BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,443,268	Δ1 bp	coding (887/1734 nt)	tamA →	translocation and assembly module subunit TamA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,443,268	0	A	.	100.0%	680.7 / NA	160	coding (887/1734 nt)	tamA	translocation and assembly module subunit TamA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (74/86); total (74/86)

Only 100 of 160 total aligned reads displayed.

CGAAAGTATTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAA  >  NC_000913/4443133‑4443400

cgaaaGTATTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTc                                                                                                                                 >  1:797047/1‑140 (MQ=255)

 gaaaGTATTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCt                                                                                                                                >  1:2448895/1‑140 (MQ=255)

    aGTATTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGac                                                                                                                             >  2:78558/1‑140 (MQ=255)

     gTATTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGATAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGacc                                                                                                                            <  1:2586488/140‑1 (MQ=255)

     gTATTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGacc                                                                                                                            <  2:286798/140‑1 (MQ=255)

      tATTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGG‑AAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccac                                                                                                                          <  1:2319865/140‑1 (MQ=255)

       aTTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccac                                                                                                                          <  2:2868112/140‑1 (MQ=255)

       aTTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccac                                                                                                                          <  2:2328264/140‑1 (MQ=255)

       aTTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccac                                                                                                                          <  1:176760/140‑1 (MQ=255)

       aTTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccac                                                                                                                          <  1:2110848/140‑1 (MQ=255)

        ttACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccacc                                                                                                                         <  2:897138/140‑1 (MQ=255)

        ttACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccacc                                                                                                                         >  1:3477647/1‑140 (MQ=255)

        ttACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccac                                                                                                                          >  2:2708554/1‑139 (MQ=255)

        ttACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccac                                                                                                                          <  1:2708554/139‑1 (MQ=255)

          aCCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAg                                                                                                                       >  1:895447/1‑140 (MQ=255)

           ccATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGt                                                                                                                      >  1:2247347/1‑140 (MQ=255)

           ccATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGt                                                                                                                      >  1:1977799/1‑140 (MQ=255)

                gACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccacc                                                                                                                         <  2:2121995/132‑1 (MQ=255)

                gACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAg                                                                                                                 >  2:53679/1‑140 (MQ=255)

                gACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAg                                                                                                                 >  1:1463556/1‑140 (MQ=255)

                gACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAg                                                                                                                 >  2:886487/1‑140 (MQ=255)

                gACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAg                                                                                                                 >  1:260502/1‑140 (MQ=255)

                gACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTAATCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAg                                                                                                                 >  2:1037335/1‑140 (MQ=255)

                   gggCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTAt                                                                                                              >  2:197750/1‑140 (MQ=255)

                      cGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGGAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTc                                                                                                           <  1:2184918/140‑1 (MQ=255)

                      cGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGaccac                                                                                                                          >  2:1978698/1‑125 (MQ=255)

                      cGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTAc                                                                                                                    <  1:2878158/131‑1 (MQ=255)

                      cGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTc                                                                                                           >  1:2799223/1‑140 (MQ=255)

                      cGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTc                                                                                                           >  2:2415406/1‑140 (MQ=255)

                      cGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTc                                                                                                           <  2:2448895/140‑1 (MQ=255)

                      cGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTc                                                                                                           >  1:1135718/1‑140 (MQ=255)

                        tGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCcg                                                                                                         >  1:1965273/1‑140 (MQ=255)

                        tGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCcg                                                                                                         >  1:686000/1‑140 (MQ=255)

                           tttCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCgcgc                                                                                                      <  2:2799223/140‑1 (MQ=255)

                           tttCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCgcgc                                                                                                      <  1:1354451/140‑1 (MQ=255)

                            ttCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGcc                                                                                                     <  2:2247347/140‑1 (MQ=255)

                               gccgcGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGa                                                                                                  >  1:2581255/1‑140 (MQ=255)

                                    gAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGa                                                                                             <  2:686000/140‑1 (MQ=255)

                                    gAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGa                                                                                             <  2:1965273/140‑1 (MQ=255)

                                     aaCAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGAc                                                                                            >  2:3300237/1‑140 (MQ=255)

                                     aaCAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGAc                                                                                            >  1:3002687/1‑140 (MQ=255)

                                            aaCACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGAc                                                                                     <  2:3415337/140‑1 (MQ=255)

                                            aaCACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGAc                                                                                     <  1:3192008/140‑1 (MQ=255)

                                            aaCACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGAc                                                                                     <  1:3435310/140‑1 (MQ=255)

                                            aaCACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGAc                                                                                     <  2:1557580/140‑1 (MQ=255)

                                              cacCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACtt                                                                                   <  1:3300237/140‑1 (MQ=255)

                                               acCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAAc                                                                                                <  1:2734626/126‑1 (MQ=255)

                                                    cGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGa                                                                                             <  2:3054749/124‑1 (MQ=255)

                                                     gAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCtat                                                                            >  2:1866253/1‑140 (MQ=255)

                                                        aCCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATaaa                                                                         >  2:3190055/1‑140 (MQ=255)

                                                         ccGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATaaaa                                                                        >  2:2222272/1‑140 (MQ=255)

                                                            gggTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGc                                                                     <  1:822836/140‑1 (MQ=255)

                                                            gggTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGc                                                                     <  1:1502764/140‑1 (MQ=255)

                                                            gggTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGc                                                                     <  1:1673317/140‑1 (MQ=255)

                                                              gTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCg                                                                   <  2:1124133/140‑1 (MQ=255)

                                                                      ctctACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTgaa                                                           <  2:3002687/140‑1 (MQ=255)

                                                                       tctACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTgaag                                                          >  2:2268893/1‑140 (MQ=255)

                                                                         tACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTgaagaa                                                        >  1:441354/1‑140 (MQ=255)

                                                                           cGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCg                                                                   <  2:825042/127‑1 (MQ=255)

                                                                           cGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATc                                                      <  1:2268893/140‑1 (MQ=255)

                                                                            ggACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACGACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATcc                                                     >  2:299549/1‑140 (MQ=255)

                                                                              aCGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCAc                                                   <  1:3190055/140‑1 (MQ=255)

                                                                              aCGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCAc                                                   <  1:1037335/140‑1 (MQ=255)

                                                                                 tGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCa                                                    <  2:2853618/136‑1 (MQ=255)

                                                                                 tGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTgg                                                >  1:1054984/1‑140 (MQ=255)

                                                                                 tGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTgg                                                >  1:516779/1‑140 (MQ=255)

                                                                                   ggACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGaa                                              <  2:441354/140‑1 (MQ=255)

                                                                                   ggACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGaa                                              >  2:1492418/1‑140 (MQ=255)

                                                                                   ggACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGaa                                              >  1:860337/1‑140 (MQ=255)

                                                                                   ggACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGaa                                              <  2:516779/140‑1 (MQ=255)

                                                                                   ggACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGaa                                              >  2:2601559/1‑140 (MQ=255)

                                                                                   ggACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGaa                                              <  2:3468701/140‑1 (MQ=255)

                                                                                       cgcgcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCa                                                    >  2:3027442/1‑130 (MQ=255)

                                                                                       cgcgcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCa                                                    <  1:3027442/130‑1 (MQ=255)

                                                                                       cgcgcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCAc                                                   >  2:3480606/1‑131 (MQ=255)

                                                                                       cgcgcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCAc                                                   <  1:3480606/131‑1 (MQ=255)

                                                                                        gcgcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATc                                                      >  2:609971/1‑127 (MQ=255)

                                                                                        gcgcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAata                                         >  2:1087045/1‑140 (MQ=255)

                                                                                        gcgcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAata                                         <  1:646363/140‑1 (MQ=255)

                                                                                        gcgcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAata                                         >  1:2701061/1‑140 (MQ=255)

                                                                                         cgcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAata                                         >  2:585679/1‑139 (MQ=255)

                                                                                         cgcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAata                                         <  1:585679/139‑1 (MQ=255)

                                                                                          gcgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAAtatt                                       >  2:130239/1‑140 (MQ=255)

                                                                                           cgTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGaa                                              <  2:1812976/132‑1 (MQ=255)

                                                                                               aaaGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTg                                  >  1:3110485/1‑140 (MQ=255)

                                                                                                  gCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTg                               <  1:2601559/140‑1 (MQ=255)

                                                                                                   cGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGc                              >  1:326963/1‑140 (MQ=255)

                                                                                                           aaaaaGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGt                      <  1:2222272/140‑1 (MQ=255)

                                                                                                            aaaaGCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGtt                     >  1:1203912/1‑140 (MQ=255)

                                                                                                                gCCGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTaa                 <  1:1195083/140‑1 (MQ=255)

                                                                                                                  cGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGt                      >  2:2880664/1‑133 (MQ=255)

                                                                                                                  cGTGGATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGt                      <  1:2880664/133‑1 (MQ=255)

                                                                                                                     ggATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTaa                 >  2:2600220/1‑135 (MQ=255)

                                                                                                                     ggATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTaa                 <  1:2360590/135‑1 (MQ=255)

                                                                                                                     ggATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCa            <  2:1470437/140‑1 (MQ=255)

                                                                                                                     ggATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCa            <  2:1203912/140‑1 (MQ=255)

                                                                                                                     ggATGAACTCTTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCa            <  2:797047/140‑1 (MQ=255)

                                                                                                                              ctTATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGa   >  2:1307209/1‑140 (MQ=255)

                                                                                                                               ttATGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGaa  <  1:152842/140‑1 (MQ=255)

                                                                                                                                 aTGGTC‑CAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGAc       >  1:1778957/1‑133 (MQ=255)

CGAAAGTATTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAA  >  NC_000913/4443133‑4443400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`