BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,465,409	Δ1 bp	coding (109/933 nt)	yfdC →	inner membrane protein YfdC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,465,407	0	G	.	100.0%	834.4 / NA	196	coding (107/933 nt)	yfdC	inner membrane protein YfdC
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (103/93); total (103/93)

Only 100 of 200 total aligned reads displayed.

GCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCCGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTAC‑TGGCAAAAGGGATATTTCA  >  NC_000913/2465271‑2465542

  tataCGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCCggcgat                                                                                                                                     <  2:2523609/140‑5 (MQ=255)

    taCGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATgg                                                                                                                                  >  1:3247318/1‑140 (MQ=255)

      cGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCa                                                                                                                                <  1:2850622/140‑1 (MQ=255)

       gTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCaa                                                                                                                               <  2:237867/140‑1 (MQ=255)

       gTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCaa                                                                                                                               <  2:1564511/140‑1 (MQ=255)

          cTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGc                                                                                                                                 >  2:317670/1‑135 (MQ=255)

          cTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTc                                                                                                                            >  2:2047887/1‑140 (MQ=255)

          cTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTc                                                                                                                            >  2:208224/1‑140 (MQ=255)

          cTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTc                                                                                                                            >  1:2102020/1‑140 (MQ=255)

              ttCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGa                                                                                                                        >  2:862928/1‑140 (MQ=255)

              ttCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGa                                                                                                                        <  2:2935561/140‑1 (MQ=255)

                cAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGc                                                                                                                      <  1:2985978/140‑1 (MQ=255)

                 aagagaagagACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCa                                                                                                                     <  1:1476653/140‑1 (MQ=255)

                 aagagaagagACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCAC‑GGCGATGGCAATTCATGAGCa                                                                                                                     <  1:1567433/140‑1 (MQ=255)

                  agagaagagaCCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCat                                                                                                                    <  1:3325972/140‑1 (MQ=255)

                   gagaagagaCCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCata                                                                                                                   >  2:1937618/1‑140 (MQ=255)

                   gagaagagaCCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCata                                                                                                                   <  1:2812466/140‑1 (MQ=255)

                        gagaCCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGc                                                                                                              >  1:1368078/1‑140 (MQ=255)

                         agaCCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCata                                                                                                                   >  1:810795/1‑134 (MQ=255)

                         agaCCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCata                                                                                                                   <  2:810795/134‑1 (MQ=255)

                         agaCCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGcc                                                                                                             >  1:1780735/1‑140 (MQ=255)

                           aCCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAg                                                                                                           >  2:1327764/1‑140 (MQ=255)

                           aCCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAg                                                                                                           >  2:396718/1‑140 (MQ=255)

                            ccATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAgg                                                                                                          >  1:2500553/1‑140 (MQ=255)

                             cATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGa                                                                                                         >  2:1109030/1‑140 (MQ=255)

                              aTGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAGGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGAt                                                                                                        >  2:2729903/1‑140 (MQ=255)

                                ggACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATgg                                                                                                      >  2:2842174/1‑140 (MQ=255)

                                ggACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATgg                                                                                                      >  1:1499011/1‑140 (MQ=255)

                                ggACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATgg                                                                                                      >  2:609078/1‑140 (MQ=255)

                                ggACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATgg                                                                                                      >  1:3166247/1‑140 (MQ=255)

                                ggACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATgg                                                                                                      >  1:1014341/1‑140 (MQ=255)

                                   cAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGa                                                                                                   >  1:914518/1‑140 (MQ=255)

                                      cGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGc                                                                                                              >  1:1625447/1‑126 (MQ=255)

                                      cGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGaaaa                                                                                                <  2:2947214/140‑1 (MQ=255)

                                      cGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGaaaa                                                                                                >  2:2952910/1‑140 (MQ=255)

                                      cGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGaaaa                                                                                                >  2:3431841/1‑140 (MQ=255)

                                             aTTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTg                                                                                         <  1:1100500/140‑1 (MQ=255)

                                                   cAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAAcgc                                                                                   >  2:1873465/1‑140 (MQ=255)

                                                     acacAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGa                                                                                 <  2:914518/140‑1 (MQ=255)

                                                     acacAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGa                                                                                 <  2:3166247/140‑1 (MQ=255)

                                                     acacAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGa                                                                                 <  2:2640089/140‑1 (MQ=255)

                                                      cacaGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGaa                                                                                      <  1:336955/134‑1 (MQ=255)

                                                      cacaGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGaa                                                                                      >  2:336955/1‑134 (MQ=255)

                                                      cacaGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGAc                                                                                >  2:3057624/1‑140 (MQ=255)

                                                        caGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAAGAGATGAAGTCCGACGCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGc                                                                              <  1:1990769/140‑1 (MQ=255)

                                                         aGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCa                                                                             >  2:3252116/1‑140 (MQ=255)

                                                          gCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCaa                                                                            <  1:2947825/140‑1 (MQ=255)

                                                          gCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCaa                                                                            >  2:2376383/1‑140 (MQ=255)

                                                          gCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCaa                                                                            <  1:271758/140‑1 (MQ=255)

                                                           cgacgaAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAAt                                                                           >  2:2113454/1‑140 (MQ=255)

                                                           cgacgaAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAAt                                                                           >  1:2413749/1‑140 (MQ=255)

                                                           cgacgaAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAAt                                                                           >  2:1588911/1‑140 (MQ=255)

                                                           cgacgaAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAAt                                                                           >  2:1548229/1‑140 (MQ=255)

                                                           cgacgaAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAAt                                                                           >  1:549034/1‑140 (MQ=255)

                                                             acgaAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATgg                                                                         <  1:396718/140‑1 (MQ=255)

                                                             acgaAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATgg                                                                         <  2:1499011/140‑1 (MQ=255)

                                                              cgaAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGgc                                                                        <  2:108317/140‑1 (MQ=255)

                                                                caaTTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGGGAAAAAGAGCTGGAACGCGACGCAACGgcgc                                                                      >  2:1237390/2‑140 (MQ=255)

                                                                aaaTTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCaa                                                                            <  2:1928289/134‑1 (MQ=255)

                                                                aaaTTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCaa                                                                            >  1:1928289/1‑134 (MQ=255)

                                                                aaaTTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGgcgc                                                                      >  1:2579288/1‑140 (MQ=255)

                                                                aaaTTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGgcgc                                                                      >  1:2449190/1‑140 (MQ=255)

                                                                aaaTTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGgcgc                                                                      >  1:218647/1‑140 (MQ=255)

                                                                aaaTTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGgcg                                                                       >  2:1191568/1‑139 (MQ=255)

                                                                aaaTTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGgcg                                                                       <  1:1191568/139‑1 (MQ=255)

                                                                aaaTTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGATGGAACGCGACGCAATGgcg                                                                       <  1:1273961/139‑1 (MQ=255)

                                                                    tGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACt                                                                  <  1:1853791/140‑1 (MQ=255)

                                                                       aGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACtgtg                                                               <  2:3460507/140‑1 (MQ=255)

                                                                           gagaGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCa                                                           >  2:1828931/1‑140 (MQ=255)

                                                                            agagCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAg                                                          <  2:2008834/140‑1 (MQ=255)

                                                                            agagCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAg                                                          >  1:1659891/1‑140 (MQ=255)

                                                                                cGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCAt                                                      <  2:2449190/140‑1 (MQ=255)

                                                                                cGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCAt                                                      >  2:528840/1‑140 (MQ=255)

                                                                                   agaaAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTgc                                                   >  2:1689167/1‑140 (MQ=255)

                                                                                     aaaaaGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTgcgg                                                 <  1:1710066/140‑1 (MQ=255)

                                                                                      aaaaGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTgcggc                                                <  1:3199772/140‑1 (MQ=255)

                                                                                          gagCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt                                            <  1:201129/140‑1 (MQ=255)

                                                                                          gagCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt                                            <  2:3329491/140‑1 (MQ=255)

                                                                                             cgcgGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTg                                         >  1:2818489/1‑140 (MQ=255)

                                                                                               cgGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGtatcgg                                       >  1:3115378/1‑135 (MQ=255)

                                                                                               cgGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTc                                       >  1:477666/1‑140 (MQ=255)

                                                                                                  cAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGAt                                    <  2:1043115/140‑1 (MQ=255)

                                                                                                     aaaaaTAGAAATAGATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGTCATTGCGGCGGGTCTGTCGATggg                                 <  2:669650/140‑1 (MQ=255)

                                                                                                       aaatagaaatagATGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGgcg                               <  1:208224/140‑1 (MQ=255)

                                                                                                         atagaaatagaTGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt                             <  1:3431841/140‑1 (MQ=255)

                                                                                                               atagaTGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTa                       <  1:27379/140‑1 (MQ=255)

                                                                                                               atagaTGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTa                       <  2:30665/140‑1 (MQ=255)

                                                                                                                 agaTGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTATGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTAC‑t                    <  1:2994409/140‑1 (MQ=255)

                                                                                                                  gaTGAAGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTAC‑Tg                   <  2:2544997/140‑1 (MQ=255)

                                                                                                                       aGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGGTGGGGGCGTCGCTAC‑TTGCgaa              >  2:2791203/1‑140 (MQ=255)

                                                                                                                       aGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTAC‑TGGCaaa              <  2:1780735/140‑1 (MQ=255)

                                                                                                                       aGACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGAGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGGCGGGCGGTGGGGGCTTGGTGAC‑TGGGaaa              >  1:1170587/1‑140 (MQ=255)

                                                                                                                        gACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTAC‑TGGCaaa              >  2:1177535/1‑139 (MQ=255)

                                                                                                                        gACCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGGCTGTTGGTGGGCGGTTCGTTAC‑TGGCaaaa             >  1:973058/1‑140 (MQ=255)

                                                                                                                         aCCGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGGCTGTCGATGGGGGCTTCGTTAC‑TTGCaaaaa            >  1:1323428/1‑139 (MQ=255)

                                                                                                                           cGACTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGGCTGTCGATGGGCGCCTCGTTTC‑TGGCAAAAggg          >  2:3220188/1‑140 (MQ=255)

                                                                                                                             aCTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGGCTTTCGGTGGGGGCGTCGTTTC‑TGGCAAAAgggga        >  1:1539497/1‑138 (MQ=255)

                                                                                                                             aCTCCCCTCCC‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGGCTGTCGATGGGGGGTTCGTTTC‑TGGCAAAAgggga        >  2:781010/1‑138 (MQ=255)

                                                                                                                                 ccctccc‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTAC‑TGGCAAAAGGGATAttt    <  2:477666/140‑1 (MQ=255)

                                                                                                                                   ctccc‑GGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGGCTGTCGGTGGGGGCTTTGTTTCTTGGGAAAAGGGGAAttta   >  1:690144/1‑139 (MQ=255)

GCTATACGTGCTAATTCAAGAGAAGAGACCATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCCGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTAC‑TGGCAAAAGGGATATTTCA  >  NC_000913/2465271‑2465542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`