BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,334,454	T→C	L379L (TTA→TTG)	eptA ←	phosphoethanolamine transferase EptA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,334,454	0	T	C	100.0%	961.7 / NA	264	L379L (TTA→TTG)	eptA	phosphoethanolamine transferase EptA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (126/138); total (126/138)

Only 100 of 266 total aligned reads displayed.

AGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGG  >  NC_000913/4334317‑4334589

aGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCaa                                                                                                                                       <  2:1027849/140‑1 (MQ=255)

 gCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAg                                                                                                                                      <  2:837420/140‑1 (MQ=255)

  cGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGa                                                                                                                                     >  1:2672595/1‑140 (MQ=255)

      ttgtCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAAt                                                                                                                                 <  1:1675765/140‑1 (MQ=255)

       tgtCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATc                                                                                                                                >  1:1111730/1‑140 (MQ=255)

        taccaaaGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCa                                                                                                                               >  2:977441/6‑140 (MQ=255)

        gtCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCa                                                                                                                               <  1:619136/140‑1 (MQ=255)

            tAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGcc                                                                                                                           >  1:3278577/1‑140 (MQ=255)

                tgtTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCa                                                                                                                       <  2:2672595/140‑1 (MQ=255)

                  ttCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCAcc                                                                                                                     >  1:229861/1‑140 (MQ=255)

                  ttCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCAcc                                                                                                                     <  1:164986/140‑1 (MQ=255)

                   tCACCAGTTGCTCTTTGGTACAGGTCTGTATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCt                                                                                                                    >  1:1972338/1‑140 (MQ=255)

                   tCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCt                                                                                                                    <  2:1632542/140‑1 (MQ=255)

                     aCCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTg                                                                                                                  <  1:418778/140‑1 (MQ=255)

                          ttGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGt                                                                                                             >  1:770178/1‑140 (MQ=255)

                            gCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCAt                                                                                                                         >  2:1925180/1‑126 (MQ=255)

                            gCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTa                                                                                                           >  2:2948022/1‑140 (MQ=255)

                            gCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTa                                                                                                           >  2:1091276/1‑140 (MQ=255)

                            gCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTa                                                                                                           >  1:1502322/1‑140 (MQ=255)

                            gCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTa                                                                                                           <  1:2473524/140‑1 (MQ=255)

                               ctTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTg                                                                                                        <  2:1502322/140‑1 (MQ=255)

                                  tGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATg                                                                                                     <  1:1894729/140‑1 (MQ=255)

                                   ggTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTA‑TGATGTa                                                                                                   <  1:3225226/140‑1 (MQ=255)

                                    gTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTa                                                                                                   <  1:454628/140‑1 (MQ=255)

                                    gTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTa                                                                                                   <  2:770178/140‑1 (MQ=255)

                                    gTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTa                                                                                                   <  2:3114409/140‑1 (MQ=255)

                                       cAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTa                                                                                                   <  2:2786230/137‑1 (MQ=255)

                                          gTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAGATTTCCTGAACTGAGGCTGATAGCGGTTGTCATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCTCCTTGCAGGTTATTGATGTACTCTTc                                                                                             <  2:3274227/140‑1 (MQ=255)

                                          gTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTg                                                                                                        >  2:111448/1‑129 (MQ=255)

                                          gTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTc                                                                                             <  2:1554969/140‑1 (MQ=255)

                                          gTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTAAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTc                                                                                             <  2:2969109/140‑1 (MQ=255)

                                            cTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCaa                                                                                           <  1:366701/140‑1 (MQ=255)

                                               gATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATg                                                                                                     <  1:2617283/127‑1 (MQ=255)

                                                 tctcATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCg                                                                                      <  1:2229522/140‑1 (MQ=255)

                                                 tctcATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCg                                                                                      <  2:2000424/140‑1 (MQ=255)

                                                    cATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCaa                                                                                           <  2:1853792/132‑1 (MQ=255)

                                                    cATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTgg                                                                                   >  2:63939/1‑140 (MQ=255)

                                                    cATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTgg                                                                                   >  1:1463465/1‑140 (MQ=255)

                                                    cATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTgg                                                                                   >  1:2160873/1‑140 (MQ=255)

                                                    cATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTgg                                                                                   >  1:1911555/1‑140 (MQ=255)

                                                    cATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTgg                                                                                   >  1:2495604/1‑140 (MQ=255)

                                                       tGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAAc                                                                                <  1:977441/140‑1 (MQ=255)

                                                         gtgtCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAg                                                                              >  1:1007899/1‑140 (MQ=255)

                                                          tgtCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGGTAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGc                                                                             >  2:1340115/1‑140 (MQ=255)

                                                          tgtCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGc                                                                             >  1:3307326/1‑140 (MQ=255)

                                                            tCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCAc                                                                           >  2:1378732/1‑140 (MQ=255)

                                                            tCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCAc                                                                           >  2:2303809/1‑140 (MQ=255)

                                                             cGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACt                                                                          <  2:1782337/140‑1 (MQ=255)

                                                              gCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACtt                                                                         >  1:885789/1‑140 (MQ=255)

                                                               cAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAg                                                                              >  2:1740842/1‑134 (MQ=255)

                                                                   ttGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCa                                                                    >  2:2894591/1‑140 (MQ=255)

                                                                   ttGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCa                                                                    >  2:2165612/1‑140 (MQ=255)

                                                                    tGGGGTAAATCTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGATATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCAt                                                                   >  2:570092/1‑140 (MQ=255)

                                                                       ggTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCAc                                                                           <  1:2769085/129‑1 (MQ=255)

                                                                          aaaTTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTACCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCAtt                                                             <  1:2115165/140‑1 (MQ=255)

                                                                           aaTTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTc                                                            <  1:708334/140‑1 (MQ=255)

                                                                            aTTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCAt                                                              >  2:1440615/1‑137 (MQ=255)

                                                                             tttCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGc                                                          <  1:2894591/140‑1 (MQ=255)

                                                                             tttCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGc                                                          <  2:2495604/140‑1 (MQ=255)

                                                                             tttCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGc                                                          <  1:998129/140‑1 (MQ=255)

                                                                             tttCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGc                                                          <  1:1378732/140‑1 (MQ=255)

                                                                               tCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCg                                                        <  2:885789/140‑1 (MQ=255)

                                                                               tCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCg                                                        <  1:3387865/140‑1 (MQ=255)

                                                                                ccTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGt                                                       <  1:3079441/140‑1 (MQ=255)

                                                                                      cTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGc                                                 <  1:1311562/140‑1 (MQ=255)

                                                                                      cTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGc                                                 <  2:491491/140‑1 (MQ=255)

                                                                                       tGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCa                                                <  1:796305/140‑1 (MQ=255)

                                                                                       tGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCa                                                <  2:2275717/140‑1 (MQ=255)

                                                                                        gAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCAc                                               <  1:192626/140‑1 (MQ=255)

                                                                                        gAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCAc                                               <  1:3445744/140‑1 (MQ=255)

                                                                                         aGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGGGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGc                                                          >  2:3391781/1‑128 (MQ=255)

                                                                                          ggCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTg                                             <  2:2040438/140‑1 (MQ=255)

                                                                                            cGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGAt                                           <  1:554978/140‑1 (MQ=255)

                                                                                            cGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGAt                                           <  1:2654698/140‑1 (MQ=255)

                                                                                            cGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGAt                                           <  2:3266719/140‑1 (MQ=255)

                                                                                                tAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAgg                                       <  1:1556867/140‑1 (MQ=255)

                                                                                                   cGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAg                                    >  1:20634/1‑140 (MQ=255)

                                                                                                     gTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGAt                                           >  2:1275084/1‑131 (MQ=255)

                                                                                                     gTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGAt                                           <  1:1275084/131‑1 (MQ=255)

                                                                                                     gTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGAt                                  >  2:363013/1‑140 (MQ=255)

                                                                                                      ttGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGAtt                                 <  1:3326186/140‑1 (MQ=255)

                                                                                                        gTAATAGGTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCa                               >  2:209651/1‑140 (MQ=255)

                                                                                                              ggTCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCgg                         >  1:1197142/1‑140 (MQ=255)

                                                                                                                tCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAgcg                            >  1:2966854/1‑135 (MQ=255)

                                                                                                                tCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTg                       <  2:1197142/140‑1 (MQ=255)

                                                                                                                tCGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTg                       >  2:534568/1‑140 (MQ=255)

                                                                                                                 cGGACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGa                      <  2:3307326/140‑1 (MQ=255)

                                                                                                                   gACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACg                    <  2:3351157/140‑1 (MQ=255)

                                                                                                                   gACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACg                    >  2:2719835/1‑140 (MQ=255)

                                                                                                                   gACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACg                    >  2:2136822/1‑140 (MQ=255)

                                                                                                                   gACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACg                    >  1:3203168/1‑140 (MQ=255)

                                                                                                                   gACCGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACg                    <  1:2948022/140‑1 (MQ=255)

                                                                                                                      cGTGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAgcg                            <  1:1361956/129‑1 (MQ=255)

                                                                                                                        tGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGa                      <  1:608342/133‑1 (MQ=255)

                                                                                                                        tGGCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGa                      >  2:608342/1‑133 (MQ=255)

                                                                                                                         ggCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTgg              >  2:195104/1‑140 (MQ=255)

                                                                                                                         ggCTGCCGATGGTGTGCAAGACAATCACGCCATCACCTTGAAGGTTATTGATGTACTCTTCACGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTg                       >  2:2223309/1‑131 (MQ=255)

                                                                                                                              ccGATGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAgg         >  1:1541921/1‑140 (MQ=255)

                                                                                                                                  tGGTGTGCAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCAcg     <  2:2564197/140‑1 (MQ=255)

                                                                                                                                     tgtgcAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCgg  <  1:1794638/140‑1 (MQ=255)

AGCGTGTTGTCGTAAGTGTTCACCAGTTGCTCTTTGGTACAGGTCTGGATCTCATTGGTGTCGCAGGTTGGGGTAAATTTCCTGAACTGAGGCGGATAGCGGTTGTAATAGGTCGGACCGTGGCTGCCGATGGTGTGTAAGACAATCACGCCATCACCTTGCAGGTTATTGATGTACTCTTCAAGCCCGTGGAACAGCACTTCGTCATAGCATTCGCCGTTGATGCACTGATCAGGTAGATTCAGCGCGGTGACGTTCTGGTGAGGCACGCGG  >  NC_000913/4334317‑4334589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`