BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,516,070	(T)_5→6	coding (1237/1287 nt)	damX ←	cell division protein DamX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,516,065	1	.	T	100.0%	800.7 / NA	224	N414K (AAC→AAA)	damX	cell division protein DamX
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (105/119); total (105/119)

Only 100 of 260 total aligned reads displayed.

TACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑TTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAG  >  NC_000913/3515928‑3516199

tACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tt                                                                                                                                         >  2:1516971/1‑140 (MQ=255)

tACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tt                                                                                                                                         >  1:3149257/1‑140 (MQ=255)

tACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tt                                                                                                                                         >  1:2171557/1‑140 (MQ=255)

  cacCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tttt                                                                                                                                       >  2:2123586/1‑140 (MQ=255)

   acCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttt                                                                                                                                      >  2:137372/1‑140 (MQ=255)

     cTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttg                                                                                                                                    >  2:2382135/1‑138 (MQ=255)

     cTTCTCCGGCTGTGGAGAAAGCCCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGTTAACCTTCATTACTTCAGATCGGCCTGTACCTTACGCAGCGGTTTCGCCCACGGG‑ctttttg                                                                                                                                    >  2:2263515/1‑138 (MQ=255)

       tctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggc                                                                                                                                  >  1:864772/1‑136 (MQ=255)

       tctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggc                                                                                                                                  <  1:2382135/140‑5 (MQ=255)

        ctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggcc                                                                                                                                 >  1:1125020/1‑135 (MQ=255)

        ctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggcc                                                                                                                                 >  1:2809955/1‑135 (MQ=255)

        ctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggcc                                                                                                                                 <  2:243864/140‑6 (MQ=255)

        ctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggcc                                                                                                                                 >  1:1891296/1‑135 (MQ=255)

        ctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tttt                                                                                                                                       <  2:2787937/134‑1 (MQ=255)

         tcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCt                                                                                                                                 >  2:2581567/1‑140 (MQ=255)

         tcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tttt                                                                                                                                       <  2:1282883/133‑1 (MQ=255)

         tcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑tttt                                                                                                                                       >  1:1282883/1‑133 (MQ=255)

            ggCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGa                                                                                                                              <  2:1032205/140‑1 (MQ=255)

                gtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATc                                                                                                                          <  2:1692814/140‑1 (MQ=255)

                 tgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATct                                                                                                                         <  1:1751137/140‑1 (MQ=255)

                 tgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATct                                                                                                                         >  1:3291526/1‑140 (MQ=255)

                 tgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATct                                                                                                                         >  2:460337/1‑140 (MQ=255)

                 tgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATct                                                                                                                         >  1:1613814/1‑140 (MQ=255)

                 tgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑ttttttggcc                                                                                                                                 >  2:1120519/1‑126 (MQ=255)

                     gaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATctgctg                                                                                                                     <  2:2771651/140‑1 (MQ=255)

                     gaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATctgctg                                                                                                                     <  1:2455517/140‑1 (MQ=255)

                     gaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATctgctg                                                                                                                     <  2:3219131/140‑1 (MQ=255)

                       aaGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGc                                                                                                                   <  1:214377/140‑1 (MQ=255)

                          cTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAt                                                                                                                >  2:2983082/1‑140 (MQ=255)

                           tCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑g                                                                                                            >  1:481139/1‑140 (MQ=255)

                                   cATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATAcc                                                                                                    >  1:3097701/1‑140 (MQ=255)

                                     tCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGc                                                                                                  >  1:1486520/1‑140 (MQ=255)

                                          cgcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCttttt                                                                                             >  1:725183/1‑140 (MQ=255)

                                           gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCtttttt                                                                                            >  1:3044781/1‑140 (MQ=255)

                                               cAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGcc                                                                                        <  2:2171557/140‑1 (MQ=255)

                                                 ggCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCctc                                                                                      >  1:1045673/1‑140 (MQ=255)

                                                 ggCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCctc                                                                                      <  2:2461831/140‑1 (MQ=255)

                                                      cTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTcttctt                                                                                 >  2:2857/1‑140 (MQ=255)

                                                       tCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCttt                                                                                >  2:2368800/1‑140 (MQ=255)

                                                           gCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGaa                                                                            <  2:3161450/140‑1 (MQ=255)

                                                           gCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGaa                                                                            <  2:3044781/140‑1 (MQ=255)

                                                           gCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGaa                                                                            <  1:45613/140‑1 (MQ=255)

                                                            cAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAATGTAGTAGATACCGCTTTTTTCGCCTCTTCTTTCg                                                                              <  1:2748807/140‑1 (MQ=255)

                                                                  tAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTaca                                                                     <  1:896516/140‑1 (MQ=255)

                                                                  tAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTaca                                                                     <  1:584880/140‑1 (MQ=255)

                                                                  tAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTaca                                                                     <  1:3449910/140‑1 (MQ=255)

                                                                      ccATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGcc                                                                 <  2:2035357/140‑1 (MQ=255)

                                                                      ccATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGcc                                                                 <  2:725183/140‑1 (MQ=255)

                                                                       cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTcttctt                                                                                 >  2:770579/1‑123 (MQ=255)

                                                                       cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTcttctt                                                                                 <  1:770579/123‑1 (MQ=255)

                                                                       cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCa                                                                <  1:356808/140‑1 (MQ=255)

                                                                         ttGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTacacctgtct                                                              >  2:640615/1‑134 (MQ=255)

                                                                         ttGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCa                                                                >  2:1616537/1‑138 (MQ=255)

                                                                         ttGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCa                                                                <  1:1616537/138‑1 (MQ=255)

                                                                          tGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCa                                                                <  1:169720/137‑1 (MQ=255)

                                                                          tGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGaa                                                             >  2:2108668/1‑140 (MQ=255)

                                                                            cGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAAc                                                           <  2:701874/140‑1 (MQ=255)

                                                                                 gaTAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa                                                      >  1:3423745/1‑140 (MQ=255)

                                                                                 gaTAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa                                                      >  1:2191915/1‑140 (MQ=255)

                                                                                    aaCCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTGGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa                                                      >  2:848078/1‑137 (MQ=255)

                                                                                        ttGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCa                                               <  1:2108668/140‑1 (MQ=255)

                                                                                         tGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCAc                                              >  1:2041470/1‑140 (MQ=255)

                                                                                         tGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCAc                                              >  1:290777/1‑140 (MQ=255)

                                                                                           aTTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACgg                                            >  1:2337282/1‑140 (MQ=255)

                                                                                            ttACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACgg                                            <  2:269799/139‑1 (MQ=255)

                                                                                            ttACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGc                                           >  2:117155/1‑140 (MQ=255)

                                                                                             tACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCt                                          <  1:1578088/140‑1 (MQ=255)

                                                                                             tACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCt                                          <  1:1903976/140‑1 (MQ=255)

                                                                                                ttCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa                                                      <  1:3478561/125‑1 (MQ=255)

                                                                                                ttCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGAc                                       >  1:1244783/1‑140 (MQ=255)

                                                                                                ttCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGAc                                       >  2:3454264/1‑140 (MQ=255)

                                                                                                     aTCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATAcc                                                <  1:3045344/126‑1 (MQ=255)

                                                                                                     aTCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTa                                  >  2:1407338/1‑140 (MQ=255)

                                                                                                     aTCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTa                                  >  1:109461/1‑140 (MQ=255)

                                                                                                     aTCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTa                                  <  2:3149257/140‑1 (MQ=255)

                                                                                                     aTCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTa                                  >  2:1933632/1‑140 (MQ=255)

                                                                                                       cGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTAcg                                <  1:1772155/140‑1 (MQ=255)

                                                                                                       cGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGAAACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTAcg                                >  2:3416798/1‑140 (MQ=255)

                                                                                                         gCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTAcgcg                              <  1:2610872/140‑1 (MQ=255)

                                                                                                         gCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTAcgcg                              <  2:178698/140‑1 (MQ=255)

                                                                                                          ccTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgt                             >  1:676604/1‑140 (MQ=255)

                                                                                                           cTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                            <  1:1057424/140‑1 (MQ=255)

                                                                                                           cTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                            <  2:116234/140‑1 (MQ=255)

                                                                                                           cTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                            <  2:3354083/140‑1 (MQ=255)

                                                                                                           cTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                            <  1:1946762/140‑1 (MQ=255)

                                                                                                           cTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                            <  1:3205864/140‑1 (MQ=255)

                                                                                                              tACCTGACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGtt                         >  1:2965587/1‑140 (MQ=255)

                                                                                                                   gACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATa                    >  2:1738622/1‑140 (MQ=255)

                                                                                                                   gACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATa                    <  2:3055579/140‑1 (MQ=255)

                                                                                                                   gACGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATa                    <  2:1602451/140‑1 (MQ=255)

                                                                                                                    aCGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                            <  1:2549796/131‑1 (MQ=255)

                                                                                                                    aCGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGtt                         <  1:1528897/134‑1 (MQ=255)

                                                                                                                    aCGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAg                   >  1:2698522/1‑140 (MQ=255)

                                                                                                                     cGCAGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTATTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGa                  <  1:1402065/140‑1 (MQ=255)

                                                                                                                        aGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACaa               >  1:624964/1‑140 (MQ=255)

                                                                                                                        aGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACaa               <  2:109461/140‑1 (MQ=255)

                                                                                                                        aGCGGTTTCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACaa               >  2:1575398/1‑140 (MQ=255)

                                                                                                                              ttCGCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGt         <  2:350655/140‑1 (MQ=255)

                                                                                                                                 gCCCACGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGtttt      <  1:1309983/140‑1 (MQ=255)

                                                                                                                                     aCGGGTTTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAg  <  1:1354887/140‑1 (MQ=255)

TACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGG‑TTTTTGGCCTGGACATCTGCTGGCAAT‑‑‑GTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAG  >  NC_000913/3515928‑3516199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`