BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,266,649	T→C	L139L (TTA→TTG)	tdcA ←	DNA‑binding transcriptional activator TdcA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,266,649	0	T	C	100.0%	393.7 / NA	107	L139L (TTA→TTG)	tdcA	DNA‑binding transcriptional activator TdcA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (48/59); total (48/59)

Only 100 of 108 total aligned reads displayed.

GGTGCATGTTCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGTAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAGGAAAACCAAATGAGACTTCCACCACCGCC  >  NC_000913/3266514‑3266784

ggTGCATGTTCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGa                                                                                                                                     >  2:873533/1‑140 (MQ=255)

ggTGCATGTTCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGa                                                                                                                                     <  1:1205257/140‑1 (MQ=255)

 gttcATGTTCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGaa                                                                                                                                    >  1:1295562/4‑140 (MQ=255)

  tGCATGTTCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAAc                                                                                                                                   >  2:1426664/1‑140 (MQ=255)

   gCATGTTCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACg                                                                                                                                  >  2:380577/1‑140 (MQ=255)

     aTGTTCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGaa                                                                                                                                >  2:66548/1‑140 (MQ=255)

     aTGTTCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGaa                                                                                                                                <  1:949496/140‑1 (MQ=255)

       gTTCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGa                                                                                                                              <  2:535531/140‑1 (MQ=255)

        ttCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGAc                                                                                                                             >  1:989587/1‑140 (MQ=255)

          cGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAg                                                                                                                           <  2:910953/140‑1 (MQ=255)

            ggACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGtt                                                                                                                         <  1:1117405/140‑1 (MQ=255)

            ggACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGtt                                                                                                                         <  2:1332313/140‑1 (MQ=255)

              aCTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTgc                                                                                                                       <  2:1092283/140‑1 (MQ=255)

              aCTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTgc                                                                                                                       <  2:1455341/140‑1 (MQ=255)

              aCTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTgc                                                                                                                       >  1:934515/1‑140 (MQ=255)

                ttACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTgcgc                                                                                                                     <  2:1616957/140‑1 (MQ=255)

                ttACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTgcgc                                                                                                                     <  1:66548/140‑1 (MQ=255)

                ttACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTgcgc                                                                                                                     <  2:773336/140‑1 (MQ=255)

                 tACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCt                                                                                                                    <  1:978941/140‑1 (MQ=255)

                 tACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCt                                                                                                                    <  1:429700/140‑1 (MQ=255)

                  aCTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCtt                                                                                                                   >  1:960136/1‑140 (MQ=255)

                  aCTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCtt                                                                                                                   >  2:1152234/1‑140 (MQ=255)

                  aCTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCtt                                                                                                                   >  1:796886/1‑140 (MQ=255)

                  aCTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCtt                                                                                                                   <  2:1107435/140‑1 (MQ=255)

                   cTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTc                                                                                                                  >  1:365802/1‑140 (MQ=255)

                     ggCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTcat                                                                                                                <  2:1259875/140‑1 (MQ=255)

                     ggCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTcat                                                                                                                <  1:1309871/140‑1 (MQ=255)

                     ggCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTcat                                                                                                                <  2:796886/140‑1 (MQ=255)

                     ggCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTcat                                                                                                                <  2:1411388/140‑1 (MQ=255)

                       cTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCt                                                                                                                    <  2:426961/134‑1 (MQ=255)

                       cTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCt                                                                                                                    >  1:426961/1‑134 (MQ=255)

                       cTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTcatac                                                                                                              >  2:1357574/1‑140 (MQ=255)

                       cTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTcatac                                                                                                              >  1:260474/1‑140 (MQ=255)

                         aCCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTcatacat                                                                                                            >  2:1436240/1‑140 (MQ=255)

                          ccAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCGCTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTcatacata                                                                                                           <  1:349091/140‑1 (MQ=255)

                          ccAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTcatacata                                                                                                           <  2:464504/140‑1 (MQ=255)

                           cAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAg                                                                                                          >  2:1437900/1‑140 (MQ=255)

                            aGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGa                                                                                                         >  1:1328584/1‑140 (MQ=255)

                                caAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAAcc                                                                                                     >  1:1663839/1‑140 (MQ=255)

                                caAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAAcc                                                                                                     >  2:1379231/1‑140 (MQ=255)

                                  aaCTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTg                                                                                                   <  1:1426664/140‑1 (MQ=255)

                                   aCTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTgc                                                                                                  >  1:1386749/1‑140 (MQ=255)

                                    cTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTgcg                                                                                                 <  2:1610441/140‑1 (MQ=255)

                                    cTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTgcg                                                                                                 >  2:1611903/1‑140 (MQ=255)

                                            cGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCggg                                                                                         <  1:1357574/140‑1 (MQ=255)

                                            cGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCggg                                                                                         >  2:1215195/1‑140 (MQ=255)

                                             gAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGa                                                                                        <  2:365802/140‑1 (MQ=255)

                                                     gCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACctct                                                                                >  1:876927/1‑140 (MQ=255)

                                                     gCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACctct                                                                                >  2:432373/1‑140 (MQ=255)

                                                       tCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCttt                                                                              >  1:950188/1‑140 (MQ=255)

                                                        cAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTg                                                                             >  2:949711/1‑140 (MQ=255)

                                                        cAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTg                                                                             <  1:1131002/140‑1 (MQ=255)

