BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,814,020	A→G	T469A (ACC→GCC)	emrB →	multidrug efflux pump membrane subunit EmrB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,814,020	0	A	G	100.0%	389.9 / NA	106	T469A (ACC→GCC)	emrB	multidrug efflux pump membrane subunit EmrB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (53/53); total (53/53)

Only 100 of 109 total aligned reads displayed.

GCGAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCACCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCACTAAGT  >  NC_000913/2813886‑2814156

gcgAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAAt                                                                                                                                     >  1:1181803/1‑140 (MQ=255)

 cgAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATc                                                                                                                                    <  1:275751/140‑1 (MQ=255)

 cgAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATc                                                                                                                                    <  1:66565/140‑1 (MQ=255)

         tGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTg                                                                                                                            >  2:1256568/1‑140 (MQ=255)

              cATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGattat                                                                                                                       <  2:922232/140‑1 (MQ=255)

              cATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGattat                                                                                                                       <  1:1495793/140‑1 (MQ=255)

               aTGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGattatt                                                                                                                      >  1:801978/1‑140 (MQ=255)

                tGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTAttt                                                                                                                     >  1:1008103/1‑140 (MQ=255)

                tGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTAttt                                                                                                                     <  1:25312/140‑1 (MQ=255)

                tGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTAttt                                                                                                                     >  1:1231473/1‑140 (MQ=255)

                tGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTAttt                                                                                                                     >  2:222249/1‑140 (MQ=255)

                  cgcAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTcc                                                                                                                   <  2:111992/140‑1 (MQ=255)

                       ttGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCaa                                                                                                              >  1:464636/1‑140 (MQ=255)

                        tGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAAt                                                                                                             <  2:1423112/140‑1 (MQ=255)

                        tGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAAt                                                                                                             >  2:795780/1‑140 (MQ=255)

                          aCTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATga                                                                                                           <  1:38740/140‑1 (MQ=255)

                          aCTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATga                                                                                                           >  1:1638096/1‑140 (MQ=255)

                           cTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATgag                                                                                                          <  1:222249/140‑1 (MQ=255)

                            tGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATgaga                                                                                                         >  2:1364114/1‑140 (MQ=255)

                              aGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTCGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGAtc                                                                                                       <  2:1486659/140‑1 (MQ=255)

                                tCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGGTTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGAtctt                                                                                                     >  2:962466/1‑140 (MQ=255)

                                 cGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGAtcttc                                                                                                    >  2:882657/1‑140 (MQ=255)

                                    tAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTgg                                                                                                 >  2:808192/1‑140 (MQ=255)

                                      aaCCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGAt                                                                                               <  2:923747/140‑1 (MQ=255)

                                       aCCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATg                                                                                              <  1:983231/140‑1 (MQ=255)

                                       aCCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATg                                                                                              <  2:44395/140‑1 (MQ=255)

                                        cccGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGGTTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGt                                                                                             <  1:962466/140‑1 (MQ=255)

                                        cccGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGt                                                                                             <  2:801978/140‑1 (MQ=255)

                                           gTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAg                                                                                          <  2:1231473/140‑1 (MQ=255)

                                           gTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAg                                                                                          >  1:553837/1‑140 (MQ=255)

                                            ttCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAg                                                                                          <  2:454672/139‑1 (MQ=255)

                                            ttCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAg                                                                                          <  2:188618/139‑1 (MQ=255)

                                            ttCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAg                                                                                          >  1:454672/1‑139 (MQ=255)

                                            ttCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGc                                                                                         >  1:1593889/1‑140 (MQ=255)

                                            ttCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGc                                                                                         >  1:604312/1‑140 (MQ=255)

                                            ttCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGc                                                                                         <  1:1526577/140‑1 (MQ=255)

                                             tCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGcc                                                                                        <  1:180443/140‑1 (MQ=255)

                                                  ccGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGat                                                                                   <  2:1187308/140‑1 (MQ=255)

                                                          ccAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCg                                                                           >  1:1362467/1‑140 (MQ=255)

                                                          ccAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCg                                                                           <  1:351884/140‑1 (MQ=255)

                                                           cAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGt                                                                          >  2:1624161/1‑140 (MQ=255)

                                                           cAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGt                                                                          <  2:1362467/140‑1 (MQ=255)

                                                           cAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGt                                                                          >  2:461282/1‑140 (MQ=255)

                                                            aGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTc                                                                         <  2:1488537/140‑1 (MQ=255)

                                                             ggCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTcc                                                                        >  2:259482/1‑140 (MQ=255)

                                                                gATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCctgc                                                                     <  2:1593889/140‑1 (MQ=255)

                                                                gATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCctgc                                                                     <  2:1638096/140‑1 (MQ=255)

                                                                gATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCctgc                                                                     <  1:258886/140‑1 (MQ=255)

                                                                 aTGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCctgct                                                                    <  2:1181803/140‑1 (MQ=255)

                                                                        gTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTggg                                                                 >  1:1007845/1‑136 (MQ=255)

                                                                        gTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTggg                                                                 <  2:1007845/136‑1 (MQ=255)

                                                                         tCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTc                                                                         >  1:402159/1‑127 (MQ=255)

                                                                         tCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTc                                                                         <  2:402159/127‑1 (MQ=255)

                                                                           aaCTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGgtg                                                          >  2:867428/1‑140 (MQ=255)

                                                                           aaCTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGgtg                                                          <  1:461282/140‑1 (MQ=255)

                                                                            aCTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGgtgt                                                         >  1:992232/1‑140 (MQ=255)

                                                                            aCTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGgtgt                                                         >  2:278745/1‑140 (MQ=255)

                                                                            aCTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGgtgt                                                         >  2:337748/1‑140 (MQ=255)

                                                                            aCTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGgtgt                                                         >  1:1523077/1‑140 (MQ=255)

                                                                            aCTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATT‑CTCGTCCTGCTGGGGCTGGtgtg                                                        >  1:522739/1‑140 (MQ=255)

                                                                             cTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGtgtg                                                        <  1:1256568/140‑1 (MQ=255)

                                                                             cTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGtgtg                                                        <  2:403301/140‑1 (MQ=255)

                                                                             cTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATT‑CTCGTCCTGCTGGGGCTGGTGTgg                                                       <  2:522739/140‑1 (MQ=255)

                                                                              tGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTgg                                                       >  1:1473806/1‑140 (MQ=255)

                                                                               ggAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGt                                                      <  1:259482/140‑1 (MQ=255)

                                                                                 aaGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGttt                                                    >  1:10019/1‑140 (MQ=255)

                                                                                   gggCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGc                                                  >  2:1381913/1‑140 (MQ=255)

                                                                                     gCTTGGGATGACCCAACAGCAGGCATCGGGCTGGATTGCCCAGCAGATCCCCAATCAGGGGCTGTTTTTTTCCGCCAATGAGATTTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGTTGGTGTGGTTTGCTa                                                <  2:10019/140‑1 (MQ=255)

                                                                                       ttGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTaaa                                              >  1:964124/1‑140 (MQ=255)

                                                                                          ggATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCg                                           >  2:186190/1‑140 (MQ=255)

                                                                                              gACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCAt                                       <  1:278745/140‑1 (MQ=255)

                                                                                               aCGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCAtt                                      <  1:35085/140‑1 (MQ=255)

                                                                                               aCGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCAtt                                      >  2:1508986/1‑140 (MQ=255)

                                                                                               aCGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCAtt                                      >  2:35085/1‑140 (MQ=255)

                                                                                               aCGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCAtt                                      >  1:702648/1‑140 (MQ=255)

                                                                                               aCGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCAtt                                      >  2:767778/1‑140 (MQ=255)

                                                                                               aCGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCAtt                                      >  1:437191/1‑140 (MQ=255)

                                                                                                cGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCAttt                                     >  1:194788/1‑140 (MQ=255)

                                                                                                    aCAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGgcg                                 >  1:910712/1‑140 (MQ=255)

                                                                                                    aCAGCAGGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGgcg                                 <  2:1473806/140‑1 (MQ=255)

                                                                                                         agGCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGt                            >  1:1015370/1‑140 (MQ=255)

                                                                                                          ggCATCAGACTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTg                           >  2:1667917/1‑140 (MQ=255)

                                                                                                           gCATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTgg                          >  1:444205/1‑140 (MQ=255)

                                                                                                            cATCAGGCTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTggc                         <  1:1679848/140‑1 (MQ=255)

                                                                                                                   cTGGATTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAg                  <  1:186190/140‑1 (MQ=255)

                                                                                                                       aTTGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCgg              >  1:1597427/1‑140 (MQ=255)

                                                                                                                        ttGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGt             <  1:1381913/140‑1 (MQ=255)

                                                                                                                        ttGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGt             >  1:1377362/1‑140 (MQ=255)

                                                                                                                         tGCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTg            <  1:1508986/140‑1 (MQ=255)

                                                                                                                          gCCCAGCAGATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTgc           <  2:1015370/140‑1 (MQ=255)

                                                                                                                             cagcagATCGCCAATCAGGGGCTGATTTTTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCa        <  2:831655/140‑1 (MQ=255)

                                                                                                                             cagcagATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCa        <  2:1377362/140‑1 (MQ=255)

                                                                                                                             cagcagATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCa        <  1:808192/140‑1 (MQ=255)

                                                                                                                              agcagATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCAc       <  1:1364114/140‑1 (MQ=255)

                                                                                                                              agcagATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCAc       <  1:1624161/140‑1 (MQ=255)

                                                                                                                               gcagATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCACt      <  1:795780/140‑1 (MQ=255)

                                                                                                                               gcagATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCACt      <  1:882657/140‑1 (MQ=255)

                                                                                                                                cagATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCACTa     >  1:537393/1‑140 (MQ=255)

                                                                                                                                  gATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCACTAAg   <  2:553837/140‑1 (MQ=255)

                                                                                                                                  gATCGCCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCACTAAg   <  2:910712/140‑1 (MQ=255)

GCGAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCACCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCACTAAGT  >  NC_000913/2813886‑2814156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`