Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,408,950	A→G	D766G (GAC→GGC)	rnr →	RNase R

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,408,950	0	A	G	100.0%	293.8 / NA	80	D766G (GAC→GGC)	rnr	RNase R
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (49/31);  total (49/31)

ACTTTAGCCTGATCTCCAGCGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGACAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCGAAGAAAAAAGTG  >  NC_000913/4408815‑4409086                                                                                                                                        |                                                                                                                                         aCTTTAGCCTGATCTCCAGCGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAgc                                                                                                                                      <  2:396168/140‑1 (MQ=255)            aTCTCCAGCGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCgg                                                                                                                           >  2:725051/1‑140 (MQ=255)            aTCTCCAGCGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCgg                                                                                                                           >  2:564126/1‑140 (MQ=255)               tcCAGCGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGt                                                                                                                          >  2:1128704/1‑138 (MQ=255)               tcCAGCGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGt                                                                                                                          <  1:1128704/138‑1 (MQ=255)                  aGCGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGaa                                                                                                                     <  2:173240/140‑1 (MQ=255)                    cGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGaaaa                                                                                                                   <  2:1359985/140‑1 (MQ=255)                    cGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGaaaa                                                                                                                   >  1:1324677/1‑140 (MQ=255)                      aaCGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGt                                                                                                                          <  2:1333543/131‑1 (MQ=255)                      aaCGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGt                                                                                                                          >  1:1333543/1‑131 (MQ=255)                      aaCGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGaaaaaa                                                                                                                 >  2:981880/1‑140 (MQ=255)                      aaCGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGaaaaaa                                                                                                                 >  1:226390/1‑140 (MQ=255)                      aaCGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGaaaaaa                                                                                                                 >  2:1521059/1‑140 (MQ=255)                         gcgcACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACg                                                                                                              <  1:1679623/140‑1 (MQ=255)                           gcACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGaa                                                                                                            >  1:1399442/1‑140 (MQ=255)                                 cgcAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGaa                                                                                                      >  1:1612401/1‑140 (MQ=255)                                   cAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAg                                                                                                    >  2:414261/1‑140 (MQ=255)                                   cAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAg                                                                                                    >  1:1379059/1‑140 (MQ=255)                                   cAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAg                                                                                                    <  2:1232792/140‑1 (MQ=255)                                    aaCGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTGCGCGGTGAGAAAAAAACGAAGCCGAAAgc                                                                                                   <  2:299183/140‑1 (MQ=255)                                     aCGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAgcg                                                                                                  <  1:565431/140‑1 (MQ=255)                                     aCGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAgcg                                                                                                  <  1:1239459/140‑1 (MQ=255)                                     aCGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAgcg                                                                                                  <  1:725051/140‑1 (MQ=255)                                         cGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGAAAACTTTGAGCCAGGCACCGCCTCCCGCGGGGAGAAAAAAAGAAACCGGAAAGCGGCga                                                                                              >  2:1680873/1‑140 (MQ=255)                                           gTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCgaag                                                                                            >  2:447735/1‑140 (MQ=255)                                           gTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCgaag                                                                                            >  1:1441545/1‑140 (MQ=255)                                                aCGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGaagaaaga                                                                                       >  2:815116/1‑140 (MQ=255)                                                    cgcgcgAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGaagaaa                                                                                         <  1:551915/134‑1 (MQ=255)                                                    cgcgcgAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGaagaaa                                                                                         >  2:551915/1‑134 (MQ=255)                                                    cgcgcgAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGAcgcg                                                                                   >  2:1643509/1‑140 (MQ=255)                                                      cgcgAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCgag                                                                                 >  1:596977/1‑140 (MQ=255)                                                      cgcgAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCgag                                                                                 >  1:416111/1‑140 (MQ=255)                                                      cgcgAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCgag                                                                                 >  2:147300/1‑140 (MQ=255)                                                      cgcgAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCgag                                                                                 >  1:855046/1‑140 (MQ=255)                                                           gaAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAg                                                                            <  1:229148/140‑1 (MQ=255)                                                                       aGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCAt                                                                >  2:1475274/1‑140 (MQ=255)                                                                         gCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCg                                                              >  1:1642388/1‑140 (MQ=255)                                                                          cGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAGAGCGAAAAAGCCATCgg                                                             >  2:1510075/1‑140 (MQ=255)                                                                          cGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCgg                                                             >  2:1444040/1‑140 (MQ=255)                                                                          cGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCgg                                                             >  1:1033472/1‑140 (MQ=255)                                                                             tGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGa                                                          >  2:274825/1‑140 (MQ=255)                                                                             tGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGa                                                          >  2:1312231/1‑140 (MQ=255)                                                                             tGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGa                                                          <  2:1653471/140‑1 (MQ=255)                                                                               cAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGaaa                                                        <  1:981880/140‑1 (MQ=255)                                                                                   tAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGc                                                    >  2:196597/1‑140 (MQ=255)                                                                                    aaaaaaGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCa                                                   >  2:567074/1‑140 (MQ=255)                                                                                    aaaaaaGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCa                                                   <  1:414261/140‑1 (MQ=255)                                                                                       aaaGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGaa                                                >  1:1126468/1‑140 (MQ=255)                                                                                            cggcAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAg                                           >  1:1615942/1‑140 (MQ=255)                                                                                            cggcAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAg                                           >  1:1383079/1‑140 (MQ=255)                                                                                            cggcAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAg                                           >  2:1127543/1‑140 (MQ=255)                                                                                            cggcAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAg                                           >  1:501242/1‑140 (MQ=255)                                                                                            cggcAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAg                                           >  2:1152637/1‑140 (MQ=255)                                                                                             ggcAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGc                                          >  2:1147077/1‑140 (MQ=255)                                                                                                 aGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCa                                      <  2:855046/140‑1 (MQ=255)                                                                                                   cgtcgtCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGc                                    <  1:196597/140‑1 (MQ=255)                                                                                                     tcgtcAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGa                                  <  1:1147077/140‑1 (MQ=255)                                                                                                      cgtcAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGAc                                 <  1:1127543/140‑1 (MQ=255)                                                                                                      cgtcAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGAc                                 <  1:1475274/140‑1 (MQ=255)                                                                                                       gtcAGGTCGGTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGAcc                                <  1:1653902/140‑1 (MQ=255)                                                                                                               ggTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAaagcgaa                        >  2:1270713/1‑140 (MQ=255)                                                                                                               ggTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAaagcgaa                        <  1:30888/140‑1 (MQ=255)                                                                                                               ggTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAaagcgaa                        >  1:287569/1‑140 (MQ=255)                                                                                                               ggTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAaagcgaa                        >  1:1588452/1‑140 (MQ=255)                                                                                                                gTAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAaagcgaag                       >  1:859490/1‑140 (MQ=255)                                                                                                                 tAAAAAGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACG‑‑GCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGt                    >  2:1664727/1‑140 (MQ=255)                                                                                                                    aaaGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCTAAGCGTg                   >  2:164194/1‑140 (MQ=255)                                                                                                                    aaaGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTg                   <  2:1399442/140‑1 (MQ=255)                                                                                                                      aGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTgcg                 <  1:1016086/140‑1 (MQ=255)                                                                                                                      aGGTAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTgcg                 <  2:226390/140‑1 (MQ=255)                                                                                                                         tAAACTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTgcggcg              >  1:1419869/1‑140 (MQ=255)                                                                                                                          aaaCTTTGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCga             >  1:1179457/1‑140 (MQ=255)                                                                                                                              tttGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCgaagaa         <  2:1615942/140‑1 (MQ=255)                                                                                                                              tttGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCgaagaa         <  2:1419869/140‑1 (MQ=255)                                                                                                                                tGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCGAAGaaaa       >  1:1412800/1‑140 (MQ=255)                                                                                                                                tGAGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCGAAGaaaa       <  2:1588452/140‑1 (MQ=255)                                                                                                                                  aGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTg                   >  1:817505/1‑126 (MQ=255)                                                                                                                                  aGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTg                   <  2:817505/126‑1 (MQ=255)                                                                                                                                  aGCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCGAAGaaaaaa     >  1:1393790/1‑140 (MQ=255)                                                                                                                                   gCCAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCGAAGAAAAAAg    >  2:1384810/1‑140 (MQ=255)                                                                                                                                     cAGGCAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCGAAGAAAAAAGTg  <  2:596977/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                         ACTTTAGCCTGATCTCCAGCGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGACAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCGAAGAAAAAAGTG  >  NC_000913/4408815‑4409086

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