Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,597,074 T→C pseudogene (1013/5422 nt) yneO ← AIDA‑I family autotransporter YneO

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,597,0740TC100.0% 452.4 / NA 123pseudogene (1013/5422 nt)yneOAIDA‑I family autotransporter YneO
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (56/67);  total (56/67)

Only 100 of 123 total aligned reads displayed.

TTGCCTGTGCCTGTTTCTTTCATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAATTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAATATCCATTATAG  >  NC_000913/1596939‑1597208
                                                                                                                                       |                                                                                                                                      
ttGCCTGTGCCTGTTTCTTTCATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCa                                                                                                                                    >  2:340767/1‑140 (MQ=255)
ttGCCTGTGCCTGTTTCTTTCATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCa                                                                                                                                    <  1:592598/140‑1 (MQ=255)
  gcctgtgcctgtTTCTTTCATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAAt                                                                                                                                  >  2:1353863/1‑140 (MQ=255)
   cctgtgcctgtTTCTTTCATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATg                                                                                                                                 <  1:1353863/140‑1 (MQ=255)
     tgtgcctgtTTCTTTCATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGcc                                                                                                                               >  2:1421236/1‑140 (MQ=255)
       tgcctgtTTCTTTCATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCt                                                                                                                             >  2:614483/1‑140 (MQ=255)
            gtTTCTTTCATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATc                                                                                                                        >  2:198878/1‑140 (MQ=255)
             tttctttcATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACACGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCg                                                                                                                       <  1:562451/140‑1 (MQ=255)
               tctttcATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGt                                                                                                                     >  2:1059328/1‑140 (MQ=255)
                ctttcATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTc                                                                                                                    <  1:956310/140‑1 (MQ=255)
                  ttcATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCAc                                                                                                                  >  1:95201/1‑140 (MQ=255)
                      tCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACATTg                                                                                                              >  1:127182/1‑140 (MQ=255)
                          cGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCAc                                                                                                                  <  2:1681925/132‑1 (MQ=255)
                          cGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCAc                                                                                                                  >  1:1681925/1‑132 (MQ=255)
                                 aTAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTg                                                                                                   >  2:271509/1‑140 (MQ=255)
                                   aaTTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTggg                                                                                                 >  1:234268/1‑140 (MQ=255)
                                     ttCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGaa                                                                                               <  2:956126/140‑1 (MQ=255)
                                       cccGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAAcc                                                                                             <  2:1601136/140‑1 (MQ=255)
                                         cGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGt                                                                                           >  1:361491/1‑140 (MQ=255)
                                           aaTCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTcc                                                                                         >  2:599977/1‑140 (MQ=255)
                                           aaTCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTcc                                                                                         >  1:194778/1‑140 (MQ=255)
                                             tCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTg                                                                                       >  2:1379462/1‑140 (MQ=255)
                                               tACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGaa                                                                                     >  2:900193/1‑140 (MQ=255)
                                                aCTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAAc                                                                                    >  1:74485/1‑140 (MQ=255)
                                                 cTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACg                                                                                   <  2:74485/140‑1 (MQ=255)
                                                 cTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCATGGGAACCGTCCTGAACg                                                                                   >  1:1141320/1‑140 (MQ=255)
                                                   ttGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGcc                                                                                 <  2:1067359/140‑1 (MQ=255)
                                                   ttGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGcc                                                                                 <  1:1668388/140‑1 (MQ=255)
                                                     gCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCcca                                                                               <  2:226658/140‑1 (MQ=255)
                                                      ccTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCccac                                                                              >  2:1576241/1‑140 (MQ=255)
                                                       cTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCccacc                                                                             <  1:254894/140‑1 (MQ=255)
                                                       cTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCccacc                                                                             <  1:340767/140‑1 (MQ=255)
                                                         tCACTCGAGACATTAAGCTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGcc                                                                                 >  1:993823/1‑134 (MQ=255)
                                                           aCTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGcc                                                                                 <  1:764574/132‑1 (MQ=255)
                                                           aCTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCcca                                                                               <  2:1022214/134‑1 (MQ=255)
                                                           aCTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCcca                                                                               >  1:1022214/1‑134 (MQ=255)
                                                           aCTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATg                                                                         >  2:914761/1‑140 (MQ=255)
                                                                agaCATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGcc                                                                                 <  1:1074159/127‑1 (MQ=255)
                                                                agaCATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGcc                                                                                 >  2:1074159/1‑127 (MQ=255)
                                                                agaCATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAatat                                                                    >  1:517686/1‑140 (MQ=255)
                                                                   cATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCt                                                                 <  2:721695/140‑1 (MQ=255)
                                                                   cATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCt                                                                 <  1:241213/140‑1 (MQ=255)
                                                                    aTTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTTCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCtt                                                                <  1:686073/140‑1 (MQ=255)
                                                                    aTTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCtt                                                                <  2:1555369/140‑1 (MQ=255)
                                                                    aTTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCtt                                                                <  1:1576241/140‑1 (MQ=255)
                                                                    aTTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCtt                                                                <  1:1127791/140‑1 (MQ=255)
                                                                    aTTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCtt                                                                <  2:176496/140‑1 (MQ=255)
                                                                    aTTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCtt                                                                <  1:1379462/140‑1 (MQ=255)
                                                                    aTTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCtt                                                                <  2:234268/140‑1 (MQ=255)
                                                                     ttAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCccacc                                                                             >  2:446794/1‑126 (MQ=255)
                                                                      tAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTg                                                              <  1:1042916/140‑1 (MQ=255)
                                                                              ccGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAAt                                                      >  1:108825/1‑140 (MQ=255)
                                                                              ccGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAAt                                                      <  2:64787/140‑1 (MQ=255)
                                                                              ccGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAAt                                                      <  2:108825/140‑1 (MQ=255)
                                                                              ccGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAAt                                                      <  2:866078/140‑1 (MQ=255)
                                                                                gTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGACCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCa                                                    <  2:186327/140‑1 (MQ=255)
                                                                                  cGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGt                                                  <  2:1285516/140‑1 (MQ=255)
                                                                                   gCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTc                                                 <  1:914761/140‑1 (MQ=255)
                                                                                    ccAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTcc                                                >  1:962995/1‑140 (MQ=255)
                                                                                    ccAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTcc                                                >  2:1317228/1‑140 (MQ=255)
                                                                                     cAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACATTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCa                                               <  2:127182/140‑1 (MQ=255)
                                                                                        cATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCatta                                            >  2:287456/1‑140 (MQ=255)
                                                                                           cACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTg                                         <  1:614483/140‑1 (MQ=255)
                                                                                           cACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTg                                         <  1:198878/140‑1 (MQ=255)
                                                                                             ccGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGa                                       <  1:1618359/140‑1 (MQ=255)
                                                                                                 tatagatatagCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAata                                   <  2:978627/140‑1 (MQ=255)
                                                                                                 tatagatatagCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAata                                   <  2:691800/140‑1 (MQ=255)
                                                                                                       tatagCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACt                             <  2:1424637/140‑1 (MQ=255)
                                                                                                       tatagCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACt                             >  1:754609/1‑140 (MQ=255)
                                                                                                        atagCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTgg                                        <  2:596334/128‑1 (MQ=255)
                                                                                                          agCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACtgtg                          >  1:867186/1‑140 (MQ=255)
                                                                                                          agCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACtgtg                          >  2:1666122/1‑140 (MQ=255)
                                                                                                          agCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACtgtg                          >  1:359454/1‑140 (MQ=255)
                                                                                                          agCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACtgtg                          >  1:291212/1‑140 (MQ=255)
                                                                                                          agCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGGCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACtgtg                          >  2:1414900/1‑140 (MQ=255)
                                                                                                           gCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGc                         <  2:95201/140‑1 (MQ=255)
                                                                                                           gCGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGc                         >  1:691937/1‑140 (MQ=255)
                                                                                                            cGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGcc                        >  1:511463/1‑140 (MQ=255)
                                                                                                            cGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGc                         <  2:987938/139‑1 (MQ=255)
                                                                                                            cGGAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGc                         >  1:987938/1‑139 (MQ=255)
                                                                                                             ggAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCa                       <  1:271509/140‑1 (MQ=255)
                                                                                                              gAAAGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCAt                      <  2:691937/140‑1 (MQ=255)
                                                                                                               aaaGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGc                         >  1:1336626/1‑136 (MQ=255)
                                                                                                               aaaGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCAtt                     >  2:370002/1‑140 (MQ=255)
                                                                                                                aaGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACtgtg                          <  1:1472667/134‑1 (MQ=255)
                                                                                                                 aGCTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTAc                   >  2:1603577/1‑140 (MQ=255)
                                                                                                                   cTTCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCg                 >  1:664450/1‑140 (MQ=255)
                                                                                                                     tCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGaa               <  2:511463/140‑1 (MQ=255)
                                                                                                                     tCGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGaa               <  1:1317228/140‑1 (MQ=255)
                                                                                                                      cGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGaa               >  2:1273984/1‑139 (MQ=255)
                                                                                                                      cGCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGaa               <  1:1273984/139‑1 (MQ=255)
                                                                                                                       gCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAat             <  1:1421236/140‑1 (MQ=255)
                                                                                                                       gCCCGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAat             <  2:867186/140‑1 (MQ=255)
                                                                                                                         ccGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAatat           <  1:1071836/140‑1 (MQ=255)
                                                                                                                         ccGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAatat           <  2:754609/140‑1 (MQ=255)
                                                                                                                         ccGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAatat           <  1:370002/140‑1 (MQ=255)
                                                                                                                         ccGTTCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAatat           <  1:599977/140‑1 (MQ=255)
                                                                                                                            ttCCGAGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAATATCCa        >  2:1002286/1‑140 (MQ=255)
                                                                                                                                 aGGAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAATATCCATtata   >  1:1529926/1‑140 (MQ=255)
                                                                                                                                  ggAAACTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAATATCCATTATag  <  2:1004165/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                      
TTGCCTGTGCCTGTTTCTTTCATCCCCGCAGTGATAATTCCCGAATCTACTTTGCCTTCACTCGAGACATTAAGTTCACCGTCGCCAGCATCACCGATATAGATATAGCGGAAAGCTTCGCCCGTTCCGAGGAAATTCCAATGCCCTTTATCGGTCACGTTGACGACACCGTGGGAACCGTCCTGAACGCCCACCAATGAATATTCTTTGTTATTAATCAGTCCATTATTGGAAATATTGACTGTGCCATTACCGAAATATCCATTATAG  >  NC_000913/1596939‑1597208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