| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,249,344 | C→T | intergenic (+33/‑210) | lamB → / → malM | maltose outer membrane channel/phage lambda receptor protein/maltose regulon periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,249,344 | 0 | C | T | 99.4% | 569.5 / ‑4.8 | 161 | intergenic (+33/‑210) | lamB/malM | maltose outer membrane channel/phage lambda receptor protein/maltose regulon periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (69/91); total (69/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.92e-01 | |||||||||||
Only 100 of 167 total aligned reads displayed.
GCGAACTTCGGCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAA > NC_000913/4249207‑4249480 | gcgAACTTCGGCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTAcgtcg > 2:317054/1‑140 (MQ=255) gAACTTCGGCAAAGCCGGTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCa > 2:606920/1‑140 (MQ=255) aCTTCGGCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCAtt > 2:2383046/1‑140 (MQ=255) aCTTCGGCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCAtt > 2:2040174/1‑140 (MQ=255) aCTTCGGCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCAtt > 1:836948/1‑140 (MQ=255) tCGGCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCgg < 2:1673074/140‑1 (MQ=255) tCGGCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCgg < 1:2190152/140‑1 (MQ=255) ggCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGca < 2:1568832/140‑1 (MQ=255) aaaGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCTGATAAGGCGTTTACGTCGCATTCGGcaacc < 1:1987569/140‑1 (MQ=255) aaaGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGcaacc < 1:855211/140‑1 (MQ=255) aaGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATCCGGcaacag < 2:1561943/140‑3 (MQ=255) aGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGcaaccaa > 1:522435/1‑140 (MQ=255) gCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGcaaccaac < 2:3107979/140‑1 (MQ=255) ccGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTAcgtcg > 1:237544/1‑124 (MQ=255) ccGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGcaacc > 2:2903331/1‑136 (MQ=255) ccGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGcaacc < 1:2903331/136‑1 (MQ=255) ccTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGa > 1:2707605/1‑140 (MQ=255) tgctgATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATg < 1:2574456/140‑1 (MQ=255) gctgATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGc > 2:1449254/1‑140 (MQ=255) gctgATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGc > 2:1898898/1‑140 (MQ=255) ctgATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCg > 1:2236378/1‑140 (MQ=255) tgATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGa > 1:990364/1‑135 (MQ=255) gATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGAc < 1:1108160/140‑1 (MQ=255) ttCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACg < 1:1613248/126‑1 (MQ=255) ttCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACg > 2:1613248/1‑126 (MQ=255) ttCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCt > 1:1881964/1‑140 (MQ=255) ttCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCt > 2:729060/1‑140 (MQ=255) ttCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCt > 1:2792549/1‑140 (MQ=255) cAACGGCGGCTGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTg < 2:2658060/140‑1 (MQ=255) cAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTg < 2:1750987/140‑1 (MQ=255) ggcggcAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGcgcg < 2:1528818/140‑1 (MQ=255) aGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTAt < 1:965489/140‑1 (MQ=255) aGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTAt < 1:760425/140‑1 (MQ=255) aGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTAt < 1:2056182/140‑1 (MQ=255) aGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTAt < 1:1579191/140‑1 (MQ=255) aGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTAt < 1:1449254/140‑1 (MQ=255) aGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTAt < 1:606920/140‑1 (MQ=255) gCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATc < 1:3113828/140‑1 (MQ=255) gCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATc < 2:3155717/140‑1 (MQ=255) ttCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAg < 1:2040174/140‑1 (MQ=255) ttCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAg < 2:836948/140‑1 (MQ=255) tCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAgg < 1:2230493/140‑1 (MQ=255) tCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTa < 1:729060/140‑1 (MQ=255) tCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTa < 1:2447096/140‑1 (MQ=255) tGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTTGTCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACaa < 2:1118533/140‑1 (MQ=255) tGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACaa < 1:1153819/140‑1 (MQ=255) tGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACaa > 1:733015/1‑140 (MQ=255) tGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACaa < 2:2967729/140‑1 (MQ=255) gCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACg > 2:2479758/1‑140 (MQ=255) cGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACgg < 1:376241/140‑1 (MQ=255) cGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACgg < 1:2882103/140‑1 (MQ=255) cGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACgg < 2:3018735/140‑1 (MQ=255) gaGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATg < 1:2666583/140‑1 (MQ=255) gACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGc < 2:896470/140‑1 (MQ=255) tCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGAt < 1:1759618/140‑1 (MQ=255) tCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGAt < 2:522435/140‑1 (MQ=255) cGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCA‑GCCTACAACGGCTGTCAAATGTAgg < 2:2746550/132‑1 (MQ=255) gCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAAAGTAGGCCGGATAAGGc > 2:362808/1‑140 (MQ=255) cccAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCg > 2:1822453/1‑140 (MQ=255) aGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGttt < 2:1611199/140‑1 (MQ=255) gATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAg > 2:1426533/1‑123 (MQ=255) gATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAg < 1:1426533/123‑1 (MQ=255) aTGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTAc > 1:2518706/1‑140 (MQ=255) gAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTAcgcc < 2:733015/140‑1 (MQ=255) aaTCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTAcgccgc > 2:3255715/1‑140 (MQ=255) tggtggTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATcc > 2:1786099/1‑140 (MQ=255) tggtggTAATAGAAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATcc < 1:435897/140‑1 (MQ=255) ggtggtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCg > 1:3173586/1‑140 (MQ=255) ggtggtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCg > 2:2952543/1‑140 (MQ=255) ggtggtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCg > 2:1500803/1‑140 (MQ=255) ggtggtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTCACGCCGCATCCg > 1:1867853/1‑140 (MQ=255) gtggtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATcc < 1:1698126/138‑1 (MQ=255) gtggtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg > 1:116920/1‑140 (MQ=255) tggtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc < 2:3315591/140‑1 (MQ=255) tggtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc < 2:2856922/140‑1 (MQ=255) tggtAACAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc < 1:253018/140‑1 (MQ=255) gtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGttt < 2:1714351/124‑1 (MQ=255) gtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAt > 2:433331/1‑140 (MQ=255) aGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATaaaaa > 2:2399888/1‑140 (MQ=255) aGCAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATaaaaa > 1:3386360/1‑140 (MQ=255) cAAAACCTGGGCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACa > 1:3297177/1‑140 (MQ=255) gggCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa > 1:1740030/1‑124 (MQ=255) gggCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCa > 1:1664434/1‑140 (MQ=255) gggCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCa > 2:2560171/1‑140 (MQ=255) ggCCGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCAt > 1:918249/1‑140 (MQ=255) ccGGATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAAAGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTa < 1:362808/140‑1 (MQ=255) gATAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCt > 1:2958226/1‑140 (MQ=255) aTAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTg > 1:483315/1‑140 (MQ=255) aTAAGGCGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTg > 1:3120892/1‑140 (MQ=255) cGTTTACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAggg < 1:1786099/140‑1 (MQ=255) tttACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGc < 2:3173586/140‑1 (MQ=255) ttACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCa < 1:2552378/124‑1 (MQ=255) ttACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCa > 2:2552378/1‑124 (MQ=255) ttACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCg > 2:3340650/1‑140 (MQ=255) ttACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCg > 2:1717043/1‑140 (MQ=255) ttACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCg > 2:2063436/1‑140 (MQ=255) ttACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCg > 2:2272858/1‑140 (MQ=255) tACGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGa > 2:3082520/1‑140 (MQ=255) aCGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCgga < 1:2399888/140‑3 (MQ=255) aCGTCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGaa < 1:3255715/140‑1 (MQ=255) | GCGAACTTCGGCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAA > NC_000913/4249207‑4249480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |