BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	531,867	A→G	Y119H (TAC→CAC)	allS ←	DNA‑binding transcriptional activator AllS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	531,867	0	A	G	100.0%	354.5 / NA	102	Y119H (TAC→CAC)	allS	DNA‑binding transcriptional activator AllS
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (55/47); total (55/47)

Only 100 of 102 total aligned reads displayed.

AAGGGATCAAGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTAACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTGGCATACTTTCCAGCCAGCT  >  NC_000913/531731‑532002

aaGGGATCAAGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACg                                                                                                                                      <  2:617440/140‑1 (MQ=255)

     aTCAAGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCAt                                                                                                                                 >  2:825949/1‑140 (MQ=255)

      tCAAGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCAtt                                                                                                                                >  2:1076826/1‑140 (MQ=255)

      tCAAGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCAtt                                                                                                                                >  1:637583/1‑140 (MQ=255)

      tCAAGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCAtt                                                                                                                                >  1:1270745/1‑140 (MQ=255)

      tCAAGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCAtt                                                                                                                                >  2:904802/1‑140 (MQ=255)

      tCAAGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCAtt                                                                                                                                >  1:933170/1‑140 (MQ=255)

       cAAGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTc                                                                                                                               >  1:1558701/1‑140 (MQ=255)

        aaGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCa                                                                                                                              <  1:904802/140‑1 (MQ=255)

        aaGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCa                                                                                                                              >  2:576703/1‑140 (MQ=255)

             tAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCAc                                                                                                                         >  2:358093/1‑140 (MQ=255)

                    aTTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCa                                                                                                                  >  1:714314/1‑140 (MQ=255)

                     tttGCCAGCGCCTCAGTTCCCGTGACGTCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCaa                                                                                                                 >  2:1501656/1‑140 (MQ=255)

                     tttGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCaa                                                                                                                 >  1:299502/1‑140 (MQ=255)

                            gcgcCTCAGTTCCTGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCg                                                                                                          >  1:575186/1‑140 (MQ=255)

                            gcgcCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCg                                                                                                          <  1:1076826/140‑1 (MQ=255)

                            gcgcCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCg                                                                                                          >  2:119986/1‑140 (MQ=255)

                            gcgcCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCg                                                                                                          >  2:1488354/1‑140 (MQ=255)

                             cgcCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGa                                                                                                         >  1:27123/1‑140 (MQ=255)

                             cgcCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGa                                                                                                         <  2:1270745/140‑1 (MQ=255)

                             cgcCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGa                                                                                                         >  1:1640154/1‑140 (MQ=255)

                             cgcCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGa                                                                                                         >  2:617246/1‑140 (MQ=255)

                             cgcCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGa                                                                                                         <  2:714314/140‑1 (MQ=255)

                             cgcCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGa                                                                                                         >  2:541009/1‑140 (MQ=255)

                                     ttCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTgg                                                                                                 <  1:135905/140‑1 (MQ=255)

                                        ccGTGACGTCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTggggg                                                                                              <  1:1501656/140‑1 (MQ=255)

                                        ccGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTggggg                                                                                              <  2:485227/140‑1 (MQ=255)

                                        ccGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTggggg                                                                                              <  2:1106311/140‑1 (MQ=255)

                                          gTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCGGCCACGCCAGCAACTGGGCGACGGCCTGGGGGtt                                                                                            >  2:1564806/1‑140 (MQ=255)

                                          gTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGtt                                                                                            >  1:1233124/1‑140 (MQ=255)

                                               gCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTgg                                                                                                 <  2:1225635/130‑1 (MQ=255)

                                               gCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTgg                                                                                                 >  1:1225635/1‑130 (MQ=255)

                                                ccGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCGGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTagag                                                                                      <  1:1564806/140‑1 (MQ=255)

                                                ccGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTagag                                                                                      <  1:119986/140‑1 (MQ=255)

                                                  gATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCa                                                                                    >  2:1652843/1‑140 (MQ=255)

                                                           cGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGgttg                                                                               >  2:301344/1‑136 (MQ=255)

                                                           cGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGgttg                                                                               <  1:301344/136‑1 (MQ=255)

                                                           cGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTtga                                                                           >  1:201049/1‑140 (MQ=255)

                                                           cGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTtga                                                                           >  2:956648/1‑140 (MQ=255)

                                                            gAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTtgat                                                                          <  2:1233124/140‑1 (MQ=255)

                                                              aaaaCCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTtgatga                                                                        <  1:1203483/140‑1 (MQ=255)

                                                              aaaaCCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTtgatga                                                                        <  2:933170/140‑1 (MQ=255)

                                                                    ttCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAatat                                                                  <  2:299502/140‑1 (MQ=255)

                                                                     tCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGttgttg                                                                            >  2:511690/1‑129 (MQ=255)

                                                                     tCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGttgttg                                                                            <  1:511690/129‑1 (MQ=255)

                                                                     tCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATAtt                                                                 >  2:1146822/1‑140 (MQ=255)

                                                                        tACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCAc                                                              >  1:244690/1‑140 (MQ=255)

                                                                           aaTAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTg                                                           <  1:428639/140‑1 (MQ=255)

                                                                            aTAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTgg                                                          <  2:5875/140‑1 (MQ=255)

                                                                            aTAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTgg                                                          <  1:1146822/140‑1 (MQ=255)

                                                                             tAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGc                                                         >  2:102402/1‑140 (MQ=255)

                                                                                cGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGtt                                                      >  1:1606726/1‑140 (MQ=255)

                                                                                cGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGtt                                                      >  1:1492702/1‑140 (MQ=255)

                                                                                  aGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTcc                                                    >  1:523803/1‑140 (MQ=255)

                                                                                  aGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTcc                                                    >  1:1521012/1‑140 (MQ=255)

                                                                                   gTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCa                                                   <  2:523803/140‑1 (MQ=255)

                                                                                     cccAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACg                                                 <  1:1652843/140‑1 (MQ=255)

                                                                                     cccAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACg                                                 >  2:139991/1‑140 (MQ=255)

                                                                                     cccAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACg                                                 <  1:565408/140‑1 (MQ=255)

                                                                                      ccAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGc                                                <  1:1488354/140‑1 (MQ=255)

                                                                                      ccAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGc                                                <  2:27123/140‑1 (MQ=255)

                                                                                      ccAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGc                                                <  2:201049/140‑1 (MQ=255)

                                                                                       cAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGcc                                               >  2:1490088/1‑140 (MQ=255)

                                                                                       cAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGcc                                               <  2:227687/140‑1 (MQ=255)

                                                                                       cAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGc                                                <  1:798241/139‑1 (MQ=255)

                                                                                       cAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGc                                                >  2:798241/1‑139 (MQ=255)

                                                                                        aGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCca                                              <  1:358093/140‑1 (MQ=255)

                                                                                            gCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCcatcat                                          >  2:1330596/1‑140 (MQ=255)

                                                                                            gCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCcatcat                                          <  1:1200621/140‑1 (MQ=255)

                                                                                              ccATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGATCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTc                                        >  2:371229/1‑140 (MQ=255)

                                                                                              ccATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTc                                        <  2:107291/140‑1 (MQ=255)

                                                                                              ccATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTc                                        >  2:340882/1‑140 (MQ=255)

                                                                                                atatAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCAc                                      >  1:474284/1‑140 (MQ=255)

                                                                                                 tataGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCAcc                                     >  2:802569/1‑140 (MQ=255)

                                                                                                        ttGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCa                              >  2:234321/1‑140 (MQ=255)

                                                                                                        ttGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCa                              >  1:948998/1‑140 (MQ=255)

                                                                                                        ttGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCa                              >  2:1486118/1‑140 (MQ=255)

                                                                                                        ttGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCa                              >  2:276803/1‑140 (MQ=255)

                                                                                                         tGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGATCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAg                             <  1:371229/140‑1 (MQ=255)

                                                                                                         tGTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAg                             <  1:139991/140‑1 (MQ=255)

                                                                                                          gTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACTCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGc                            >  1:911972/1‑140 (MQ=255)

                                                                                                          gTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGc                            >  2:1433821/1‑140 (MQ=255)

                                                                                                          gTCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGc                            >  1:1065063/1‑140 (MQ=255)

                                                                                                           tCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCt                           >  2:1264051/1‑140 (MQ=255)

                                                                                                           tCGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCt                           >  2:526092/1‑140 (MQ=255)

                                                                                                            cGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTc                          <  1:1264051/140‑1 (MQ=255)

                                                                                                            cGGGAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTc                          <  2:874211/140‑1 (MQ=255)

                                                                                                             gggAGATGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACTCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCg                         <  2:911972/140‑1 (MQ=255)

                                                                                                               gagaTGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCt                       <  1:613875/140‑1 (MQ=255)

                                                                                                                agaTGTGAAACTGGGTCAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCtt                      <  2:1521012/140‑1 (MQ=255)

                                                                                                                agaTGTGAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCtt                      <  1:1057794/140‑1 (MQ=255)

                                                                                                                     tgAAACTGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTGGCAt                 <  1:576703/140‑1 (MQ=255)

                                                                                                                           tGGGTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTGGCATACTTTc           >  1:195897/1‑140 (MQ=255)

                                                                                                                             ggTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTgg                    >  1:1304781/1‑129 (MQ=255)

                                                                                                                             ggTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTgg                    <  2:1304781/129‑1 (MQ=255)

                                                                                                                             ggTAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTGGCATACTTTcca         >  2:104775/1‑140 (MQ=255)

                                                                                                                               tAAAGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTGGCATACTTTccagc       <  1:104775/140‑1 (MQ=255)

                                                                                                                                aaaGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTGGCATACTTTccagcc      <  2:176311/140‑1 (MQ=255)

                                                                                                                                  aGGGGTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTGGCATACTTTccagccag    <  1:1433821/140‑1 (MQ=255)

                                                                                                                                    gggTGACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTGGCATACTTTCCAGCCAGCt  <  2:474284/140‑1 (MQ=255)

AAGGGATCAAGACTAAAGGTATTTGCCAGCGCCTCAGTTCCCGTGACGCCGATAGCCAGCGAAAAACCTTCGTACAATAGCGAGTCCCAGACGCCCATATAGATTTGTCGGGAGATGTGAAACTGGGTAAAGGGGTAACGCTCATTCAGCCACGCCAGCAACTGGGCGACGGCCTGGGGGTTGTAGAGCAGGTTGTTGATGACAATATTCACCTGGCGTTCCACGCCATCATTCACCTGTTGCAGCTCGCTTGGCATACTTTCCAGCCAGCT  >  NC_000913/531731‑532002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`