BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,494,883	(C)_5→4	coding (189/924 nt)	ydcI ←	putative DNA‑binding transcriptional repressor YdcI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,494,879	0	C	.	100.0%	1040.1 / NA	244	coding (193/924 nt)	ydcI	putative DNA‑binding transcriptional repressor YdcI
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (121/123); total (121/123)

Only 100 of 247 total aligned reads displayed.

CAGTAGGTAGTGCACCAACCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCGCCCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTAC  >  NC_000913/1494741‑1495014

         gTGCACCAACCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTgacgac                                                                                                                              <  1:1681155/140‑1 (MQ=255)

             aCCAACCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTgacgac                                                                                                                              <  2:583779/136‑1 (MQ=255)

               cAACCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCt                                                                                                                        >  1:2158183/1‑140 (MQ=255)

               cAACCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCC‑GGTAAGGTAAGTTGCG‑CCCCTGACGACCACGc                                                                                                                         <  1:3453571/138‑1 (MQ=255)

               cAACCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCC‑GGTAAGGTAAGTTGCG‑CCCCTGACGACCACGc                                                                                                                         >  2:3453571/1‑138 (MQ=255)

                aaCCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTc                                                                                                                       >  1:2791468/1‑140 (MQ=255)

                 aCCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCa                                                                                                                      >  2:874226/1‑140 (MQ=255)

                 aCCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCa                                                                                                                      >  2:3469461/1‑140 (MQ=255)

                    cTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTGAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTc                                                                                                                       <  2:1913798/136‑1 (MQ=255)

                        cgacATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagc                                                                                                               <  2:2151028/140‑1 (MQ=255)

                        cgacATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagc                                                                                                               >  2:11795/1‑140 (MQ=255)

                           catcatTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagcgag                                                                                                            <  1:1185894/140‑1 (MQ=255)

                            atcatTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagcgagc                                                                                                           >  2:51885/1‑140 (MQ=255)

                            atcatTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagcgagc                                                                                                           >  1:913632/1‑140 (MQ=255)

                            atcatTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagcgagc                                                                                                           >  1:80406/1‑140 (MQ=255)

                            atcatTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagcgagc                                                                                                           >  2:854762/1‑140 (MQ=255)

                            atcatTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagcgag                                                                                                            <  2:2691577/139‑1 (MQ=255)

                            atcatTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagcgag                                                                                                            <  1:3134896/139‑1 (MQ=255)

                              catTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCAc                                                                                                                           <  2:2076904/122‑1 (MQ=255)

                                 tattaAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAg                                                                                                      <  1:854762/140‑1 (MQ=255)

                                 tattaAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAg                                                                                                      <  1:2588045/140‑1 (MQ=255)

                                     aaGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAg                                                                                                  >  2:1457102/1‑140 (MQ=255)

                                     aaGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAg                                                                                                  <  1:2909345/140‑1 (MQ=255)

                                      aGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCGAACAagc                                                                                                               >  2:2294959/1‑126 (MQ=255)

                                      aGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagcgag                                                                                                            >  1:1729339/1‑129 (MQ=255)

                                      aGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAagcgag                                                                                                            <  2:1729339/129‑1 (MQ=255)

                                      aGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAgc                                                                                                 >  2:3319333/1‑140 (MQ=255)

                                        aCCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGTG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAg                                                                                                  <  2:6603/137‑1 (MQ=255)

                                        aCCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCa                                                                                                   <  1:1817260/136‑1 (MQ=255)

                                        aCCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCa                                                                                                   >  2:1817260/1‑136 (MQ=255)

                                          cttcttTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAgctgct                                                                                             >  2:3428470/1‑140 (MQ=255)

                                          cttcttTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAgctgct                                                                                             <  2:714834/140‑1 (MQ=255)

                                           ttcttTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTc                                                                                            >  1:1471079/1‑140 (MQ=255)

                                           ttcttTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTc                                                                                            >  2:3222552/1‑140 (MQ=255)

                                            tcttTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTcc                                                                                           >  1:2627611/1‑140 (MQ=255)

                                            tcttTACGATGAAGAGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAgc                                                                                                 <  2:2532577/134‑1 (MQ=255)

                                             cttTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAgctgct                                                                                             <  1:144759/137‑1 (MQ=255)

                                             cttTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCa                                                                                          >  2:3082536/1‑140 (MQ=255)

                                             cttTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCa                                                                                          >  1:573396/1‑140 (MQ=255)

                                              tttACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAg                                                                                         <  1:1263892/140‑1 (MQ=255)

                                              tttACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAg                                                                                         <  1:542223/140‑1 (MQ=255)

                                                tACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGtt                                                                                       <  1:669168/140‑1 (MQ=255)

                                                     tGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcatt                                                                                   <  2:2332134/139‑1 (MQ=255)

                                                     tGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcatt                                                                                   >  1:2332134/1‑139 (MQ=255)

                                                      gAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 <  1:1156791/140‑1 (MQ=255)

                                                      gAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 <  2:3406799/140‑1 (MQ=255)

                                                      gAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 >  1:791691/1‑140 (MQ=255)

