BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	967,145	A→G	A175A (GCA→GCG)	msbA →	ATP‑binding lipopolysaccharide transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	967,145	0	A	G	100.0%	371.8 / NA	101	A175A (GCA→GCG)	msbA	ATP‑binding lipopolysaccharide transport protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (55/46); total (55/46)

Only 100 of 102 total aligned reads displayed.

CAGGTTGCTTCTTCTTCTTCCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCACCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAAAGAAGTATTGATTTT  >  NC_000913/967020‑967279

cAGGTTGCTTCTTCTTCTTCCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGAt                                                                                                                          <  1:570218/140‑1 (MQ=255)

   gTTGCTTCTTCTTCTTCCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGc                                                                                                                       >  2:1022085/1‑140 (MQ=255)

     tGCTTCTTCTTCTTCCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGa                                                                                                                     >  2:1667700/1‑140 (MQ=255)

      gCTTCTTCTTCTTCCGGCGCACTGATTACTGTTGTGCGTGAAGGGGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGAt                                                                                                                    >  2:1523627/1‑140 (MQ=255)

       cttcttcttcttCCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGAtt                                                                                                                   <  1:1667700/140‑1 (MQ=255)

           ttcttcttcCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTcgcg                                                                                                               <  1:887062/140‑1 (MQ=255)

             cttcttcCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGAt                                                                                                                          <  1:1585001/127‑1 (MQ=255)

             cttcttcCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGAt                                                                                                                          >  2:1585001/1‑127 (MQ=255)

             cttcttcCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTcgcg                                                                                                               <  2:875664/138‑1 (MQ=255)

             cttcttcCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGtt                                                                                                             >  2:1037112/1‑140 (MQ=255)

             cttcttcCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGtt                                                                                                             >  1:1222982/1‑140 (MQ=255)

             cttcttcCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGtt                                                                                                             >  2:1488820/1‑140 (MQ=255)

                cttcCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTa                                                                                                          >  1:1162239/1‑140 (MQ=255)

                     ggCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGAt                                                                                                                    <  2:131548/125‑1 (MQ=255)

                     ggCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGAt                                                                                                                    >  1:131548/1‑125 (MQ=255)

                      gcgcACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGGCTGTTCATCATGATGTTCGATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTcg                                                                                                                 >  2:1512559/1‑127 (MQ=255)

                      gcgcACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTcg                                                                                                                 <  1:1512559/127‑1 (MQ=255)

                       cgcACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGc                                                                                                   >  1:1117622/1‑140 (MQ=255)

                          aCTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGtt                                                                                                <  2:439740/140‑1 (MQ=255)

                          aCTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGtt                                                                                                >  2:25601/1‑140 (MQ=255)

                          aCTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGtt                                                                                                <  2:1162239/140‑1 (MQ=255)

                          aCTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGtt                                                                                                <  1:1520914/140‑1 (MQ=255)

                          aCTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGtt                                                                                                <  2:577347/140‑1 (MQ=255)

                           cTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGttt                                                                                               >  2:1003587/1‑140 (MQ=255)

                            tGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGtttt                                                                                              >  1:1340911/1‑140 (MQ=255)

                               ttACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGc                                                                                           <  1:1022085/140‑1 (MQ=255)

                                    gttgtGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACAt                                                                                      <  2:880430/140‑1 (MQ=255)

                                      tgtgCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCa                                                                                    >  1:88104/1‑140 (MQ=255)

                                      tgtgCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCa                                                                                    >  2:610274/1‑140 (MQ=255)

                                      tgtgCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCa                                                                                    >  1:12321/1‑140 (MQ=255)

                                        tgCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGt                                                                                  >  1:1628890/1‑140 (MQ=255)

                                        tgCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGt                                                                                  >  1:962045/1‑140 (MQ=255)

                                        tgCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGt                                                                                  >  1:1422694/1‑140 (MQ=255)

                                        tgCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGt                                                                                  >  1:351375/1‑140 (MQ=255)

                                        tgCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGt                                                                                  >  2:836974/1‑140 (MQ=255)

                                        tgCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGt                                                                                  >  2:936438/1‑140 (MQ=255)

                                          cGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTaa                                                                                >  2:290715/1‑140 (MQ=255)

                                          cGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTaa                                                                                >  1:1136730/1‑140 (MQ=255)

                                          cGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTa                                                                                 >  2:125191/1‑139 (MQ=255)

                                          cGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTa                                                                                 <  1:125191/139‑1 (MQ=255)

                                            tGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTaaaa                                                                              >  1:397109/1‑140 (MQ=255)

                                            tGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTaaaa                                                                              <  1:1488820/140‑1 (MQ=255)

                                            tGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTaaaa                                                                              <  1:1037112/140‑1 (MQ=255)

                                               aGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACa                                                                           >  1:1385009/1‑140 (MQ=255)

                                                 gTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATg                                                                         <  1:365428/140‑1 (MQ=255)

                                                 gTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATg                                                                         <  2:816826/140‑1 (MQ=255)

                                                  tGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGc                                                                        <  1:1003587/140‑1 (MQ=255)

                                                   gCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCa                                                                       <  1:1501668/140‑1 (MQ=255)

                                                   gCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCa                                                                       <  1:936438/140‑1 (MQ=255)

                                                    cGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAg                                                                      <  2:1136730/140‑1 (MQ=255)

                                                    cGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAg                                                                      <  1:968076/140‑1 (MQ=255)

                                                      tCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGaa                                                                    <  2:12321/140‑1 (MQ=255)

                                                      tCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGaa                                                                    <  1:712543/140‑1 (MQ=255)

                                                      tCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGaa                                                                    <  2:155089/140‑1 (MQ=255)

                                                      tCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGaa                                                                    <  2:1628890/140‑1 (MQ=255)

                                                         atcatcGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAacac                                                                 >  1:1329524/1‑140 (MQ=255)

                                                           catcGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCa                                                               <  1:836974/140‑1 (MQ=255)

                                                                gCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATgggg                                                          <  1:1577752/140‑1 (MQ=255)

                                                                    gTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAgg                                                      >  1:308512/1‑140 (MQ=255)

                                                                     ttCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGt                                                     >  2:1021298/1‑140 (MQ=255)

                                                                      tcatcaTGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTg                                                    <  2:1363400/140‑1 (MQ=255)

                                                                          catGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGacca                                                >  1:818788/1‑140 (MQ=255)

                                                                          catGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGacca                                                >  1:38224/1‑140 (MQ=255)

                                                                          catGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGacca                                                >  1:265975/1‑140 (MQ=255)

                                                                           atgatgTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGaccac                                               <  1:459822/140‑1 (MQ=255)

                                                                               tgTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAgc                                           >  2:945862/1‑140 (MQ=255)

                                                                                 ttCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAgcgc                                         <  1:629557/140‑1 (MQ=255)

                                                                                 ttCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAgcgc                                         <  2:1422694/140‑1 (MQ=255)

                                                                                   cTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAg                                       >  2:876877/1‑140 (MQ=255)

                                                                                    tATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGa                                      >  1:1002723/1‑140 (MQ=255)

                                                                                     aTTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGaa                                     <  2:38224/140‑1 (MQ=255)

                                                                                      ttACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAAc                                    >  1:1493366/1‑140 (MQ=255)

                                                                                        aCAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACaa                                  <  1:1523627/140‑1 (MQ=255)

                                                                                        aCAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACaa                                  <  1:47172/140‑1 (MQ=255)

                                                                                         cAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACaaa                                 >  2:433663/1‑140 (MQ=255)

                                                                                           gTTGGCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATg                               >  1:114596/1‑140 (MQ=255)

                                                                                           gTTGGCAACTGTCGATAATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATg                               >  1:701072/1‑140 (MQ=255)

                                                                                              ggCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAgcg                                          <  2:109578/126‑1 (MQ=255)

                                                                                              ggCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAgcg                                          >  1:109578/1‑126 (MQ=255)

                                                                                              ggCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTg                            >  2:1261399/1‑140 (MQ=255)

                                                                                              ggCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTg                            >  2:158619/1‑140 (MQ=255)

                                                                                              ggCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTg                            >  1:259701/1‑140 (MQ=255)

                                                                                              ggCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTg                            >  1:538539/1‑140 (MQ=255)

                                                                                              ggCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTg                            >  2:354405/1‑140 (MQ=255)

                                                                                               gCAACTGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGa                           >  1:1280167/1‑140 (MQ=255)

                                                                                                    tGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGc                      >  1:101816/1‑140 (MQ=255)

                                                                                                    tGTCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGc                      <  2:88104/140‑1 (MQ=255)

                                                                                                      tCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCca                    >  2:249196/1‑140 (MQ=255)

                                                                                                      tCGATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCca                    <  1:876877/140‑1 (MQ=255)

                                                                                                        gATCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCcaca                  <  2:818788/140‑1 (MQ=255)

                                                                                                          tCATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACaaa                <  2:1280167/140‑1 (MQ=255)

                                                                                                           cATTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAaag               <  2:114596/140‑1 (MQ=255)

                                                                                                            aTTTTGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAaaga              <  2:351375/140‑1 (MQ=255)

                                                                                                              tttGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAaagaag            >  1:783301/1‑140 (MQ=255)

                                                                                                                tGATTGTGCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAAAGAAGTa          >  1:797250/1‑140 (MQ=255)

                                                                                                                    tgtgCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACaa                 >  1:1031332/1‑129 (MQ=255)

                                                                                                                    tgtgCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACaa                 <  2:1031332/129‑1 (MQ=255)

                                                                                                                    tgtgCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAAAGAAGTATTGa      >  1:697521/1‑140 (MQ=255)

                                                                                                                     gtgCTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAAAGAAGTATTGAt     <  2:1222982/140‑1 (MQ=255)

                                                                                                                        cTGGCGCCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAAAGAAGTATTGAtttt  >  1:278792/1‑140 (MQ=255)

CAGGTTGCTTCTTCTTCTTCCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCACCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAAAGAAGTATTGATTTT  >  NC_000913/967020‑967279

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`