase Rep
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (78/70); total (78/70)

Only 100 of 150 total aligned reads displayed.

CCGATTGCCGCGGTGCGTGATCTGATCCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCTGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACTGATGACTCTCCACGCGTCGAA  >  NC_000913/3962087‑3962358

ccGATTGCCGCGGTGCGTGATCTGATCCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGa                                                                                                                                      <  2:1647404/140‑1 (MQ=255)

 cGATTGCCGCGGTGCGTGATCTGATCCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGAAGATGCCGGaa                                                                                                                                     <  2:1306913/140‑1 (MQ=255)

         gcgGTGCGTGATCTGATCCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGa                                                                                                                             <  1:1333793/140‑1 (MQ=255)

                       gatcCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGa                                                                                                               >  1:65779/1‑140 (MQ=255)

                       gatcCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGa                                                                                                               >  1:1413707/1‑140 (MQ=255)

                       gatcCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGa                                                                                                               <  2:347652/140‑1 (MQ=255)

                       gatcCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGa                                                                                                               >  2:413771/1‑140 (MQ=255)

                       gatcCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGa                                                                                                               >  2:68878/1‑140 (MQ=255)

                        atcCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGAt                                                                                                              >  2:1316397/1‑140 (MQ=255)

                        atcCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGAt                                                                                                              <  1:413771/140‑1 (MQ=255)

                         tcCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATg                                                                                                             >  2:709556/1‑140 (MQ=255)

                           catggcatggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGAc                                                                                                           <  1:50437/140‑1 (MQ=255)

                            atggcatggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACg                                                                                                          <  2:65779/140‑1 (MQ=255)

                            atggcatggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACg                                                                                                          <  2:1575397/140‑1 (MQ=255)

                             tggcatggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGc                                                                                                         >  2:1010390/1‑140 (MQ=255)

                             tggcatggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGc                                                                                                         >  1:1262667/1‑140 (MQ=255)

                              ggcatggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCt                                                                                                        >  1:201313/1‑140 (MQ=255)

                              ggcatggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCt                                                                                                        >  1:99541/1‑140 (MQ=255)

                              ggcatggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCt                                                                                                        <  2:192356/140‑1 (MQ=255)

                              ggcatggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCt                                                                                                        >  2:811254/1‑140 (MQ=255)

                              ggcatggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCt                                                                                                        >  2:927975/1‑140 (MQ=255)

                                catggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCa                                                                                                      >  2:478419/1‑140 (MQ=255)

                                catggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCa                                                                                                      <  1:643246/140‑1 (MQ=255)

                                  tggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGAt                                                                                                              >  1:1679102/1‑130 (MQ=255)

                                  tggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCAcc                                                                                                    >  1:91115/1‑140 (MQ=255)

                                  tggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCAcc                                                                                                    >  1:1418211/1‑140 (MQ=255)

                                  tggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCAcc                                                                                                    >  2:670413/1‑140 (MQ=255)

                                   ggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCAccc                                                                                                   <  2:595330/140‑1 (MQ=255)

                                   ggATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCAccc                                                                                                   <  2:99541/140‑1 (MQ=255)

                                     aTTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAg                                                                                                 >  1:1521815/1‑140 (MQ=255)

                                         tGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAggtgg                                                                                             >  1:797752/1‑140 (MQ=255)

                                         tGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAggtgg                                                                                             >  1:695853/1‑140 (MQ=255)

                                         cgAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAggtgg                                                                                             >  1:752132/2‑140 (MQ=255)

                                             tCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGTGCCGATGACGCTCACCCAGGTGGTGAc                                                                                         <  2:1099553/140‑1 (MQ=255)

                                             tCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGAc                                                                                         <  2:1075892/140‑1 (MQ=255)

                                             tCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGAc                                                                                         <  2:1347668/140‑1 (MQ=255)

                                             tCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGAc                                                                                         <  1:1462017/140‑1 (MQ=255)

                                             tCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGAc                                                                                         <  2:1367617/140‑1 (MQ=255)

                                              ccTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGAcg                                                                                        >  2:1032114/1‑140 (MQ=255)

                                              ccTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGAcg                                                                                        >  1:1321988/1‑140 (MQ=255)

                                              ccTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGAcg                                                                                        <  1:183267/140‑1 (MQ=255)

                                               cTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGAcgc                                                                                       >  2:1631081/1‑140 (MQ=255)

                                                tGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGAcgcg                                                                                      >  2:317879/1‑140 (MQ=255)

                                                 ggCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGgtggtg                                                                                           <  2:1262662/134‑1 (MQ=255)

                                                 ggCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGgtggtg                                                                                           >  1:1262662/1‑134 (MQ=255)

                                                 ggCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACgcgc                                                                                     >  2:1034723/1‑140 (MQ=255)

                                                 ggCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACgcgc                                                                                     >  2:107961/1‑140 (MQ=255)

                                                     gTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTa                                                                                 >  1:1229255/1‑140 (MQ=255)

                                                      tACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTAc                                                                                >  1:894878/1‑140 (MQ=255)

                                                       aCGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACt                                                                               <  1:1032114/140‑1 (MQ=255)

                                                       aCGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACt                                                                               >  2:1212819/1‑140 (MQ=255)

                                                          aaaCATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTg                                                                            <  1:709556/140‑1 (MQ=255)

                                                            ccATCGCCCAACCCAAAAGCCATGGAAATGAGCATGAAGCACGTCAACCAACTGTTTACCTGGATGACGGAGAGACCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTgcg                                                                          <  2:1492851/139‑1 (MQ=255)

                                                            aCATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTgcg                                                                          <  2:749917/140‑1 (MQ=255)

                                                            aCATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTgcg                                                                          <  2:894878/140‑1 (MQ=255)

                                                            aCATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTgcg                                                                          <  2:1101748/140‑1 (MQ=255)

                                                              aTCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGcgcg                                                                        <  1:1212819/140‑1 (MQ=255)

                                                                cGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGAcg                                                                                        <  2:171960/122‑1 (MQ=255)

                                                                cGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGAc                                                                      >  1:289084/1‑140 (MQ=255)

                                                                cGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGAc                                                                      <  1:1394084/140‑1 (MQ=255)

                                                                  cccAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGCCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACat                                                                    >  1:238694/1‑140 (MQ=255)

                                                                     aGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACatgat                                                                 <  2:797752/140‑1 (MQ=255)

                                                                       cccGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATgg                                                               <  2:695853/140‑1 (MQ=255)

                                                                        ccGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGa                                                              >  2:1383463/1‑140 (MQ=255)

                                                                         cGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAg                                                             <  1:317879/140‑1 (MQ=255)

                                                                               ccgccgAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCgtggt                                                       <  2:890999/140‑1 (MQ=255)

                                                                                cgccgAAATGCGCATGAAGAACGTAAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCgtggtg                                                      >  1:1656068/1‑140 (MQ=255)

                                                                                 gccgAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTga                                                     <  1:385420/140‑1 (MQ=255)

                                                                                 gccgAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTga                                                     >  2:76562/1‑140 (MQ=255)

                                                                                 gccgAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTga                                                     >  2:469990/1‑140 (MQ=255)

                                                                                 gccgAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTga                                                     <  1:1316397/140‑1 (MQ=255)

                                                                                         gcgcATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTgaag                                             >  1:663331/1‑140 (MQ=255)

                                                                                            cATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGaagaag                                          >  2:973025/1‑140 (MQ=255)

                                                                                               gaagaaCGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGc                                       <  1:1383463/140‑1 (MQ=255)

                                                                                               gaagaaCGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGc                                       <  2:957104/140‑1 (MQ=255)

                                                                                                 agaaCGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTg                                     >  2:134186/1‑140 (MQ=255)

                                                                                                    aCGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGAt                                  <  1:134186/140‑1 (MQ=255)

                                                                                                     cGTCAACCAACTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTgaaga                                            <  1:1495039/129‑1 (MQ=255)

                                                                                                          accaacTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTgaaga                                            >  1:1083535/1‑124 (MQ=255)

                                                                                                          accaacTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTg                            >  2:361677/1‑140 (MQ=255)

                                                                                                          accaacTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTg                            >  1:1009356/1‑140 (MQ=255)

                                                                                                           ccaacTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGc                           >  1:1177083/1‑140 (MQ=255)

                                                                                                            caacTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCa                          <  2:765695/140‑1 (MQ=255)

                                                                                                               cTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCATGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACt                       >  2:1493264/1‑140 (MQ=255)

                                                                                                               cTGTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACt                       >  2:1234143/1‑140 (MQ=255)

                                                                                                                 gTTTAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACtga                     <  1:1234143/140‑1 (MQ=255)

                                                                                                                  tttAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGAt                                  >  1:1595687/1‑126 (MQ=255)

                                                                                                                  tttAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCa                          <  2:218037/134‑1 (MQ=255)

                                                                                                                  tttAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCa                          >  1:218037/1‑134 (MQ=255)

                                                                                                                  tttAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACtgat                    >  1:1079504/1‑140 (MQ=255)

                                                                                                                  tttAGCTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACtgat                    >  1:1084971/1‑140 (MQ=255)

                                                                                                                     aGCTGGAGGCGGGAGATGCAGGAAGGCAGTGAACTGGATGCGCCGATGACGCTCACCCAGGTGGTGACGCGCTTCACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACTGATGAc                 >  2:1198729/1‑140 (MQ=255)

                                                                                                                       cTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCa                          <  1:455164/129‑1 (MQ=255)

                                                                                                                       cTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCa                          >  2:455164/1‑129 (MQ=255)

                                                                                                                       cTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACTGATGActc               >  2:402199/1‑140 (MQ=255)

                                                                                                                       cTGGATGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACTGATGActc               >  1:451708/1‑140 (MQ=255)

                                                                                                                            tGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCGCCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACTGATGACTCTCCAc          <  2:1557435/140‑1 (MQ=255)

                                                                                                                            tGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACtgat                    >  1:750561/1‑130 (MQ=255)

                                                                                                                            tGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACTGATGACTCTCCAc          <  1:811254/140‑1 (MQ=255)

                                                                                                                            tGACGGAGATGCCGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTCTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACTGATGACTCTCCAc          >  1:1019376/1‑140 (MQ=255)

CCGATTGCCGCGGTGCGTGATCTGATCCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCTGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACTGATGACTCTCCACGCGTCGAA  >  NC_000913/3962087‑3962358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`