BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	469,571	(A)_8→7	coding (701/1773 nt)	mdlA →	ABC transporter family protein MdlA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	469,564	0	A	.	100.0%	730.5 / NA	172	coding (694/1773 nt)	mdlA	ABC transporter family protein MdlA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (87/85); total (87/85)

Only 100 of 183 total aligned reads displayed.

CTTTAAGCTGGCACAGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGCAAAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTAACGCTGGGCCA  >  NC_000913/469425‑469697

cTTTAAGCTGGCACAGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGCa                                                                                                                                       >  2:2397684/1‑140 (MQ=255)

          gCACAGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGCaaaaaaacatg                                                                                                                             >  1:595478/1‑136 (MQ=255)

          gCACAGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGCaa                                                                                                                                      <  2:1818552/131‑1 (MQ=255)

           cacaGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGc                                                                                                                           >  1:1352553/1‑140 (MQ=255)

           cacaGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGc                                                                                                                           >  2:2979487/1‑140 (MQ=255)

           cacaGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGc                                                                                                                           >  2:1250727/1‑140 (MQ=255)

           cacaGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGc                                                                                                                           >  2:1347141/1‑140 (MQ=255)

               ggcggcGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGt                                                                                                                       <  1:1435592/140‑1 (MQ=255)

               ggcggcGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGt                                                                                                                       >  2:478527/1‑140 (MQ=255)

                gcggcgTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGt                                                                                                                       <  1:2252629/139‑1 (MQ=255)

                gcggcgTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGt                                                                                                                       >  2:2252629/1‑139 (MQ=255)

                 cggcgTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTgg                                                                                                                     >  2:1578840/1‑140 (MQ=255)

                    cgTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGgcgc                                                                                                                  >  2:3352539/1‑140 (MQ=255)

                         tCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCgg                                                                                                                         <  2:824963/128‑1 (MQ=255)

                         tCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCgg                                                                                                                         >  1:824963/1‑128 (MQ=255)

                         tCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTAtt                                                                                                             <  2:3430762/140‑1 (MQ=255)

                             gTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATg                                                                                                         <  1:478527/140‑1 (MQ=255)

                                 tAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCg                                                                                                     >  1:1468875/1‑140 (MQ=255)

                                  aaTGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGc                                                                                                        <  2:1104073/136‑1 (MQ=255)

                                  aaTGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGt                                                                                                    >  2:2562211/1‑140 (MQ=255)

                                        cGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgac                                                                                              >  2:1730388/1‑140 (MQ=255)

                                        cGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgac                                                                                              <  1:2397684/140‑1 (MQ=255)

                                        cGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgac                                                                                              >  1:2395326/1‑140 (MQ=255)

                                        cGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgac                                                                                              >  2:2347668/1‑140 (MQ=255)

                                         gCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacc                                                                                             <  1:2347668/140‑1 (MQ=255)

                                         gCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacc                                                                                             <  1:417773/140‑1 (MQ=255)

                                         gCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacc                                                                                             <  1:3352539/140‑1 (MQ=255)

                                         gCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacc                                                                                             <  1:2857710/140‑1 (MQ=255)

                                          cACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacc                                                                                             >  2:2673039/1‑139 (MQ=255)

                                          cACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacc                                                                                             <  1:2673039/139‑1 (MQ=255)

                                           aCCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAGACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacccg                                                                                           <  2:100805/140‑1 (MQ=255)

                                           aCCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacccg                                                                                           <  2:1468875/140‑1 (MQ=255)

                                           aCCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacccg                                                                                           <  1:302376/140‑1 (MQ=255)

                                           aCCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacccg                                                                                           <  1:1571935/140‑1 (MQ=255)

                                           aCCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacccg                                                                                           <  1:2562211/140‑1 (MQ=255)

                                           aCCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcaacccg                                                                                           <  1:1795143/140‑1 (MQ=255)

                                             ccAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacccgac                                                                                         <  1:2827151/140‑1 (MQ=255)

                                             ccAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTcgacccgac                                                                                         <  1:1250727/140‑1 (MQ=255)

                                                ggAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCAt                                                                                      >  1:196110/1‑140 (MQ=255)

                                                ggAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCAt                                                                                      <  2:3001289/140‑1 (MQ=255)

                                                     gCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCtata                                                                                 >  2:2891088/1‑140 (MQ=255)

                                                      ccTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTatat                                                                                >  1:2523487/1‑140 (MQ=255)

                                                       cTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATc                                                                               <  2:1783376/140‑1 (MQ=255)

                                                       cTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTCTCGACCCGACCAt                                                                                      >  1:1822166/1‑133 (MQ=255)

                                                       cTCACCAGTATCCGCATGATCAAAGCCTTTAGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATc                                                                               >  2:1666490/1‑140 (MQ=255)

                                                         cACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATcgc                                                                             >  2:850635/1‑140 (MQ=255)

                                                          aCCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATcgcg                                                                            >  1:2424770/1‑140 (MQ=255)

                                                           ccAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCTCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGa                                                                           >  2:1983365/1‑140 (MQ=255)

                                                            cAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGAt                                                                          <  1:2891088/140‑1 (MQ=255)

                                                               tATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTgg                                                                       >  1:1166479/1‑140 (MQ=255)

                                                                  ccGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTAt                                                                    <  1:1730388/140‑1 (MQ=255)

                                                                    gCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATgg                                                                  >  2:2765026/1‑140 (MQ=255)

                                                                      aTGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGAt                                                                          >  1:2726810/1‑130 (MQ=255)

                                                                      aTGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCg                                                                >  2:2300081/1‑140 (MQ=255)

                                                                      aTGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCg                                                                >  2:2155892/1‑140 (MQ=255)

                                                                         aTCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACAATCTATATCGCGATTGGTATGGCGAAc                                                             >  1:3394610/1‑140 (MQ=255)

                                                                               gCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTg                                                       >  1:918577/1‑140 (MQ=255)

                                                                                    tGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGAt                                                  >  2:392339/1‑140 (MQ=255)

                                                                                    tGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGAt                                                  >  1:1298378/1‑140 (MQ=255)

                                                                                    tGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGAt                                                  >  2:141097/1‑140 (MQ=255)

                                                                                       tCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTgg                                               <  2:2424770/140‑1 (MQ=255)

                                                                                       tCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTgg                                               <  2:918577/140‑1 (MQ=255)

                                                                                          ggAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTggcgg                                            <  2:667731/140‑1 (MQ=255)

                                                                                          ggAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTggcgg                                            >  1:3294006/1‑140 (MQ=255)

                                                                                          ggAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTggcgg                                            <  1:37132/140‑1 (MQ=255)

                                                                                          ggAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTgg                                               <  2:3017559/137‑1 (MQ=255)

                                                                                           gAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTggcggc                                           <  2:2835752/140‑1 (MQ=255)

                                                                                           gAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACAATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTggcggc                                           <  2:3394610/140‑1 (MQ=255)

                                                                                                tCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGGGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAg                                      >  1:617906/1‑140 (MQ=255)

                                                                                                tCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAg                                      <  2:595478/140‑1 (MQ=255)

                                                                                                 cGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGGCCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTggcg                                             >  2:3206280/1‑132 (MQ=255)

                                                                                                 cGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGGCCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTggcg                                             <  1:3206280/132‑1 (MQ=255)

                                                                                                 cGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGcggcgg                                         <  2:1517740/136‑1 (MQ=255)

                                                                                                 cGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGt                                     >  1:2098134/1‑140 (MQ=255)

                                                                                                   ccAGTCGGCGTTATTTGTCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTg                                   <  1:2284312/140‑1 (MQ=255)

                                                                                                   ccAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCTCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTg                                   <  1:1983365/140‑1 (MQ=255)

                                                                                                     aGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGa                                 <  1:850635/140‑1 (MQ=255)

                                                                                                     aGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGa                                 <  1:1519444/140‑1 (MQ=255)

                                                                                                      gTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTg                                   <  1:1484429/137‑1 (MQ=255)

                                                                                                       tCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGAtg                               >  2:35882/1‑140 (MQ=255)

                                                                                                        cGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGAtgg                              <  2:2237488/140‑1 (MQ=255)

                                                                                                        cGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGAtgg                              <  2:2523487/140‑1 (MQ=255)

                                                                                                        cGGCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGAtgg                              <  2:511892/140‑1 (MQ=255)

                                                                                                          gCGTTATTTGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGAtggtg                            <  1:141097/140‑1 (MQ=255)

                                                                                                                 ttGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAgg                     >  1:1028695/1‑140 (MQ=255)

                                                                                                                  tGCCGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAggg                    <  1:2318388/140‑1 (MQ=255)

                                                                                                                    ccGCGGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCa                  >  1:2651812/1‑140 (MQ=255)

                                                                                                                     cgcgGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAggg                    <  1:3001632/137‑1 (MQ=255)

                                                                                                                     cgcgGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAg                 >  1:3065883/1‑140 (MQ=255)

                                                                                                                     cgcgGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAg                 >  1:2136524/1‑140 (MQ=255)

                                                                                                                       cgGATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGtt               >  1:191089/1‑140 (MQ=255)

                                                                                                                        ggATGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGttt              <  2:2795349/140‑1 (MQ=255)

                                                                                                                          aTGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTaa            >  1:1030030/1‑140 (MQ=255)

                                                                                                                           tGCCGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTAAc           <  2:3294006/140‑1 (MQ=255)

                                                                                                                             ccGAAGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTAACGc         <  2:196110/140‑1 (MQ=255)

                                                                                                                                aaGATACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTAACGCTgg      <  1:1555362/140‑1 (MQ=255)

                                                                                                                                    tACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAggg                    >  1:2771503/1‑122 (MQ=255)

                                                                                                                                    tACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTAACGCTGGGCCa  >  2:1065118/1‑140 (MQ=255)

                                                                                                                                    tACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTAACGCTGGGCCa  <  2:1298378/140‑1 (MQ=255)

                                                                                                                                    tACCGGC‑AAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTAACGCTGGGCCa  >  2:1835858/1‑140 (MQ=255)

CTTTAAGCTGGCACAGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGCAAAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTAACGCTGGGCCA  >  NC_000913/469425‑469697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`