BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	376,686	A→G	intergenic (+16/‑86)	mhpT → / → yaiL	3‑hydroxyphenylpropionate/3‑ hydroxycinnamate:H(+) symporter/DUF2058 domain‑containing protein YaiL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	376,686	0	A	G	100.0%	501.0 / NA	139	intergenic (+16/‑86)	mhpT/yaiL	3‑hydroxyphenylpropionate/3‑ hydroxycinnamate:H(+) symporter/DUF2058 domain‑containing protein YaiL
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (61/78); total (61/78)

Only 100 of 141 total aligned reads displayed.

AGGCACTGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCAGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCTCAAAGCAGGATTAGTCAC  >  NC_000913/376553‑376821

aGGCACTGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCg                                                                                                                                   <  2:608175/140‑1 (MQ=255)

aGGCACTGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCg                                                                                                                                   <  2:2692253/140‑1 (MQ=255)

 ggCACTGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGa                                                                                                                                  >  2:1159818/1‑140 (MQ=255)

  gCACTGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGaa                                                                                                                                 <  1:166603/140‑1 (MQ=255)

     cTGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAgg                                                                                                                              <  1:2500497/140‑1 (MQ=255)

     cTGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAgg                                                                                                                              <  2:2053183/140‑1 (MQ=255)

      tGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAggg                                                                                                                             >  2:1002200/1‑140 (MQ=255)

       ggCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGa                                                                                                                            >  1:1727171/1‑140 (MQ=255)

        gCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGAc                                                                                                                           <  1:1123751/140‑1 (MQ=255)

        gCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGAc                                                                                                                           >  2:3193145/1‑140 (MQ=255)

           cGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAgg                                                                                                                              <  1:2575643/134‑1 (MQ=255)

             gTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCAc                                                                                                                      <  2:2235564/140‑1 (MQ=255)

             gTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCAc                                                                                                                      <  1:3031574/140‑1 (MQ=255)

             gTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCAc                                                                                                                      <  2:1792596/140‑1 (MQ=255)

              tCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTcccc                                                                                                                     <  2:2687363/140‑1 (MQ=255)

              tCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCATGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCAcc                                                                                                                     <  2:3053313/140‑1 (MQ=255)

                  cGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCaa                                                                                                                 >  2:2233972/1‑140 (MQ=255)

                  cGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCaa                                                                                                                 <  2:503913/140‑1 (MQ=255)

                  cGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCaa                                                                                                                 <  1:985236/140‑1 (MQ=255)

                  cGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCaa                                                                                                                 <  1:653290/140‑1 (MQ=255)

                  cGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGGTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCaa                                                                                                                 >  2:2513597/1‑140 (MQ=255)

                       tGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATacac                                                                                                            >  2:948505/1‑140 (MQ=255)

                        ggCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACAcc                                                                                                           <  1:1159818/140‑1 (MQ=255)

                           cGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTAc                                                                                                        <  2:1642138/140‑1 (MQ=255)

                            gCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACg                                                                                                       <  1:1002200/140‑1 (MQ=255)

                            gCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACg                                                                                                       <  2:2151498/140‑1 (MQ=255)

                            gCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACg                                                                                                       >  2:1444434/1‑140 (MQ=255)

                            gCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACg                                                                                                       >  2:979235/1‑140 (MQ=255)

                            gCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACg                                                                                                       <  1:1933815/140‑1 (MQ=255)

                            gCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACg                                                                                                       <  1:1444434/140‑1 (MQ=255)

                               tCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCg                                                                                                    <  1:2233972/140‑1 (MQ=255)

                               tCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTATGATGAGCCGTAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCg                                                                                                    <  1:2044376/140‑1 (MQ=255)

                                 tGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGtt                                                                                                  <  1:2975195/140‑1 (MQ=255)

                                   cACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTa                                                                                                >  1:2636645/1‑140 (MQ=255)

                                        ggTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACg                                                                                                       >  2:1916134/1‑128 (MQ=255)

                                        ggTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACg                                                                                                       <  1:2492865/128‑1 (MQ=255)

                                        ggTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACg                                                                                                       <  1:1916134/128‑1 (MQ=255)

                                        ggTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCg                                                                                                    <  2:863165/131‑1 (MQ=255)

                                        ggTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCg                                                                                                    >  1:863165/1‑131 (MQ=255)

                                        ggTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGtt                                                                                                  <  2:282895/133‑1 (MQ=255)

                                        ggTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGtt                                                                                                  >  1:282895/1‑133 (MQ=255)

                                          tATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGtat                                                                                         >  2:1649343/1‑140 (MQ=255)

                                             tCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACt                                                                                      <  2:1015017/140‑1 (MQ=255)

                                               ttgttgCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCg                                                                                    <  1:2210749/140‑1 (MQ=255)

                                                 gttgCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCt                                                                                  <  1:1000377/140‑1 (MQ=255)

                                                  ttgCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGGCGTGCGCCGATGCTTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACAACTACGGCGGTTACAGGGATACTCGCTa                                                                                 >  2:1550448/1‑140 (MQ=255)

                                                  ttgCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTa                                                                                 >  1:613256/1‑140 (MQ=255)

                                                  ttgCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTa                                                                                 >  1:3099908/1‑140 (MQ=255)

                                                   tgCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTaa                                                                                >  1:2647828/1‑140 (MQ=255)

                                                    gCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTaaa                                                                               >  1:1424562/1‑140 (MQ=255)

                                                       gggTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAat                                                                            >  1:364063/1‑140 (MQ=255)

                                                       gggTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAat                                                                            >  2:179376/1‑140 (MQ=255)

                                                       gggTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAat                                                                            >  2:1466278/1‑140 (MQ=255)

                                                        ggTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAatt                                                                           >  2:3324262/1‑140 (MQ=255)

                                                             gCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCa                                                                      <  2:2636645/140‑1 (MQ=255)

                                                                gtgtTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCg                                                                   <  1:3434112/140‑1 (MQ=255)

                                                                  gtTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCggg                                                                 >  2:3162474/1‑140 (MQ=255)

                                                                   tttATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCt                                                                                  >  1:203066/1‑122 (MQ=255)

                                                                   tttATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCt                                                                                  <  2:203066/122‑1 (MQ=255)

                                                                     tATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGttt                                                              >  2:1064356/1‑140 (MQ=255)

                                                                      aTTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTCCGTTATTAGGCGGGGGCGAAAGCGGCTTCACCCCAATACACCTACTGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTg                                                             <  2:2580810/140‑1 (MQ=255)

                                                                           gatgaGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAAc                                                        >  1:3087549/1‑140 (MQ=255)

                                                                           gatgaGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAAc                                                        >  2:331669/1‑140 (MQ=255)

                                                                            atgaGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACa                                                       >  2:1566699/1‑140 (MQ=255)

                                                                             tgaGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACaa                                                      >  2:214345/1‑140 (MQ=255)

                                                                                 ccGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGAt                                                  >  2:2352337/1‑140 (MQ=255)

                                                                                  cGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATg                                                 <  1:3396629/140‑1 (MQ=255)

                                                                                   ggAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATgg                                                <  1:2497014/140‑1 (MQ=255)

                                                                                    gagaTCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGc                                               >  1:2345872/1‑140 (MQ=255)

                                                                                        tCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCaaaa                                           <  1:979235/140‑1 (MQ=255)

                                                                                         cACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAAc                                          >  1:2108045/1‑140 (MQ=255)

                                                                                          aCGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAAct                                         <  1:3193145/140‑1 (MQ=255)

                                                                                           cGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAActt                                        >  1:3263240/1‑140 (MQ=255)

                                                                                             aaTACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCTAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAActtac                                      <  2:3401017/140‑1 (MQ=255)

                                                                                               tACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAActtacct                                    <  1:317603/140‑1 (MQ=255)

                                                                                                 cAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAActtacctta                                  >  1:2709582/1‑140 (MQ=255)

                                                                                                 cAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAActtacctta                                  >  2:3137760/1‑140 (MQ=255)

                                                                                                   gCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACa                                <  2:2913795/140‑1 (MQ=255)

                                                                                                    ccGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAActta                                       >  2:3425291/1‑132 (MQ=255)

                                                                                                    ccGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAActta                                       <  1:3425291/132‑1 (MQ=255)

                                                                                                    ccGTGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACaa                               >  2:676609/1‑140 (MQ=255)

                                                                                                       tGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCa                                              <  1:2747458/122‑1 (MQ=255)

                                                                                                       tGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCa                                              >  2:2747458/1‑122 (MQ=255)

                                                                                                       tGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAagag                            <  1:245351/140‑1 (MQ=255)

                                                                                                       tGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAagag                            <  2:1143416/140‑1 (MQ=255)

                                                                                                       tGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAagag                            >  2:245351/1‑140 (MQ=255)

                                                                                                       tGCGCCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAagag                            <  2:364063/140‑1 (MQ=255)

                                                                                                         cgcCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCa                          >  2:2122881/1‑140 (MQ=255)

                                                                                                          gcCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAg                         <  1:1663351/140‑1 (MQ=255)

                                                                                                          gcCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAg                         <  2:2497375/140‑1 (MQ=255)

                                                                                                          gcCGATGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAg                         <  2:2345872/140‑1 (MQ=255)

                                                                                                               tGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCt                    <  2:3087549/140‑1 (MQ=255)

                                                                                                               tGCCTGACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCt                    <  1:676609/140‑1 (MQ=255)

                                                                                                                    gACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCTCAAAg               <  1:1550448/140‑1 (MQ=255)

                                                                                                                    gACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCTCAAAg               <  1:1064356/140‑1 (MQ=255)

                                                                                                                    gACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCTCAAAg               <  2:263871/140‑1 (MQ=255)

                                                                                                                    gACGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCTCAAAg               <  1:3324262/140‑1 (MQ=255)

                                                                                                                      cGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCt                    >  1:1303478/1‑133 (MQ=255)

                                                                                                                      cGTGCCTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCt                    <  2:1303478/133‑1 (MQ=255)

                                                                                                                          ccTTATTAGGCGGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCTCAAAGCAGGAt         >  1:1503987/1‑140 (MQ=255)

AGGCACTGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGACGTGCCTTATTAGGCAGGGGCGAAAGGGACTTCACCCCAATACACCTACGGCGTTTACAGGTATACTCGCTAAAAATTATTCAGCGGGTTTGGAAACAAAGATGGCAAAACTTACCTTACAAGAGCAGTTGCTCAAAGCAGGATTAGTCAC  >  NC_000913/376553‑376821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`