| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 705,972 | (T)9→8 | intergenic (+82/‑121) | nagE → / → glnS | N‑acetylglucosamine specific PTS enzyme IIABC component/glutamine‑‑tRNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 705,964 | 0 | T | . | 99.0% | 396.5 / ‑2.0 | 96 | intergenic (+74/‑129) | nagE/glnS | N‑acetylglucosamine specific PTS enzyme IIABC component/glutamine‑‑tRNA ligase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base . (41/54); total (42/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
GCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCTTTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTG > NC_000913/705837‑706099 | gCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTtcatca < 1:2574070/140‑1 (MQ=255) cAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCatcaatc < 1:2204702/140‑1 (MQ=255) aGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGTGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCatcaatca < 2:2803723/140‑1 (MQ=255) aGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCatcaatca < 2:454639/140‑1 (MQ=255) gggCCCTATTGGTGCGGGGCAAACACCGGTGTATGAAAGAAAAAAGTAATTTGGCTTACGCCTGATCCAGTGCTCCGTCATCGCAATCAACAAAAAGAAGCGGGGGAGATTTTCTCCGCC‑CCTTTTTTTTCATCAatcat < 2:1300321/140‑1 (MQ=255) gggCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAatcat < 1:405489/140‑1 (MQ=255) atatTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCa < 1:375420/140‑1 (MQ=255) atatTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCa < 2:2617093/140‑1 (MQ=255) atTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑a < 1:2970239/140‑1 (MQ=255) ttGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑aa < 1:2606718/140‑1 (MQ=255) ttGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑aa < 1:1564876/140‑1 (MQ=255) gggTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGt < 2:760444/140‑1 (MQ=255) aaCACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGAtt > 1:3263817/1‑140 (MQ=255) cGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCaa > 2:3333411/1‑140 (MQ=255) gCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AAt > 2:899973/1‑122 (MQ=255) gCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AAt < 1:899973/122‑1 (MQ=255) aTGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTaa < 1:1513059/140‑1 (MQ=255) aaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTaaaaaa < 2:3219192/140‑1 (MQ=255) aaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTaaaaaa > 2:2041846/1‑140 (MQ=255) cAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTa > 2:3229799/1‑140 (MQ=255) aaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCTTTTTTTTT‑ATTAATTATTCCCATAAATCTTTGTT‑GGTTATCAATTTTTAAAAACTaaa > 2:2527696/1‑139 (MQ=255) aaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAAc < 1:735343/140‑1 (MQ=255) aaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAAc > 2:591332/1‑140 (MQ=255) aaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAAc < 1:2921607/140‑1 (MQ=255) aaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAg < 1:1321795/140‑1 (MQ=255) gTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGtt < 1:1899192/140‑1 (MQ=255) aaTCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGt < 1:1482619/140‑1 (MQ=255) tCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCa < 1:1450756/140‑1 (MQ=255) cTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCAGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCt > 2:3486185/1‑140 (MQ=255) tttATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTg > 1:701448/1‑140 (MQ=255) tATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTc > 1:2851038/1‑140 (MQ=255) tATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTc > 2:2262162/1‑140 (MQ=255) tATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTc < 2:461197/140‑1 (MQ=255) aTGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTcc < 1:960437/140‑1 (MQ=255) aTGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTcc < 1:2332209/140‑1 (MQ=255) aTGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTcc < 1:3333411/140‑1 (MQ=255) aTGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTcc < 2:2851038/140‑1 (MQ=255) tGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTccc < 2:3341780/140‑1 (MQ=255) tGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTccc < 1:1428830/140‑1 (MQ=255) gCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCg < 1:3333021/140‑1 (MQ=255) gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTta < 1:2613093/140‑1 (MQ=255) gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTta > 2:1215457/1‑140 (MQ=255) gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTta > 1:2214969/1‑140 (MQ=255) gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTta > 2:2495907/1‑140 (MQ=255) gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTta > 2:3402211/1‑140 (MQ=255) gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTta > 2:439212/1‑140 (MQ=255) gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTta < 1:1215457/140‑1 (MQ=255) aTGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTtat > 1:2607919/1‑140 (MQ=255) aTGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTtat < 2:1872037/140‑1 (MQ=255) gACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGa > 1:3366532/1‑140 (MQ=255) aCGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGAt > 2:2446434/1‑140 (MQ=255) aCGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGAt > 1:737869/1‑140 (MQ=255) aCGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGAt > 2:190608/1‑140 (MQ=255) aCGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGAt > 2:1700710/1‑140 (MQ=255) ttGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATa < 2:2607919/140‑1 (MQ=255) ttGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATa < 1:2194543/140‑1 (MQ=255) ttGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATa < 1:1090294/140‑1 (MQ=255) tGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATAc < 1:2647480/140‑1 (MQ=255) gAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACg < 2:759365/140‑1 (MQ=255) gAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACg < 1:241207/140‑1 (MQ=255) gAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACg > 2:2908528/1‑140 (MQ=255) gAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACg < 1:439212/140‑1 (MQ=255) gAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACg < 2:2536590/140‑1 (MQ=255) aGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGc < 1:2446434/140‑1 (MQ=255) tCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGtt > 2:3246142/1‑140 (MQ=255) tCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGtt < 1:1487348/140‑1 (MQ=255) tCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGtt > 1:2344235/1‑140 (MQ=255) cGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTta > 1:1928906/1‑140 (MQ=255) cATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATATGcc > 2:1308871/1‑134 (MQ=255) cATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATATGcc < 1:1308871/134‑1 (MQ=255) cATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTtata > 1:2179330/1‑140 (MQ=255) aTCCAACAATGACAAGCGGTGGAGATCTTCTCAGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATAc < 1:3486185/140‑1 (MQ=255) caaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACgttgtt > 1:70044/1‑140 (MQ=255) tGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTAc > 2:3266207/1‑140 (MQ=255) tGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTAc > 2:1019318/1‑140 (MQ=255) gACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACg > 1:2376752/1‑140 (MQ=255) aCAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGc > 1:1671560/1‑140 (MQ=255) cAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCt < 2:737869/140‑1 (MQ=255) cAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCt < 1:3214187/140‑1 (MQ=255) aGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCttt > 2:106834/1‑140 (MQ=255) cGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGa > 2:2723238/1‑140 (MQ=255) cGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGa > 1:1003685/1‑140 (MQ=255) gTGGAGATCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAgg < 1:2908528/140‑1 (MQ=255) gagaTCTTCTCTGCCGC‑TTTTTTTTAATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTAAGCCTGCCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAAt > 2:754420/1‑140 (MQ=255) agaTCTTCTCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATc < 1:135292/140‑1 (MQ=255) cttctCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACg < 1:2262162/140‑1 (MQ=255) cttctCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACg < 2:70044/140‑1 (MQ=255) cttctCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACg < 1:3229799/140‑1 (MQ=255) ttctCTGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGa < 2:2376752/140‑1 (MQ=255) ctctGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATc > 2:2294805/1‑133 (MQ=255) ctctGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATc < 1:2294805/133‑1 (MQ=255) ctctGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGAtg > 2:1296892/1‑140 (MQ=255) ctGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGAtgag < 2:1207505/140‑1 (MQ=255) ctGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGAtgag > 1:527001/1‑140 (MQ=255) tGCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGAtgagt > 2:1987049/1‑140 (MQ=255) gCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGAtgagtg > 2:2626695/1‑140 (MQ=255) gCCGC‑TTTTTTTTCATCAATCATCCCCAT‑AATCCTTGCTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGAtgagtg < 1:1412255/140‑1 (MQ=255) | GCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCTTTTTTTTTCATCAATCATCCCCAT‑AATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTG > NC_000913/705837‑706099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |