BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	47,100	A→G	T432A (ACC→GCC)	yaaU →	putative transporter YaaU

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	47,100	0	A	G	100.0%	505.8 / NA	138	T432A (ACC→GCC)	yaaU	putative transporter YaaU
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (64/74); total (64/74)

Only 100 of 141 total aligned reads displayed.

ACCTGGGCACTACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGACCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGAAAACAAAGGCGTAATCACGC  >  NC_000913/46965‑47236

aCCTGGGCACTACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAg                                                                                                                                      >  1:481517/1‑140 (MQ=255)

aCCTGGGCACTACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAg                                                                                                                                      <  1:1213144/140‑1 (MQ=255)

aCCTGGGCACTACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGGATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGCTGTCACTGGCGCAGGCCAg                                                                                                                                      >  1:1064004/1‑140 (MQ=255)

     ggCACTACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAata                                                                                                                                 >  2:189719/1‑140 (MQ=255)

     ggCACTACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAata                                                                                                                                 >  2:430/1‑140 (MQ=255)

     ggCACTACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTAGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAata                                                                                                                                 >  1:1481633/1‑140 (MQ=255)

          tACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACg                                                                                                                            >  2:975652/1‑140 (MQ=255)

               aTCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCcg                                                                                                                       <  1:571062/140‑1 (MQ=255)

               aTCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCcg                                                                                                                       >  2:1028935/1‑140 (MQ=255)

               aTCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCcg                                                                                                                       <  1:1283320/140‑1 (MQ=255)

               aTCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCcg                                                                                                                       <  2:1282950/140‑1 (MQ=255)

                    tATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGc                                                                                                                  <  2:770866/140‑1 (MQ=255)

                    tATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGc                                                                                                                  >  2:1263109/1‑140 (MQ=255)

                    tATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGc                                                                                                                  >  1:659097/1‑140 (MQ=255)

                     aTCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCa                                                                                                                 <  1:1208923/140‑1 (MQ=255)

                      tCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGAc                                                                                                                             >  1:970807/1‑127 (MQ=255)

                         ataatTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAgaga                                                                                                             <  1:220783/140‑1 (MQ=255)

                         ataatTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAgaga                                                                                                             <  2:377650/140‑1 (MQ=255)

                         ataatTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAgaga                                                                                                             <  2:980882/140‑1 (MQ=255)

                         ataatTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAgaga                                                                                                             <  1:1335161/140‑1 (MQ=255)

                          taatTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGaa                                                                                                            <  2:1598833/140‑1 (MQ=255)

                          taatTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGaa                                                                                                            >  1:1618316/1‑140 (MQ=255)

                          taatTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGaa                                                                                                            >  2:1130833/1‑140 (MQ=255)

                           aatTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAAt                                                                                                           <  2:509828/140‑1 (MQ=255)

                           aatTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTATTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAAt                                                                                                           <  1:421440/140‑1 (MQ=255)

                            atTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATg                                                                                                          >  2:1481482/1‑140 (MQ=255)

                                    aTCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAAt                                                                                                  >  2:468912/1‑140 (MQ=255)

                                     tCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAAtt                                                                                                 >  2:701148/1‑140 (MQ=255)

                                     tCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAAtt                                                                                                 >  1:1685764/1‑140 (MQ=255)

                                        gTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGtt                                                                                              <  2:436116/140‑1 (MQ=255)

                                         tAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTc                                                                                             <  2:49478/140‑1 (MQ=255)

                                         tAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTc                                                                                             <  1:672087/140‑1 (MQ=255)

                                          aaCACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATgggg                                                                                                       <  1:823235/129‑1 (MQ=255)

                                           acacGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAg                                                                                           >  2:1389395/1‑140 (MQ=255)

                                              cGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGAtt                                                                                        <  1:762392/140‑1 (MQ=255)

                                              cGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGAtt                                                                                        <  2:1685764/140‑1 (MQ=255)

                                               gATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGAttt                                                                                       >  1:1282734/1‑140 (MQ=255)

                                                 tGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTtct                                                                                     >  2:576967/1‑140 (MQ=255)

                                                 tGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTtct                                                                                     >  2:652447/1‑140 (MQ=255)

                                                 tGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTtct                                                                                     >  1:739274/1‑140 (MQ=255)

                                                   cTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGGGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTtctct                                                                                   >  2:917525/1‑140 (MQ=255)

                                                   cTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTaaa                                                                                                   <  1:1426260/124‑1 (MQ=255)

                                                   cTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTaaa                                                                                                   >  2:1426260/1‑124 (MQ=255)

                                                   cTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTtctct                                                                                   >  2:65115/1‑140 (MQ=255)

                                                           ggCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTg                                                                           >  1:1029823/1‑140 (MQ=255)

                                                           ggCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTg                                                                           >  2:1315071/1‑140 (MQ=255)

                                                           ggCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTg                                                                           >  2:736411/1‑140 (MQ=255)

                                                           ggCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTg                                                                           >  1:1432838/1‑140 (MQ=255)

                                                            gCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGa                                                                          <  2:1558158/140‑1 (MQ=255)

                                                              gggTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCTGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAAt                                                                        <  1:430/140‑1 (MQ=255)

                                                              gggTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAAt                                                                        <  1:779640/140‑1 (MQ=255)

                                                              gggTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAAt                                                                        <  1:701148/140‑1 (MQ=255)

                                                              gggTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAAt                                                                        <  1:65115/140‑1 (MQ=255)

                                                              gggTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAAt                                                                        <  2:599450/140‑1 (MQ=255)

                                                               ggTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATc                                                                       >  1:746342/1‑140 (MQ=255)

                                                                gaaTCTCGCTGTTTGGCCTGTTGATTTACGAAAGGTTTGCCCCGGAGGCTTGGAGGATGTTCCTGGCGCAAGCCAGCAATATGACGATCCGCCGGCAGAGAATGGGGTAAAATGTTCAAATTTCTCTCTTTTCTGAATCa                                                                      >  2:1203001/3‑140 (MQ=255)

                                                                gTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTTACTGGCGCAGGCCAGCAATATGACGATTCGCGGGCAGAGGATGGGGTAAATTGTTCTGATTTCTCTTATTTCTGAATCa                                                                      >  2:1178378/1‑140 (MQ=255)

                                                                gTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCa                                                                      <  2:739274/140‑1 (MQ=255)

                                                                 tATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCaa                                                                     >  2:1425308/1‑140 (MQ=255)

                                                                   tctcGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAata                                                                   <  2:1432838/140‑1 (MQ=255)

                                                                      cGCTGTTTGGCTTTTTGATTTCCGTACCTTTGCCCCCGGAGCCTCGAGGGATGTAATTGGCGCAGCCCGGCAATATGACGATCGGC‑GGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAAtattat                                                               <  2:100042/140‑1 (MQ=255)

                                                                       gCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAAtattat                                                               <  2:1262649/140‑1 (MQ=255)

                                                                       gCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAAtattat                                                               <  1:1460042/140‑1 (MQ=255)

                                                                          gTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGa                                                            >  1:264428/1‑140 (MQ=255)

                                                                           tttGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGAc                                                           >  2:1069957/1‑140 (MQ=255)

                                                                             tGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACta                                                         >  2:1021195/1‑140 (MQ=255)

                                                                                cTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAAtattat                                                               <  1:1590931/131‑1 (MQ=255)

                                                                                cTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAAtattat                                                               >  2:1590931/1‑131 (MQ=255)

                                                                                  tgttgATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGc                                                    <  1:468912/140‑1 (MQ=255)

                                                                                   gttgATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAAtattat                                                               <  2:1387305/128‑1 (MQ=255)

                                                                                   gttgATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAAtattat                                                               >  1:1387305/1‑128 (MQ=255)

                                                                                       aTTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGt                                               <  2:1319677/140‑1 (MQ=255)

                                                                                       aTTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGt                                               <  2:659097/140‑1 (MQ=255)

                                                                                       aTTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGt                                               <  1:189719/140‑1 (MQ=255)

                                                                                       aTTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGt                                               <  1:665197/140‑1 (MQ=255)

                                                                                       aTTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGt                                               <  2:332232/140‑1 (MQ=255)

                                                                                       aTTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGt                                               <  2:1298808/140‑1 (MQ=255)

                                                                                          tCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGaa                                            <  2:264428/140‑1 (MQ=255)

                                                                                          tCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGaa                                            <  2:1695867/140‑1 (MQ=255)

                                                                                            cGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAata                                          <  1:602233/140‑1 (MQ=255)

                                                                                            cGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAata                                          <  1:1021195/140‑1 (MQ=255)

                                                                                            cGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAata                                          <  2:1282734/140‑1 (MQ=255)

                                                                                            cGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAata                                          <  2:695601/140‑1 (MQ=255)

                                                                                            cGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAata                                          <  1:1633070/140‑1 (MQ=255)

                                                                                              tAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAatata                                        >  2:276218/1‑140 (MQ=255)

                                                                                              tAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAatata                                        >  2:905174/1‑140 (MQ=255)

                                                                                              tAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAatata                                        <  2:1230444/140‑1 (MQ=255)

                                                                                              tAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGCAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAatata                                        >  1:1220837/1‑140 (MQ=255)

                                                                                                   tttGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACt                                   >  1:877189/1‑140 (MQ=255)

                                                                                                      gCCCCGGAGACTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTaca                                >  1:705500/1‑140 (MQ=255)

                                                                                                                cTCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGa                      <  1:1028935/140‑1 (MQ=255)

                                                                                                                 tCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGaa                     >  1:1262208/1‑140 (MQ=255)

                                                                                                                 tCGAGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGaa                     >  2:1485966/1‑140 (MQ=255)

                                                                                                                    aGGGATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGAAAAc                  <  1:519453/140‑1 (MQ=255)

                                                                                                                     gggATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGAAAACa                 <  1:412854/140‑1 (MQ=255)

                                                                                                                     gggATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGAAAACa                 <  1:1243937/140‑1 (MQ=255)

                                                                                                                      ggATGTCACTGGCGCAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGAAAACaa                >  1:509510/1‑140 (MQ=255)

                                                                                                                                 gcgcAGGCCATCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGAAAACAAAGGCGTAATCa     <  1:1164445/140‑1 (MQ=255)

                                                                                                                                   gcAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGAAAACAAAGGCGTAATCAcg   <  1:173862/140‑1 (MQ=255)

                                                                                                                                    cAGGCCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGAAAACAAAGGCGTAATCAcgc  <  1:1278315/140‑1 (MQ=255)

ACCTGGGCACTACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGACCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAAATTGTTCAGATTTCTCTCTTTTCTGAATCAATATTATTGACTATAAGCCGCGTGAATATATGACTACACTTTGTGGGAAAACAAAGGCGTAATCACGC  >  NC_000913/46965‑47236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`