                                                        cAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTg                                                                             <  1:1611903/140‑1 (MQ=255)

                                                        cAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTg                                                                             >  1:891261/1‑140 (MQ=255)

                                                         aaCATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGa                                                                            <  2:891261/140‑1 (MQ=255)

                                                         aaCATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGa                                                                            <  1:949711/140‑1 (MQ=255)

                                                         aaCATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGa                                                                            <  1:932973/140‑1 (MQ=255)

                                                           cATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAAc                                                                          <  1:380577/140‑1 (MQ=255)

                                                             tGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACtt                                                                        <  1:736993/140‑1 (MQ=255)

                                                              gTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACttg                                                                       <  2:121432/140‑1 (MQ=255)

                                                                aaaTCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCtt                                                                               <  2:768018/130‑1 (MQ=255)

                                                                aaaTCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCtt                                                                               >  1:768018/1‑130 (MQ=255)

                                                                aaaTCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACttgtt                                                                     >  2:1644375/1‑140 (MQ=255)

                                                                   tCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGat                                                                  >  2:592067/1‑140 (MQ=255)

                                                                   tCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGat                                                                  <  1:1379231/140‑1 (MQ=255)

                                                                   tCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGat                                                                  <  2:318956/140‑1 (MQ=255)

                                                                    ccTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGatc                                                                 <  1:1437900/140‑1 (MQ=255)

                                                                      tGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGat                                                                  >  2:400051/1‑137 (MQ=255)

                                                                        aaGCTTCATTTCTGCACTTAACGTACCAATCGCAGAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTg                                                                             <  2:661267/124‑1 (MQ=255)

                                                                        aaGCTTCATTTCTGCACTTAACGTACCAATCGCAGAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTg                                                                             >  1:661267/1‑124 (MQ=255)

                                                                         aGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATGATccc                                                            >  2:1501021/1‑140 (MQ=255)

                                                                         aGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATccc                                                            <  2:1363833/140‑1 (MQ=255)

                                                                         aGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATccc                                                            <  1:432373/140‑1 (MQ=255)

                                                                          gCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCt                                                           <  1:1486549/140‑1 (MQ=255)

                                                                              cATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACa                                                       >  1:764953/1‑140 (MQ=255)

                                                                               aTTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACAt                                                      <  2:260474/140‑1 (MQ=255)

                                                                               aTTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACAt                                                      <  2:1101368/140‑1 (MQ=255)

                                                                               aTTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACAt                                                      <  1:1299556/140‑1 (MQ=255)

                                                                               aTTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACAt                                                      <  2:387456/140‑1 (MQ=255)

                                                                                         ttAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTaaaa                                            >  1:199777/1‑140 (MQ=255)

                                                                                           aaCGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAAcc                                          >  2:906645/1‑140 (MQ=255)

                                                                                           aaCGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAAcc                                          >  1:403066/1‑140 (MQ=255)

                                                                                           aaCGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAAcc                                          >  2:1303876/1‑140 (MQ=255)

                                                                                           aaCGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAAcc                                          >  1:373670/1‑140 (MQ=255)

                                                                                              gTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACcaat                                       <  2:199777/140‑1 (MQ=255)

                                                                                                aCCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACcaatca                                     >  2:914907/1‑140 (MQ=255)

                                                                                                   aaTCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAAAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATg                                  >  2:1540100/1‑140 (MQ=255)

                                                                                                     tCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGaa                                >  2:612791/1‑140 (MQ=255)

                                                                                                     tCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGaa                                >  1:577941/1‑140 (MQ=255)

                                                                                                     tCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGaa                                >  1:109780/1‑140 (MQ=255)

                                                                                                       gCAAAATCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAgg                              <  1:286187/140‑1 (MQ=255)

                                                                                                         aaaaTCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAGGaa                            <  1:1215195/140‑1 (MQ=255)

                                                                                                            aTCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAGGAAAAc                         <  2:373670/140‑1 (MQ=255)

                                                                                                             tCCAGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAGGAAAAcc                        <  1:1152234/140‑1 (MQ=255)

                                                                                                                aGTCGACCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAgg                              <  1:601167/131‑1 (MQ=255)

                                                                                                                  tCGACCGTCACGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAGGAAAACCAAATg                   <  1:961300/140‑1 (MQ=255)

                                                                                                                     aCCGTCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAGGAAAACCAAATgaga                <  1:914907/140‑1 (MQ=255)

                                                                                                                         tCGCGGATTGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAGGAAAACCAAATGAGACTTc            <  2:577941/140‑1 (MQ=255)

                                                                                                                                 tGCCGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAGGAAAACCAAATGAGACTTCCACCACCg    >  1:687771/1‑140 (MQ=255)

                                                                                                                                   ccGGCAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAGGAAAACCAAATGAGACTTCCACCACCGcc  >  2:1165271/1‑140 (MQ=255)

GGTGCATGTTCGGGACTTACTGGCTACCAGCACAAACTCGGACTCGAACAGCGGCTCAACATGTAAATCCTGAAGCTTCATTTCTGCACTTAACGTACCAATCGCAAAATCCAGTCGACCGTCGCGGATTGCCGGTAAGAACGAAGACAGTTGCGCTTCATACATAGAAACCTGCGCTTTCGGGAACACCTCTTTGAACTTGTTGATCATCCCTGACATAAAAGTAAAACCAATCAATGAAGGAAAACCAAATGAGACTTCCACCACCGCC  >  NC_000913/3266514‑3266784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`