Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 121,360 A→G R64R (CGT→CGC aroP ← aromatic amino acid:H(+) symporter AroP

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913121,3600AG100.0% 360.4 / NA 98R64R (CGT→CGCaroParomatic amino acid:H(+) symporter AroP
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (51/47);  total (51/47)

CAGCCATGGCAACTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATA  >  NC_000913/121224‑121495
                                                                                                                                        |                                                                                                                                       
cagcCATGGCAACTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGgcgc                                                                                                                                      <  1:452041/140‑1 (MQ=255)
cagcCATGGCAACTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGgcgc                                                                                                                                      <  2:1594618/140‑1 (MQ=255)
 agcCATGGCAACTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCa                                                                                                                                     <  1:70925/140‑1 (MQ=255)
 agcCATGGCAACTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCa                                                                                                                                     >  2:70925/1‑140 (MQ=255)
  gcCATGGCAACTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCAt                                                                                                                                    <  2:1424771/140‑1 (MQ=255)
   ccATGGCAACTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATg                                                                                                                                   >  1:1065204/1‑140 (MQ=255)
        gCAACTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAg                                                                                                                              >  2:877588/1‑140 (MQ=255)
          aaCTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGaa                                                                                                                            <  2:158133/140‑1 (MQ=255)
           aCTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGaaa                                                                                                                           >  1:152990/1‑140 (MQ=255)
           aCTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGaaa                                                                                                                           >  1:767216/1‑140 (MQ=255)
            cTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAg                                                                                                                          >  2:1530748/1‑140 (MQ=255)
             tAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGTAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAgg                                                                                                                         >  2:1501251/1‑140 (MQ=255)
             tAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAgg                                                                                                                         >  1:240412/1‑140 (MQ=255)
                      cAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAAc                                                                                                                >  2:1036649/1‑140 (MQ=255)
                        gTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCa                                                                                                              >  2:1432901/1‑140 (MQ=255)
                         tACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAg                                                                                                             >  2:1257408/1‑140 (MQ=255)
                           cccAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCa                                                                                                           >  1:571769/1‑140 (MQ=255)
                           cccAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCa                                                                                                           >  2:782912/1‑140 (MQ=255)
                            ccAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCaa                                                                                                          >  2:373503/1‑140 (MQ=255)
                             cAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAAt                                                                                                         >  1:1180833/1‑140 (MQ=255)
                              agtagtTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATg                                                                                                        >  1:1247470/1‑140 (MQ=255)
                              agtagtTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATg                                                                                                        >  1:262514/1‑140 (MQ=255)
                              agtagtTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATg                                                                                                        >  1:1591008/1‑140 (MQ=255)
                                tagtTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGc                                                                                                      <  1:373503/140‑1 (MQ=255)
                                 agtTCCAGCCAGAGGCGGAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCg                                                                                                     <  1:1684785/140‑1 (MQ=255)
                                 agtTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCg                                                                                                     <  2:101428/140‑1 (MQ=255)
                                 agtTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCg                                                                                                     <  2:1591008/140‑1 (MQ=255)
                                   ttCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGGGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTa                                                                                                   >  1:156229/1‑140 (MQ=255)
                                   ttCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCg                                                                                                     <  1:1425358/138‑1 (MQ=255)
                                   ttCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCg                                                                                                     >  1:1383560/1‑138 (MQ=255)
                                   ttCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCg                                                                                                     <  2:1383560/138‑1 (MQ=255)
                                   ttCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCg                                                                                                     >  2:1425358/1‑138 (MQ=255)
                                   ttCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTa                                                                                                   >  2:879752/1‑140 (MQ=255)
                                   ttCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTa                                                                                                   >  2:274357/1‑140 (MQ=255)
                                   ttCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTa                                                                                                   >  2:1425592/1‑140 (MQ=255)
                                     ccagccagAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAAc                                                                                                 <  1:1212189/140‑1 (MQ=255)
                                      cagccagAGGCGAAACCGGCAAAACTGCCGCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAAcc                                                                                                <  1:273316/140‑1 (MQ=255)
                                      cagccagAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAAcc                                                                                                <  2:240412/140‑1 (MQ=255)
                                        gccagAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCa                                                                                              >  1:1111429/1‑140 (MQ=255)
                                            gagGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGAt                                                                                          <  1:1530748/140‑1 (MQ=255)
                                                   aaCCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCt                                                                                   >  2:219371/1‑140 (MQ=255)
                                                    aCCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGGGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTg                                                                                  <  2:156229/140‑1 (MQ=255)
                                                       ggCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGcc                                                                               <  2:1229400/140‑1 (MQ=255)
                                                         cAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCt                                                                             <  1:1158145/140‑1 (MQ=255)
                                                         cAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCt                                                                             <  2:755389/140‑1 (MQ=255)
                                                            aaCTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCg                                                                          <  1:737302/140‑1 (MQ=255)
                                                            aaCTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCg                                                                          <  2:780148/140‑1 (MQ=255)
                                                            aaCTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCg                                                                          <  1:1240956/140‑1 (MQ=255)
                                                             aCTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCgg                                                                         <  1:1425592/140‑1 (MQ=255)
