BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,181,903	T→C	I220T (ATC→ACC)	rpoB →	RNA polymerase subunit beta

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,181,903	0	T	C	100.0%	454.1 / NA	124	I220T (ATC→ACC)	rpoB	RNA polymerase subunit beta
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (64/60); total (64/60)

Only 100 of 125 total aligned reads displayed.

GCGTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGAAAAA  >  NC_000913/4181766‑4182039

gcgTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGAccc                                                                                                                                        <  1:784271/140‑1 (MQ=255)

  gTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTc                                                                                                                                      >  1:910254/1‑140 (MQ=255)

  gTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTc                                                                                                                                      >  1:367783/1‑140 (MQ=255)

     tcatcCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGAc                                                                                                                                   <  2:211950/140‑1 (MQ=255)

     tcatcCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGAc                                                                                                                                   <  1:64669/140‑1 (MQ=255)

     tcatcCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGAc                                                                                                                                   <  2:1244324/140‑1 (MQ=255)

        tcCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTg                                                                                                                                >  2:1666866/1‑140 (MQ=255)

             tACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCtt                                                                                                                           >  2:446343/1‑140 (MQ=255)

              aCCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCttt                                                                                                                          >  1:363666/1‑140 (MQ=255)

              aCCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCttt                                                                                                                          >  2:526023/1‑140 (MQ=255)

                cGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGa                                                                                                                        <  2:602938/140‑1 (MQ=255)

                 gTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGaa                                                                                                                       <  1:1123673/140‑1 (MQ=255)

                  tGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGaaa                                                                                                                      >  2:775636/1‑140 (MQ=255)

                  tGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGaaa                                                                                                                      >  2:1083580/1‑140 (MQ=255)

                  tGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGaaa                                                                                                                      <  2:1464736/140‑1 (MQ=255)

                  tGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGaaa                                                                                                                      >  2:1428819/1‑140 (MQ=255)

                   ggTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTg                                                                                                                                >  1:233862/1‑129 (MQ=255)

                   ggTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTg                                                                                                                                <  2:233862/129‑1 (MQ=255)

                   ggTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGaaaa                                                                                                                     >  1:1575497/1‑140 (MQ=255)

                   ggTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGaaaa                                                                                                                     >  2:647843/1‑140 (MQ=255)

                    gTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGaaaaa                                                                                                                    >  1:1256671/1‑140 (MQ=255)

                       ccTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGtt                                                                                                                 <  1:1563095/140‑1 (MQ=255)

                         tggctggACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTAt                                                                                                               <  1:676524/140‑1 (MQ=255)

                          ggctggACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTg                                                                                                                         <  1:773449/129‑1 (MQ=255)

                          ggctggACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTg                                                                                                                         >  2:773449/1‑129 (MQ=255)

                            ctggACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCtt                                                                                                            >  2:887785/1‑140 (MQ=255)

                              ggACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTg                                                                                                          <  2:1572463/140‑1 (MQ=255)

                               gACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCATAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGa                                                                                                         >  2:808863/1‑140 (MQ=255)

                                 cTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGaaa                                                                                                       >  1:930436/1‑140 (MQ=255)

                                  ttCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAAt                                                                                                      >  2:1400227/1‑140 (MQ=255)

                                  ttCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAAt                                                                                                      <  1:597883/140‑1 (MQ=255)

                                     gAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCg                                                                                                   <  1:446343/140‑1 (MQ=255)

                                           gATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATaa                                                                                             <  1:647843/140‑1 (MQ=255)

                                            aTCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAAc                                                                                            >  2:1554593/1‑140 (MQ=255)

                                            aTCCGAAGGACAACCTGTTCGTACGTATCCACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAAc                                                                                            >  2:1154760/1‑140 (MQ=255)

                                              ccGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACaa                                                                                          <  2:363666/140‑1 (MQ=255)

                                               cGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAg                                                                                         <  1:1069318/140‑1 (MQ=255)

                                               cGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCATAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAg                                                                                         <  1:808863/140‑1 (MQ=255)

                                                      cAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGa                                                                                  >  2:867938/1‑140 (MQ=255)

                                                       aaCCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGAt                                                                                 >  1:1002101/1‑140 (MQ=255)

                                                         ccTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATgg                                                                               >  1:465288/1‑140 (MQ=255)

                                                         ccTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATgg                                                                               >  2:1132251/1‑140 (MQ=255)

                                                            gTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAAc                                                                            <  1:1110633/140‑1 (MQ=255)

                                                              tCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAg                                                                                         >  1:476761/1‑125 (MQ=255)

                                                              tCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAg                                                                                         <  2:476761/125‑1 (MQ=255)

                                                              tCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTg                                                                          >  2:1278557/1‑140 (MQ=255)

                                                              tCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTg                                                                          >  2:1010328/1‑140 (MQ=255)

                                                                          aCCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGc                                                              <  2:367783/140‑1 (MQ=255)

                                                                          aCCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGc                                                              <  1:1428819/140‑1 (MQ=255)

                                                                           ccGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGcc                                                             <  2:120784/140‑1 (MQ=255)

                                                                            cGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCt                                                            >  2:1296182/1‑140 (MQ=255)

                                                                             gTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTg                                                           <  1:1400227/140‑1 (MQ=255)

                                                                               cGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCg                                                         >  2:406519/1‑140 (MQ=255)

                                                                                gCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCgt                                                        >  2:84517/1‑140 (MQ=255)

                                                                                gCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCg                                                         >  2:1455052/1‑139 (MQ=255)

                                                                                gCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCg                                                         <  1:1455052/139‑1 (MQ=255)

                                                                                          gcctgcGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCg                                              <  1:603372/140‑1 (MQ=255)

                                                                                          gcctgcGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCg                                              <  2:223434/140‑1 (MQ=255)

                                                                                           cctgcGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAAccac                                             >  2:564949/1‑138 (MQ=255)

                                                                                               cGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCt                                         >  2:1523408/1‑140 (MQ=255)

                                                                                                 aCCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCttt                                       >  2:1104530/1‑140 (MQ=255)

                                                                                                        ttCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATc                                <  1:1010328/140‑1 (MQ=255)

                                                                                                        ttCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATc                                <  1:121341/140‑1 (MQ=255)

                                                                                                         tCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCg                               >  1:240992/1‑140 (MQ=255)

                                                                                                         tCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCg                               <  2:910254/140‑1 (MQ=255)

                                                                                                         tCTGCGCGCCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCg                               <  2:857322/140‑1 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                           >  1:232664/1‑140 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                           <  2:1128295/140‑1 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                           >  2:1474301/1‑140 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                           >  2:1048328/1‑140 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                           >  1:9459/1‑140 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                           <  2:465288/140‑1 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                           <  1:182988/140‑1 (MQ=255)

                                                                                                             cgcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                           <  1:577167/140‑1 (MQ=255)

                                                                                                              gcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCt                          <  2:1348793/140‑1 (MQ=255)

                                                                                                              gcgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCt                          <  1:1132251/140‑1 (MQ=255)

                                                                                                               cgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa                         >  1:592796/1‑140 (MQ=255)

                                                                                                               cgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa                         <  1:1523408/140‑1 (MQ=255)

                                                                                                               cgcCCTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa                         <  1:406519/140‑1 (MQ=255)

                                                                                                                 cccTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCg                               >  1:1199899/1‑132 (MQ=255)

                                                                                                                 cccTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCg                               <  2:1199899/132‑1 (MQ=255)

                                                                                                                  ccTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa                         <  2:933924/137‑1 (MQ=255)

                                                                                                                  ccTGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTa                         >  1:933924/1‑137 (MQ=255)

                                                                                                                    tGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGt                    <  1:231618/140‑1 (MQ=255)

                                                                                                                    tGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGt                    <  2:930436/140‑1 (MQ=255)

                                                                                                                    tGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGt                    <  1:1048328/140‑1 (MQ=255)

                                                                                                                    tGAACTACACCACAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGt                    <  1:887785/140‑1 (MQ=255)

                                                                                                                            accacAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                           <  2:1239569/125‑1 (MQ=255)

                                                                                                                            accacAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGc                           >  1:1239569/1‑125 (MQ=255)

                                                                                                                            accacAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGt                    <  1:154559/132‑1 (MQ=255)

                                                                                                                            accacAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGt                    >  2:154559/1‑132 (MQ=255)

                                                                                                                            accacAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTa            >  2:244743/1‑140 (MQ=255)

                                                                                                                            accacAGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTa            >  2:313180/1‑140 (MQ=255)

                                                                                                                              cacaGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACg          <  1:244743/140‑1 (MQ=255)

                                                                                                                                caGAGCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTa        >  2:509745/1‑140 (MQ=255)

                                                                                                                                  gagCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTTACATCGAAGCTAACGGTAAAGTGTACGTAGa      >  2:1131935/1‑140 (MQ=255)

                                                                                                                                   agCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaa     >  2:677330/1‑140 (MQ=255)

                                                                                                                                   agCAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaa     >  1:1095265/1‑140 (MQ=255)

                                                                                                                                     cAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaaaa   >  1:1366908/1‑140 (MQ=255)

                                                                                                                                     cAGACCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGaaaa   >  1:683734/1‑140 (MQ=255)

GCGTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGAAAAA  >  NC_000913/4181766‑4182039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`