| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,682,126 | A→G | intergenic (‑186/+35) | yhjJ ← / ← dctA | peptidase M16 family protein/C4 dicarboxylate/orotate:H(+) symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,682,126 | 0 | A | G | 99.5% | 736.2 / ‑4.9 | 204 | intergenic (‑186/+35) | yhjJ/dctA | peptidase M16 family protein/C4 dicarboxylate/orotate:H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (98/104); total (99/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.00e-01 | |||||||||||
Only 100 of 206 total aligned reads displayed.
GTCAGTCTAAATGACGTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAAT > NC_000913/3681990‑3682262 | gTCAGTCTAAATGACGTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTc > 1:27475/1‑140 (MQ=255)gTCAGTCTAAATGACGTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTc < 2:1189382/140‑1 (MQ=255) gTCTAAATGACGTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCgggg > 1:1487521/1‑140 (MQ=255) tCTAAATGACGTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCg > 2:2260720/1‑136 (MQ=255) tCTAAATGACGTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGa > 1:164591/1‑140 (MQ=255) aaaTGACGTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAgg < 1:1147559/140‑1 (MQ=255) gACGTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGt < 1:1939408/140‑1 (MQ=255) gACGTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGt < 1:3157159/140‑1 (MQ=255) gTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTc < 1:1358661/125‑1 (MQ=255) gTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCg > 1:2437743/1‑140 (MQ=255) gTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCg > 2:2194659/1‑140 (MQ=255) gTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCg > 2:3109420/1‑140 (MQ=255) gTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACACACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCg > 2:1451379/1‑140 (MQ=255) aaaCACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCAt < 2:1654974/140‑1 (MQ=255) cacTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAgg < 1:2922594/125‑1 (MQ=255) ttCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAg > 1:1514772/1‑137 (MQ=255) tCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGtgat < 2:156950/140‑1 (MQ=255) tCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGtgat < 2:1349379/140‑1 (MQ=255) tCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGtgat > 1:1340606/1‑140 (MQ=255) cGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGt < 1:1097806/124‑1 (MQ=255) cGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGt > 2:1097806/1‑124 (MQ=255) cGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATaa < 2:3214845/134‑1 (MQ=255) cGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATaa > 1:3214845/1‑134 (MQ=255) cGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGtgatg < 2:2437743/140‑1 (MQ=255) gtgtTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGtgatg‑‑‑‑‑‑a > 2:933934/1‑140 (MQ=255) gtTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGtga > 1:116158/1‑135 (MQ=255) tAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGAtt < 2:2384743/140‑1 (MQ=255) aGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTa < 1:3223127/140‑1 (MQ=255) cAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGtgatg > 2:2559198/1‑128 (MQ=255) cAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGtgatg < 1:2559198/128‑1 (MQ=255) cAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGAt > 2:2428298/1‑132 (MQ=255) cAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGa > 2:2908381/1‑140 (MQ=255) cAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTAAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGa > 1:2162476/1‑140 (MQ=255) cATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTc > 2:1330527/1‑140 (MQ=255) aTGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCg > 2:1498515/1‑140 (MQ=255) aTGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCg < 2:397074/140‑1 (MQ=255) aaaTGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCg > 2:201425/1‑140 (MQ=255) cACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGc > 1:2836322/1‑140 (MQ=255) ggAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCAt > 1:165557/1‑140 (MQ=255) gaagaaGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATc < 2:1355723/140‑1 (MQ=255) gaagTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCgg < 2:1209969/140‑1 (MQ=255) gaagTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCgg < 1:2109912/140‑1 (MQ=255) agTGAAATAAATCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGgcg < 1:1750632/140‑1 (MQ=255) agTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGgcg < 2:2299655/140‑1 (MQ=255) agTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGgcg > 2:490750/1‑140 (MQ=255) agTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGgcg < 1:3104843/140‑1 (MQ=255) gAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCAc < 1:399751/140‑1 (MQ=255) aaTAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGa < 2:164591/140‑1 (MQ=255) aTAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATc > 2:326599/1‑129 (MQ=255) tAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGatt < 1:862351/140‑1 (MQ=255) ccTGAACTCACCCAGGTGGTAAGTTCGGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGa < 1:1390159/140‑1 (MQ=255) aCTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGgcg < 2:3059830/124‑1 (MQ=255) aCCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCg > 1:626277/1‑140 (MQ=255) aCCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCg > 1:3180949/1‑140 (MQ=255) ggtAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGttt > 2:1367459/1‑140 (MQ=255) tAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGttttt > 1:792525/1‑140 (MQ=255) tAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGttttt > 2:2820347/1‑140 (MQ=255) aGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTtg > 1:2067485/1‑140 (MQ=255) aGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTtg < 1:2347355/140‑1 (MQ=255) aGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTtg > 2:3013744/1‑140 (MQ=255) aGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTtg > 1:186176/1‑140 (MQ=255) aGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTtg > 2:1536894/1‑140 (MQ=255) cAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTcc < 1:3028301/127‑1 (MQ=255) cAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGt > 2:835502/1‑140 (MQ=255) cAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGt > 1:1250343/1‑140 (MQ=255) cAGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGt > 2:1790432/1‑140 (MQ=255) aGGCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTc < 1:2194659/140‑1 (MQ=255) gCACAGGGGTCAATTATGCGCAAACACTCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCa < 2:1446404/140‑1 (MQ=255) gCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTc > 1:1581035/1‑123 (MQ=255) gCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTtg < 2:1882837/133‑1 (MQ=255) gCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTtg < 1:1820881/133‑1 (MQ=255) gCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTc < 1:1447879/138‑1 (MQ=255) gCACAGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCa < 2:1377738/140‑1 (MQ=255) cacaGGGGTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAg < 2:626277/140‑1 (MQ=255) ggggTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCt > 2:3287090/1‑140 (MQ=255) ggggTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCt < 2:792525/140‑1 (MQ=255) ggggTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCt > 1:168325/1‑140 (MQ=255) gggTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCtt > 2:599988/1‑140 (MQ=255) gTCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTc > 2:2685769/1‑140 (MQ=255) tCAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCa < 2:1896593/140‑1 (MQ=255) cAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTtg > 1:48498/1‑123 (MQ=255) cAATTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCAc > 2:16127/1‑140 (MQ=255) aaTTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCAcc < 2:27475/140‑1 (MQ=255) aTTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCAccc < 1:974190/140‑1 (MQ=255) aTTATGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCAccc < 1:1896012/140‑1 (MQ=255) tGCGCAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCa < 1:3269926/124‑1 (MQ=255) gcgcAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTa > 2:2598200/1‑140 (MQ=255) cgcAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTTTTTCACCCACt < 2:1657026/137‑1 (MQ=255) cgcAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAg > 1:2417066/1‑140 (MQ=255) cgcAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAg > 2:2131195/1‑140 (MQ=255) cgcAAACACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAg > 1:2137327/1‑140 (MQ=255) aaaCACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCaa > 2:3433139/1‑140 (MQ=255) aaaCACCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCaa > 2:2162859/1‑140 (MQ=255) acacCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCAcc > 1:770221/1‑128 (MQ=255) acacCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCAcc < 2:770221/128‑1 (MQ=255) acacCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACg > 1:2262723/1‑140 (MQ=255) acacCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACg > 1:508711/1‑140 (MQ=255) acacCCGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACg > 1:2899939/1‑140 (MQ=255) cccGCGCTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACa < 1:3433139/140‑1 (MQ=255) cGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAAt > 1:2406598/1‑140 (MQ=255) | GTCAGTCTAAATGACGTTAAAAACACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATG‑‑‑‑‑‑AGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAAT > NC_000913/3681990‑3682262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |