| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,158,511 | T→C | Y8H (TAC→CAC) | oxyR → | DNA‑binding transcriptional dual regulator OxyR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,158,511 | 0 | T | C | 98.8% | 558.7 / ‑2.7 | 161 | Y8H (TAC→CAC) | oxyR | DNA‑binding transcriptional dual regulator OxyR |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (105/54); minor base A (1/1); total (106/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.29e-01 | |||||||||||
Only 100 of 171 total aligned reads displayed.
AGAGGTGCCGCTCCGTTTCTGTGAGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCG > NC_000913/4158376‑4158647 | agagGTGCCGCTCCGTTTCTGTGAGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCt > 2:1243453/1‑140 (MQ=255) ggTGCCGCTCCGTTTCTGTGAGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCtggt > 1:811251/1‑140 (MQ=255) tGCCGCTCCGTTTCTGTGAGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCtggtgg > 1:354261/1‑140 (MQ=255) ccGCTCCGTTTCTGTGAGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCa > 1:995879/1‑140 (MQ=255) gCTCCGTTTCTGTGAGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCa > 2:945649/1‑138 (MQ=255) gCTCCGTTTCTGTGAGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCAtt > 2:1456388/1‑140 (MQ=255) gTTTCTGTGAGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTg > 1:1346888/1‑140 (MQ=255) gtgAGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CAcc < 1:208753/140‑1 (MQ=255) aGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGcc > 2:1320894/1‑140 (MQ=255) ttATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCCCCTGGTGGCATTGGCTGAA‑CACCGCCAtttt < 1:428915/140‑1 (MQ=255) ttATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCATCTGGTGGCATTGGCTGAA‑CACCGCCAtttt > 2:1037897/1‑140 (MQ=255) ttATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCAtttt < 1:1314325/140‑1 (MQ=255) aTCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCg > 1:942299/1‑140 (MQ=255) agtcagAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCg < 1:1456388/140‑1 (MQ=255) gtcagAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGt < 2:789556/140‑1 (MQ=255) tcagAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTg > 1:317322/1‑140 (MQ=255) tcagAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTg < 1:687168/140‑1 (MQ=255) tcagAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTg < 1:1221835/140‑1 (MQ=255) aaTGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGc > 2:1322154/1‑140 (MQ=255) aTGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCTTGAACTATCGTGGCGATGGAGGATGGATAATAAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCa < 2:1047447/140‑1 (MQ=255) ggATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTg < 2:1212149/137‑1 (MQ=255) ggATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTg > 1:1212149/1‑137 (MQ=255) gATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCAc > 2:1200896/1‑140 (MQ=255) gATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCAc > 1:1407844/1‑140 (MQ=255) aTAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACg > 1:647811/1‑140 (MQ=255) aTAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACg > 2:274910/1‑140 (MQ=255) aTCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTa > 1:1124103/1‑140 (MQ=255) aTCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTa > 2:299496/1‑140 (MQ=255) gTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTagcc < 1:1037897/140‑1 (MQ=255) cATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTagccagc > 2:1607537/1‑140 (MQ=255) tGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGa > 2:824384/1‑140 (MQ=255) tGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGa > 1:1071406/1‑140 (MQ=255) tACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGc > 1:920151/1‑140 (MQ=255) ccTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTTATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCgg > 2:1150562/1‑140 (MQ=255) ccTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTag > 1:1644287/1‑122 (MQ=255) ccTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTag < 2:1644287/122‑1 (MQ=255) ccTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCgg > 2:1362231/1‑140 (MQ=255) ccTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCgg > 2:1476250/1‑140 (MQ=255) ccTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCgg > 2:778547/1‑140 (MQ=255) ccTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCgg > 1:705506/1‑140 (MQ=255) ccTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCgg > 1:738554/1‑140 (MQ=255) ccTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCg > 1:1626749/1‑139 (MQ=255) ccTATCGCCATGAACTATCGGGGGGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCgg < 2:1289917/140‑1 (MQ=255) aTCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCa < 2:1225954/140‑1 (MQ=255) aTCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCa > 1:602610/1‑140 (MQ=255) aTCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCa > 2:1622155/1‑140 (MQ=255) cGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCaaa > 2:599659/1‑140 (MQ=255) cGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCaaa > 2:1266626/1‑140 (MQ=255) cGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCaaa > 1:1582724/1‑140 (MQ=255) cGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCaaa > 2:512292/1‑140 (MQ=255) cGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCaaa > 2:554586/1‑140 (MQ=255) cGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCaaa > 1:1679030/1‑140 (MQ=255) cGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCaaa > 2:985841/1‑140 (MQ=255) tGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGt < 1:985841/140‑1 (MQ=255) tGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGt < 2:35683/140‑1 (MQ=255) tGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGt > 1:700720/1‑140 (MQ=255) tGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGt > 2:1633860/1‑140 (MQ=255) tGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGt < 1:16614/140‑1 (MQ=255) tGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGt > 2:937880/1‑140 (MQ=255) tGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGt > 1:35683/1‑140 (MQ=255) aaCTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTaa < 1:1102407/140‑1 (MQ=255) tATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCt < 1:172947/140‑1 (MQ=255) cGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCt < 1:1226357/137‑1 (MQ=255) cGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGa > 2:859510/1‑140 (MQ=255) gCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGAt > 1:274124/1‑140 (MQ=255) gCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGAt > 1:480565/1‑140 (MQ=255) gCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGAt > 1:617382/1‑140 (MQ=255) gCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGAACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGAt > 2:940238/1‑140 (MQ=255) tggtggATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGc < 2:1624485/140‑1 (MQ=255) tGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGc < 2:383716/140‑1 (MQ=255) tGGAGGATGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGc < 2:338090/140‑1 (MQ=255) ggaggaTGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAg < 1:509089/138‑1 (MQ=255) ggaggaTGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAg > 2:509089/1‑138 (MQ=255) ggaggaTGGATAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCt < 2:1582724/140‑1 (MQ=255) atggatAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CCCCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCg < 2:1643258/140‑1 (MQ=255) gatAATGAATATTCGTGATCTTGAGCCCCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa < 2:1276352/140‑1 (MQ=255) gatAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa > 1:1253119/1‑140 (MQ=255) gatAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa < 2:647811/140‑1 (MQ=255) gatAATGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa < 1:1607537/140‑1 (MQ=255) aTGAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGtt > 1:297945/1‑140 (MQ=255) gAATATTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGc < 2:641232/140‑1 (MQ=255) tatTCGTGATCTTGACCACCTGGTGGCTTTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTgg < 2:1247077/140‑1 (MQ=255) atTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATg < 2:1189876/132‑1 (MQ=255) atTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATg > 1:1189876/1‑132 (MQ=255) atTCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGa > 1:1601343/1‑140 (MQ=255) ttCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAg > 1:1496277/1‑140 (MQ=255) tCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa < 2:1256907/128‑1 (MQ=255) tCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa > 1:1256907/1‑128 (MQ=255) tCGTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGc > 2:68909/1‑140 (MQ=255) gTGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCgg < 1:959199/140‑1 (MQ=255) tGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGa > 1:133931/1‑140 (MQ=255) tGATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGa > 2:817562/1‑140 (MQ=255) gATCTTGAGCCCCTGGTGGCATTGG‑TGAACCCCCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGAc < 2:705506/140‑1 (MQ=255) gATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGAc < 1:1034752/140‑1 (MQ=255) gATCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGAc < 1:1476250/140‑1 (MQ=255) gATCTGGAGCCCTTGGTGGCATGGGCTGAA‑CCCCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGAc < 2:1496277/140‑1 (MQ=255) aTCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAg < 1:1255727/134‑1 (MQ=255) aTCTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGAcc > 2:727385/1‑140 (MQ=255) cTTGAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAg < 1:859510/140‑1 (MQ=255) gAGCACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCg < 1:554586/140‑1 (MQ=255) | AGAGGTGCCGCTCCGTTTCTGTGAGCAATTATCAGTCAGAATGCTTGATAGGGATAATCGTTCATTGCTATTCTACCTATCGCCATGAACTATCGTGGCGATGGAGGATGGATAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAA‑CACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCG > NC_000913/4158376‑4158647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |