BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,969,628	G→A	A200T (GCG→ACG)	wzzE →	enterobacterial common antigen polysaccharide co‑polymerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,969,628	0	G	A	100.0%	794.1 / NA	220	A200T (GCG→ACG)	wzzE	enterobacterial common antigen polysaccharide co‑polymerase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (104/116); total (104/116)

Only 100 of 220 total aligned reads displayed.

CGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCGACA  >  NC_000913/3969495‑3969762

cgcgGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTa                                                                                                                                  >  2:1434591/1‑140 (MQ=255)

cgcgGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTa                                                                                                                                  <  1:2223350/140‑1 (MQ=255)

cgcgGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTa                                                                                                                                  <  1:2183971/140‑1 (MQ=255)

cgcgGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTa                                                                                                                                  >  2:2223350/1‑140 (MQ=255)

cgcgGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTa                                                                                                                                  <  2:2873552/140‑1 (MQ=255)

  cgGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTAcc                                                                                                                                <  2:1459251/140‑1 (MQ=255)

     tCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATc                                                                                                                             <  1:2401758/140‑1 (MQ=255)

               cGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTa                                                                                                                                  >  1:1440824/1‑125 (MQ=255)

               cGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTAcc                                                                                                                                <  1:776154/127‑1 (MQ=255)

               cGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTAcc                                                                                                                                >  2:776154/1‑127 (MQ=255)

               cGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAg                                                                                                                   >  2:2371877/1‑140 (MQ=255)

               cGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAg                                                                                                                   >  2:1037330/1‑140 (MQ=255)

               cGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAg                                                                                                                   >  2:2601977/1‑140 (MQ=255)

               cGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAg                                                                                                                   >  2:690197/1‑140 (MQ=255)

               cGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAg                                                                                                                   >  1:123584/1‑140 (MQ=255)

                 tGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCt                                                                                                                 <  2:3315243/140‑1 (MQ=255)

                   aaGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCt                                                                                                                 <  1:2570818/138‑1 (MQ=255)

                   aaGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCa                                                                                                               >  2:3093203/1‑140 (MQ=255)

                   aaGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCa                                                                                                               >  2:1457021/1‑140 (MQ=255)

                   aaGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCa                                                                                                               >  2:626035/1‑140 (MQ=255)

                       ttATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTg                                                                                                           <  1:417589/140‑1 (MQ=255)

                       ttATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGAGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTg                                                                                                           <  1:1036145/140‑1 (MQ=255)

                         aTTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGaa                                                                                                         <  1:1434591/140‑1 (MQ=255)

                           tGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGc                                                                                                       <  2:1584092/140‑1 (MQ=255)

                           tGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGc                                                                                                       <  1:1481506/140‑1 (MQ=255)

                               gAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCa                                                                                                   >  2:2312087/1‑140 (MQ=255)

                                  aCCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGa                                                                                                <  1:3093203/140‑1 (MQ=255)

                                      cgcCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAagag                                                                                            >  2:2175991/1‑140 (MQ=255)

                                                taataaCCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAg                                                                                  <  1:1040502/140‑1 (MQ=255)

                                                 aataaCCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGc                                                                                 >  1:362591/1‑140 (MQ=255)

                                                          ttACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAg                                                                                  <  1:2066131/130‑1 (MQ=255)

                                                          ttACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGa                                                                        >  2:2921345/1‑140 (MQ=255)

                                                          ttACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGa                                                                        >  2:2226897/1‑140 (MQ=255)

                                                          ttACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGa                                                                        >  1:492887/1‑140 (MQ=255)

                                                            aCGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGAcc                                                                      >  2:200711/1‑140 (MQ=255)

                                                              gTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGAccgc                                                                    <  2:1291578/140‑1 (MQ=255)

                                                                 aGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCgg                                                                 <  1:2287465/140‑1 (MQ=255)

                                                                 aGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCgg                                                                 <  1:3373489/140‑1 (MQ=255)

                                                                  gTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGa                                                                >  2:579429/1‑140 (MQ=255)

                                                                   tATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGAt                                                               <  1:3448803/140‑1 (MQ=255)

                                                                    aTGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATg                                                              >  1:1157918/1‑140 (MQ=255)

                                                                      gTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGaa                                                            <  2:2555271/140‑1 (MQ=255)

                                                                      gTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGaa                                                            <  2:1930608/140‑1 (MQ=255)

                                                                      gTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGaa                                                            <  1:2601977/140‑1 (MQ=255)

                                                                      gTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGaa                                                            <  1:1649292/140‑1 (MQ=255)

                                                                        tGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACa                                                          <  1:323352/140‑1 (MQ=255)

                                                                        tGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACa                                                          >  2:1852959/1‑140 (MQ=255)

                                                                        tGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACa                                                          >  2:2288264/1‑140 (MQ=255)

                                                                        tGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCCGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACa                                                          >  1:3070982/1‑140 (MQ=255)

                                                                         gCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAg                                                         >  2:2340954/1‑140 (MQ=255)

                                                                         gCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAg                                                         >  1:2514419/1‑140 (MQ=255)

                                                                           ttttGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCa                                                       <  1:2304807/140‑1 (MQ=255)

                                                                             ttGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGaa                                                            >  2:1059059/1‑133 (MQ=255)

                                                                               gccagccaGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGa                                                   >  1:266096/1‑140 (MQ=255)

                                                                               gccagccaGCGTGCAGCCAGCCATCAGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGa                                                   >  1:1942852/1‑140 (MQ=255)

                                                                                ccagccagCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAg                                                  <  2:1688304/140‑1 (MQ=255)

                                                                                    ccagcGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAgg                                              >  2:1322654/1‑140 (MQ=255)

                                                                                      agcGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGgcg                                            <  2:3352944/140‑1 (MQ=255)

                                                                                        cGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCt                                          >  2:2392787/1‑140 (MQ=255)

                                                                                           gCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGaa                                       <  1:1457746/140‑1 (MQ=255)

                                                                                                  gccaTCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGgcg                                            <  2:3061844/128‑1 (MQ=255)

                                                                                                   ccaTCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTg                               <  1:2340954/140‑1 (MQ=255)

                                                                                                     aTCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGag                             <  1:1743321/140‑1 (MQ=255)

                                                                                                     aTCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGag                             <  1:1322654/140‑1 (MQ=255)

                                                                                                     aTCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGag                             <  2:41582/140‑1 (MQ=255)

                                                                                                     aTCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGag                             <  1:1923494/140‑1 (MQ=255)

                                                                                                     aTCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGag                             <  1:3276846/140‑1 (MQ=255)

                                                                                                     aTCTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGag                             <  1:593126/140‑1 (MQ=255)

                                                                                                       cTGATTGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGagca                           <  2:2473511/140‑1 (MQ=255)

                                                                                                       cTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGaa                                       >  2:3483527/1‑128 (MQ=255)

                                                                                                       cTGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTg                               <  1:2175546/136‑1 (MQ=255)

                                                                                                        tGAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGagcag                          >  1:971849/1‑140 (MQ=255)

                                                                                                         gAATGATGAGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGagcagc                         >  2:806918/1‑140 (MQ=255)

                                                                                                               tgaGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGag                             >  1:2689535/1‑130 (MQ=255)

                                                                                                               tgaGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGag                             <  2:2689535/130‑1 (MQ=255)

                                                                                                                gaGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAatat                  >  2:2575337/1‑140 (MQ=255)

                                                                                                                 aGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGagca                           <  2:3139042/130‑1 (MQ=255)

                                                                                                                 aGCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAgcagca                        <  1:138078/133‑1 (MQ=255)

                                                                                                                  gCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGag                             <  1:315735/127‑1 (MQ=255)

                                                                                                                  gCTGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATAttt                >  1:2389684/1‑140 (MQ=255)

                                                                                                                    tGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcg              >  2:1967986/1‑140 (MQ=255)

                                                                                                                    tGAAAGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcg              <  2:1271478/140‑1 (MQ=255)

                                                                                                                      aaaGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg            <  2:3158756/140‑1 (MQ=255)

                                                                                                                      aaaGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg            <  2:364331/140‑1 (MQ=255)

                                                                                                                      aaaGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg            <  1:398607/140‑1 (MQ=255)

                                                                                                                      aaaGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg            <  1:806918/140‑1 (MQ=255)

                                                                                                                      aaaGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg            >  2:188665/1‑140 (MQ=255)

                                                                                                                      aaaGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg            <  1:1853196/140‑1 (MQ=255)

                                                                                                                       aaagcgcATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCgcgc           >  2:2101510/4‑140 (MQ=255)

                                                                                                                        aGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg            <  1:2095114/138‑1 (MQ=255)

                                                                                                                        aGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg            >  2:2879178/1‑138 (MQ=255)

                                                                                                                        aGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg            >  2:2095114/1‑138 (MQ=255)

                                                                                                                        aGGCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTcgcg            <  1:2879178/138‑1 (MQ=255)

                                                                                                                         ggCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAg         <  2:397549/140‑1 (MQ=255)

                                                                                                                         ggCGCATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAg         <  1:2921345/140‑1 (MQ=255)

                                                                                                                             cATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCg     >  1:64120/1‑140 (MQ=255)

                                                                                                                             cATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCg     <  1:371235/140‑1 (MQ=255)

                                                                                                                             cATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCg     >  2:482075/1‑140 (MQ=255)

                                                                                                                             cATGGGCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCg     <  1:2966454/140‑1 (MQ=255)

                                                                                                                                gggCGACGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCGACa  <  2:3244433/140‑1 (MQ=255)

CGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCGACA  >  NC_000913/3969495‑3969762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`