                                                             aCTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCgg                                                                         <  1:879752/140‑1 (MQ=255)
                                                              cTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGa                                                                        <  1:782912/140‑1 (MQ=255)
                                                              cTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGa                                                                        <  2:522533/140‑1 (MQ=255)
                                                              cTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGa                                                                        <  1:877588/140‑1 (MQ=255)
                                                              cTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGa                                                                        <  1:219371/140‑1 (MQ=255)
                                                              cTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGa                                                                        <  1:1432901/140‑1 (MQ=255)
                                                              cTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGa                                                                        <  2:262514/140‑1 (MQ=255)
                                                              cTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGa                                                                        <  2:1247470/140‑1 (MQ=255)
                                                                              aaGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGgcg                                                        >  1:383031/1‑140 (MQ=255)
                                                                               aGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGgcgc                                                       <  2:1133149/140‑1 (MQ=255)
                                                                                gCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCt                                                      >  1:1346473/1‑140 (MQ=255)
                                                                                 cAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTa                                                     >  2:21503/1‑140 (MQ=255)
                                                                                 cAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTa                                                     >  2:109156/1‑140 (MQ=255)
                                                                                   aaGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTAcc                                                   <  2:1287291/140‑1 (MQ=255)
                                                                                    aGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCCCCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTAcc                                                   <  1:79140/139‑1 (MQ=255)
                                                                                    aGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTAccc                                                  >  2:327915/1‑140 (MQ=255)
                                                                                    aGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTAcc                                                   >  2:79140/1‑139 (MQ=255)
                                                                                      tGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAg                                                >  1:1642871/1‑140 (MQ=255)
                                                                                           aaaGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGgcg                                                        <  2:194256/127‑1 (MQ=255)
                                                                                           aaaGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGgcg                                                        >  1:194256/1‑127 (MQ=255)
                                                                                             aGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAAc                                         <  2:1187319/140‑1 (MQ=255)
                                                                                                aGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAAc                                         <  2:279234/137‑1 (MQ=255)
                                                                                                aGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAAc                                         >  1:279234/1‑137 (MQ=255)
                                                                                                  ccTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGt                                    >  2:959972/1‑140 (MQ=255)
                                                                                                  ccTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGt                                    >  1:974106/1‑140 (MQ=255)
                                                                                                  ccTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGt                                    >  1:1123465/1‑140 (MQ=255)
                                                                                                  ccTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGt                                    <  1:1501251/140‑1 (MQ=255)
                                                                                                  ccTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGt                                    >  2:1427501/1‑140 (MQ=255)
                                                                                                  ccTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGt                                    >  1:1552725/1‑140 (MQ=255)
                                                                                                  ccTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGt                                    >  1:338610/1‑140 (MQ=255)
                                                                                                   cTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTc                                   >  1:1356748/1‑140 (MQ=255)
                                                                                                   cTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTc                                   >  1:84318/1‑140 (MQ=255)
                                                                                                       gACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTa                               <  2:1346473/140‑1 (MQ=255)
                                                                                                       gACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTa                               <  2:338610/140‑1 (MQ=255)
                                                                                                       gACAGGTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTa                               <  1:327915/140‑1 (MQ=255)
                                                                                                            gTTCTTCGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATcgcg                          <  1:642182/140‑1 (MQ=255)
                                                                                                             ttcttcGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGTATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTa                               <  2:990500/134‑1 (MQ=255)
                                                                                                             ttcttcGACCACCATTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGTATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTa                               >  1:990500/1‑134 (MQ=255)
                                                                                                                      caccaTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGTGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAgcg                >  2:1434872/1‑140 (MQ=255)
                                                                                                                      caccaTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAgcg                >  2:1483159/1‑140 (MQ=255)
                                                                                                                        ccaTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGcgcg              >  1:505679/1‑140 (MQ=255)
                                                                                                                        ccaTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGcgcg              <  2:199441/140‑1 (MQ=255)
                                                                                                                        ccaTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGcgcg              <  1:1427501/140‑1 (MQ=255)
                                                                                                                        ccaTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGcgcg              <  2:1476561/140‑1 (MQ=255)
                                                                                                                        ccaTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGcgcg              <  1:1257408/140‑1 (MQ=255)
                                                                                                                        ccaTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGcgcg              <  2:152990/140‑1 (MQ=255)
                                                                                                                         caTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGa             >  1:1297774/1‑140 (MQ=255)
                                                                                                                         caTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGa             >  1:1246313/1‑140 (MQ=255)
                                                                                                                          aTTTCACCCAGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGAt            <  1:307313/140‑1 (MQ=255)
                                                                                                                                   aGCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAat   >  2:1174690/1‑140 (MQ=255)
                                                                                                                                    gCTGGCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAata  >  1:23681/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                       
CAGCCATGGCAACTAAAACGTACAGTACCCAGTAGTTCCAGCCAGAGGCGAAACCGGCAAAACTGCCCCAGTATTTATAAGCAAAGTGGCTAAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATA  >  NC_000913/121224‑121495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: