BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,772,250	C→T	H394Y (CAC→TAC)	ydiM →	putative exporter YdiM

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,772,250	0	C	T	100.0%	544.9 / NA	154	H394Y (CAC→TAC)	ydiM	putative exporter YdiM
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (63/91); total (63/91)

Only 100 of 154 total aligned reads displayed.

TTACTATTCCGTTGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATCACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAAAACAAACTATGACATGCAA  >  NC_000913/1772113‑1772384

ttACTATTCCGTTGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTAc                                                                                                                                      >  2:683428/1‑140 (MQ=255)

 tACTATTCCGTTGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACt                                                                                                                                     <  1:822366/140‑1 (MQ=255)

 tACTATTCCGTTGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACt                                                                                                                                     <  1:594300/140‑1 (MQ=255)

        ccGTTGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTaaa                                                                                                                              >  2:1601954/1‑140 (MQ=255)

        ccGTTGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTaaa                                                                                                                              >  2:1224130/1‑140 (MQ=255)

         cGTTGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAg                                                                                                                             <  2:1046533/140‑1 (MQ=255)

           ttGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGa                                                                                                                           >  2:195663/1‑140 (MQ=255)

           ttGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGa                                                                                                                           >  1:1264586/1‑140 (MQ=255)

           ttGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGa                                                                                                                           <  1:247719/140‑1 (MQ=255)

           ttGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGa                                                                                                                           >  2:60669/1‑140 (MQ=255)

           ttGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGa                                                                                                                           <  1:1202644/140‑1 (MQ=255)

           ttGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGa                                                                                                                           >  2:1158916/1‑140 (MQ=255)

           ttGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGa                                                                                                                           >  1:1050575/1‑140 (MQ=255)

                tACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATg                                                                                                                      >  1:1131101/1‑140 (MQ=255)

                tACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATg                                                                                                                      >  2:1436428/1‑140 (MQ=255)

                tACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATg                                                                                                                      <  2:288708/140‑1 (MQ=255)

                  cGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTc                                                                                                                    >  2:1108548/1‑140 (MQ=255)

                  cGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTc                                                                                                                    >  2:950834/1‑140 (MQ=255)

                    gCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGc                                                                                                                  <  1:1100103/140‑1 (MQ=255)

                    gCTCATCTGTCCAAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGc                                                                                                                  <  2:185921/140‑1 (MQ=255)

                     cTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCt                                                                                                                 <  2:1131101/140‑1 (MQ=255)

                        aTCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTATGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCg                                                                                                              >  2:929432/1‑140 (MQ=255)

                        aTCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGc                                                                                                                  >  1:328637/1‑136 (MQ=255)

                        aTCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGc                                                                                                                  <  2:328637/136‑1 (MQ=255)

                          cTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCggg                                                                                                            <  1:195663/140‑1 (MQ=255)

                           tGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCgggt                                                                                                           <  2:854979/140‑1 (MQ=255)

                              cccAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCgggtggg                                                                                                        <  1:1224130/140‑1 (MQ=255)

                                cAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTa                                                                                                      <  2:1264586/140‑1 (MQ=255)

                                  aagaagTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCgggtggg                                                                                                        <  1:834407/136‑1 (MQ=255)

                                  aagaagTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAAt                                                                                                    >  1:1469645/1‑140 (MQ=255)

                                  aagaagTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAAt                                                                                                    >  2:1564430/1‑140 (MQ=255)

                                  aagaagTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAAt                                                                                                    >  2:129720/1‑140 (MQ=255)

                                    gaagTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGc                                                                                                  <  2:1469645/140‑1 (MQ=255)

                                     aagTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCa                                                                                                 <  2:1338008/140‑1 (MQ=255)

                                       gTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAat                                                                                               >  1:1372300/1‑140 (MQ=255)

                                       gTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGC‑AAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTa                                                                                                      >  1:549680/1‑132 (MQ=255)

                                               gATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCtttt                                                                                       <  1:1108548/140‑1 (MQ=255)

                                               gATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCtttt                                                                                       <  2:1235644/140‑1 (MQ=255)

                                                   ttatGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAgg                                                                                   <  1:1415536/140‑1 (MQ=255)

                                                   ttatGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAgg                                                                                   <  2:1372300/140‑1 (MQ=255)

                                                   ttatGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAgg                                                                                   <  2:657844/140‑1 (MQ=255)

                                                    tatGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGt                                                                                  <  1:1307463/140‑1 (MQ=255)

                                                     atGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTc                                                                                 <  1:1601954/140‑1 (MQ=255)

                                                       gtgGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGTGTGGGTAATGCAATATTCTTTTCAGGTGAt                                                                               >  2:1038296/1‑140 (MQ=255)

                                                       gtgGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCAt                                                                               <  1:1334331/140‑1 (MQ=255)

                                                          gTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCa                                                                            <  1:139742/140‑1 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGGCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCaa                                                                           >  2:1174587/1‑140 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAatat                                                                                             <  2:1550349/122‑1 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAatat                                                                                             >  1:1550349/1‑122 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAatat                                                                                             <  2:1109190/122‑1 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGt                                                                                  <  1:1624822/133‑1 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGt                                                                                  >  2:1624822/1‑133 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCaa                                                                           >  1:1018849/1‑140 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCaa                                                                           >  2:1312431/1‑140 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCaa                                                                           >  2:1537388/1‑140 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCaa                                                                           >  1:480482/1‑140 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCaa                                                                           <  1:1370832/140‑1 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCaa                                                                           >  1:1311503/1‑140 (MQ=255)

                                                           ttCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCaa                                                                           >  1:480481/1‑140 (MQ=255)

                                                             cGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGa                                                                         >  1:1163449/1‑140 (MQ=255)

                                                             cGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGa                                                                         >  2:1329943/1‑140 (MQ=255)

                                                                tACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCt                                                                      >  1:1204688/1‑140 (MQ=255)

                                                                tACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCt                                                                      <  2:1311503/140‑1 (MQ=255)

                                                                tACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCt                                                                      <  2:1163449/140‑1 (MQ=255)

                                                                  ccGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTa                                                                    <  1:60669/140‑1 (MQ=255)

                                                                  ccGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTa                                                                    <  1:420712/140‑1 (MQ=255)

                                                                   cGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAgg                                                                                   >  2:1254381/1‑124 (MQ=255)

                                                                   cGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAgg                                                                                   <  1:1254381/124‑1 (MQ=255)

                                                                     ccATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACgg                                                                 <  2:480482/140‑1 (MQ=255)

                                                                     ccATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACgg                                                                 <  2:480481/140‑1 (MQ=255)

                                                                             gCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGataaataa                                                         >  1:803115/1‑140 (MQ=255)

                                                                                   ggTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCttt                                                   <  2:857646/140‑1 (MQ=255)

                                                                                   ggTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCttt                                                   <  2:1204688/140‑1 (MQ=255)

                                                                                       ttttACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTgc                                               <  1:1008000/140‑1 (MQ=255)

                                                                                       ttttACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTgc                                               <  1:214240/140‑1 (MQ=255)

                                                                                       ttttACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTgc                                               <  2:803115/140‑1 (MQ=255)

                                                                                        tttACTGGCACTGTTTATCGGCTTATGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTgcg                                              <  1:1256718/140‑1 (MQ=255)

                                                                                        tttACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTgcg                                              <  1:1618148/140‑1 (MQ=255)

                                                                                        tttACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTgcg                                              <  1:683428/140‑1 (MQ=255)

                                                                                          tACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGct                                            <  1:1038296/140‑1 (MQ=255)

                                                                                               gCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTc                                                  >  1:1449571/1‑129 (MQ=255)

                                                                                               gCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTc                                                  <  2:1449571/129‑1 (MQ=255)

                                                                                                             cTTACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGAt                         >  1:145835/1‑140 (MQ=255)

                                                                                                              ttACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATc                        <  1:1676697/140‑1 (MQ=255)

                                                                                                               tACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATc                        <  1:794645/139‑1 (MQ=255)

                                                                                                               tACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATc                        >  2:794645/1‑139 (MQ=255)

                                                                                                               tACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCa                       >  2:590954/1‑140 (MQ=255)

                                                                                                               tACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCa                       >  1:1142675/1‑140 (MQ=255)

                                                                                                               tACGCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCa                       >  1:365257/1‑140 (MQ=255)

                                                                                                                  gCAGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCaaaa                    <  1:942667/140‑1 (MQ=255)

                                                                                                                    aGCCGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAaaac                  <  1:1564430/140‑1 (MQ=255)

                                                                                                                      ccGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAaaacaa                >  1:269817/1‑140 (MQ=255)

                                                                                                                       cGCAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAaaacaaa               <  1:1160673/140‑1 (MQ=255)

                                                                                                                         cAAAAAAACGCGGCATTACTCGCTAAAGGAAAATGTCGCT‑CGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAAAACAAACTa            <  1:99746/140‑1 (MQ=255)

                                                                                                                           aaaaaaCGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAAAACAAACTAt           <  2:1659317/140‑1 (MQ=255)

                                                                                                                            aaaaaCGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAAAACAAACTATg          <  2:498244/140‑1 (MQ=255)

                                                                                                                             aaaaCGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAAAACAAACTATGa         <  2:930976/140‑1 (MQ=255)

                                                                                                                              aaaCGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAAAACAAACTATGAc        <  2:1191262/140‑1 (MQ=255)

                                                                                                                              aaaCGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTAATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAAAACAAACTATGAc        <  1:489073/140‑1 (MQ=255)

                                                                                                                               aaCGCGGCATTACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAAAACAAACTATGACa       <  2:1377943/140‑1 (MQ=255)

TTACTATTCCGTTGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATCACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAATGCAATATTCTTTTCAGGTCATGCAAGATCTTACGGATAAATAACTCTTTCTGCGCTAACTAAGGAAAATCGCGATCAAAAACAAACTATGACATGCAA  >  NC_000913/1772113‑1772384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`