                                                      gAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 <  2:2602704/140‑1 (MQ=255)

                                                      gAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 <  2:3124830/140‑1 (MQ=255)

                                                      gAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 <  2:1268526/140‑1 (MQ=255)

                                                      gAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 <  2:1662135/140‑1 (MQ=255)

                                                      gAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 <  1:2363610/140‑1 (MQ=255)

                                                       aaGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 >  1:1947441/1‑139 (MQ=255)

                                                        aGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 <  1:2830162/138‑1 (MQ=255)

                                                        aGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 >  2:2830162/1‑138 (MQ=255)

                                                        aGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcatt                                                                                   >  1:3107650/1‑136 (MQ=255)

                                                            aCCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcattca                                                                                 >  1:2980956/1‑134 (MQ=255)

                                                              cGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTa                                                                         <  2:1471079/140‑1 (MQ=255)

                                                              cGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTa                                                                         <  1:3428470/140‑1 (MQ=255)

                                                              cGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTa                                                                         >  1:369140/1‑140 (MQ=255)

                                                                tCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTaga                                                                       <  1:2268992/140‑1 (MQ=255)

                                                                tCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTaga                                                                       <  1:3222552/140‑1 (MQ=255)

                                                                 ccGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGttcatt                                                                                   <  2:1303427/127‑1 (MQ=255)

                                                                 ccGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTagag                                                                      <  1:2096125/140‑1 (MQ=255)

                                                                 ccGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTagag                                                                      >  1:250449/1‑140 (MQ=255)

                                                                   ggCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTagagag                                                                    <  2:2131688/140‑1 (MQ=255)

                                                                     cAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAgcg                                                                  <  2:2180404/140‑1 (MQ=255)

                                                                     cAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAgcg                                                                  <  1:2651674/140‑1 (MQ=255)

                                                                        tgtTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCAAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAg                                                               >  1:2682242/1‑140 (MQ=255)

                                                                         gtTGATGGCGTCAAGAACTCTGACTACATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAgg                                                              <  2:2868159/140‑1 (MQ=255)

                                                                             aTGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGa                                                          <  2:3148789/140‑1 (MQ=255)

                                                                               ggCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACt                                                        >  2:74368/1‑140 (MQ=255)

                                                                               ggCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACt                                                        <  1:74368/140‑1 (MQ=255)

                                                                                  gTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCaa                                                     >  1:1034699/1‑140 (MQ=255)

                                                                                    cAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAAt                                                   >  1:391818/1‑140 (MQ=255)

                                                                                    cAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAAt                                                   >  2:1996575/1‑140 (MQ=255)

                                                                                      aGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTa                                                 <  2:375961/140‑1 (MQ=255)

                                                                                      aGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTa                                                 <  1:3391991/140‑1 (MQ=255)

                                                                                      aGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTa                                                 <  1:1706389/140‑1 (MQ=255)

                                                                                             tGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGttt                                          >  1:1505695/1‑140 (MQ=255)

                                                                                               aCTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCa                                        >  1:2026871/1‑140 (MQ=255)

                                                                                                  gCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTa                                                 >  1:214083/1‑128 (MQ=255)

                                                                                                  gCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGcc                                     <  2:1034699/140‑1 (MQ=255)

                                                                                                   cATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCcg                                    >  2:2369618/1‑140 (MQ=255)

                                                                                                    aTGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCcgc                                   <  2:76860/140‑1 (MQ=255)

                                                                                                     tGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCcgcg                                  >  1:2083899/1‑140 (MQ=255)

                                                                                                     tGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCcgcg                                  >  2:2407601/1‑140 (MQ=255)

                                                                                                         ttAAAAATTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCcgcg                                  >  1:1605834/1‑136 (MQ=255)

                                                                                                            aaaaTTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCa                           <  2:369140/140‑1 (MQ=255)

                                                                                                            aaaaTTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCa                           <  2:1686527/140‑1 (MQ=255)

                                                                                                            aaaaTTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCa                           <  2:1586827/140‑1 (MQ=255)

                                                                                                             aaaTTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCaa                          >  2:248449/1‑140 (MQ=255)

                                                                                                              aaTTGTTCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCaaa                         >  1:3358390/1‑140 (MQ=255)

                                                                                                                    tCGCCGGGTAAGGTAAGTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCt                   <  1:1371537/140‑1 (MQ=255)

                                                                                                                             aaggtaagTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCg          <  2:2627611/140‑1 (MQ=255)

                                                                                                                             aaggtaagTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCg          <  1:2285981/140‑1 (MQ=255)

                                                                                                                                   agTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCg          <  1:651112/134‑1 (MQ=255)

                                                                                                                                    gTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTa   >  1:2391078/1‑140 (MQ=255)

                                                                                                                                    gTTGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTa   <  1:1090614/140‑1 (MQ=255)

                                                                                                                                     ttGCG‑CCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTAc  <  2:2678507/140‑1 (MQ=255)

CAGTAGGTAGTGCACCAACCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCGCCCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTAC  >  NC_000913/1494741‑1495014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`