BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,339,041	T→C	D494G (GAC→GGC)	adiA ←	arginine decarboxylase, degradative

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,339,041	0	T	C	100.0%	921.4 / NA	252	D494G (GAC→GGC)	adiA	arginine decarboxylase, degradative
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (125/127); total (125/127)

Only 100 of 253 total aligned reads displayed.

AAGGATGCTGACTTTAATCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGTCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCTTCGTCAATCACTTC  >  NC_000913/4338905‑4339177

 aGGATGCTGACTTTAATCGGGTCGAGCATACTCCAGTTATCCGGAGTATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATa                                                                                                                                      <  1:1908225/140‑1 (MQ=255)

 aGGATGCTGACTTTAATCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATa                                                                                                                                      >  2:1174640/1‑140 (MQ=255)

 aGGATGCTGACTTTAATCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATa                                                                                                                                      >  1:1814060/1‑140 (MQ=255)

       cTGACTTTAATCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGtttt                                                                                                                                >  2:1744524/1‑140 (MQ=255)

       cTGACTTTAATCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGtttt                                                                                                                                >  1:1951648/1‑140 (MQ=255)

         gACTTTAATCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGc                                                                                                                              <  1:1023103/140‑1 (MQ=255)

           cTTTAATCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCg                                                                                                                            >  2:2864487/1‑140 (MQ=255)

             ttAATCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGt                                                                                                                          <  2:2498729/140‑1 (MQ=255)

                aTCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTtg                                                                                                                       <  1:1835665/140‑1 (MQ=255)

                 tCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACACAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTtgt                                                                                                                      <  1:3216174/140‑1 (MQ=255)

                    ggTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTggg                                                                                                                   <  2:1480353/140‑1 (MQ=255)

                    ggTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTggg                                                                                                                   >  2:1813690/1‑140 (MQ=255)

                    ggTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTggg                                                                                                                   >  1:1772630/1‑140 (MQ=255)

                     gTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGt                                                                                                                  <  1:3329857/140‑1 (MQ=255)

                      tCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTc                                                                                                                 >  1:3471552/1‑140 (MQ=255)

                         aGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGt                                                                                                              >  1:2509888/1‑140 (MQ=255)

                         aGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGt                                                                                                              >  1:1689420/1‑140 (MQ=255)

                            aTACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGTAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTgac                                                                                                           <  1:1764655/140‑1 (MQ=255)

                            aTACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTgac                                                                                                           <  1:2578688/140‑1 (MQ=255)

                            aTACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTgac                                                                                                           <  2:2822684/140‑1 (MQ=255)

                              gcTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTgacga                                                                                                         <  2:2552001/139‑1 (MQ=255)

                              aCTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTgacga                                                                                                         <  1:2596141/140‑1 (MQ=255)

                                    gTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGTCGGTTTGTGGGTCGGTGACGActtctt                                                                                                   <  2:2918504/140‑1 (MQ=255)

                                    gTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGActtctt                                                                                                   >  2:2179675/1‑140 (MQ=255)

                                    gTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGActtctt                                                                                                   >  1:1743441/1‑140 (MQ=255)

                                        tCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTgac                                                                                                           >  1:493893/1‑128 (MQ=255)

                                        tCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGtt                                                                                               >  2:2699416/1‑140 (MQ=255)

                                        tCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGtt                                                                                               >  1:1700046/1‑140 (MQ=255)

                                         ccGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTc                                                                                              <  1:3383608/140‑1 (MQ=255)

                                          cGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTcc                                                                                             >  2:3357666/1‑140 (MQ=255)

                                          cGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTcc                                                                                             <  1:2699416/140‑1 (MQ=255)

                                          cGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTcc                                                                                             <  1:427605/140‑1 (MQ=255)

                                          cGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTcc                                                                                             >  2:3388510/1‑140 (MQ=255)

                                           ggAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCa                                                                                            <  1:1183085/140‑1 (MQ=255)

                                                  cTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTg                                                                                     >  2:2904740/1‑140 (MQ=255)

                                                  cTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTg                                                                                     >  2:964941/1‑140 (MQ=255)

                                                    ttGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGt                                                                                        <  1:1457524/135‑1 (MQ=255)

                                                      gAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTgaaga                                                                                 <  2:1951648/140‑1 (MQ=255)

                                                      gAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTgaaga                                                                                 >  1:2257825/1‑140 (MQ=255)

                                                        aGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAAc                                                                               <  1:668348/140‑1 (MQ=255)

                                                         gCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTGGGTGACGACTTCTTTGTTCCACGGTTTGAAGAAcc                                                                              >  1:2652562/1‑140 (MQ=255)

                                                           cGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAg                                                                            >  2:34575/1‑140 (MQ=255)

                                                           cGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAg                                                                            <  2:2257825/140‑1 (MQ=255)

                                                            gTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGc                                                                           >  2:2542591/1‑140 (MQ=255)

                                                             tGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCt                                                                          >  1:1000803/1‑140 (MQ=255)

                                                                  gCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGt                                                                     <  2:1772630/140‑1 (MQ=255)

                                                                    tttCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCa                                                                   <  2:1700046/140‑1 (MQ=255)

                                                                       cGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCg                                                                <  1:2917735/140‑1 (MQ=255)

                                                                        gCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCt                                                                          <  2:3280873/129‑1 (MQ=255)

                                                                         cccGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGt                                                              <  1:1541537/140‑1 (MQ=255)

                                                                          ccGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTg                                                             <  1:3357666/140‑1 (MQ=255)

                                                                          ccGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCAGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTg                                                             <  1:3244238/140‑1 (MQ=255)

                                                                           cGGATGCATTACCCAGCAGTCTTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGa                                                            <  1:3489163/140‑1 (MQ=255)

                                                                           cGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGa                                                            <  2:3136150/140‑1 (MQ=255)

                                                                           cGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGa                                                            <  2:2627402/140‑1 (MQ=255)

                                                                           cGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGa                                                            <  1:3088314/140‑1 (MQ=255)

                                                                           cGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGa                                                            <  2:2422127/140‑1 (MQ=255)

                                                                            ggATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGaa                                                           <  1:1416059/140‑1 (MQ=255)

                                                                            ggATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGaa                                                           <  2:465169/140‑1 (MQ=255)

                                                                            ggATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGaa                                                           <  2:766562/140‑1 (MQ=255)

                                                                              aTGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAAct                                                         <  1:2542591/140‑1 (MQ=255)

                                                                              aTGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAAct                                                         <  2:383379/140‑1 (MQ=255)

                                                                              aTGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAAct                                                         <  1:2824502/140‑1 (MQ=255)

                                                                              aTGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAAct                                                         <  1:2242191/140‑1 (MQ=255)

                                                                              aTGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAAct                                                         <  1:887275/140‑1 (MQ=255)

                                                                                   ttACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTta                                                    <  2:817958/140‑1 (MQ=255)

                                                                                      cccAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTGGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTtatat                                                 <  2:2652562/140‑1 (MQ=255)

                                                                                         agcagTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTGTATAGc                                              >  2:1629651/1‑140 (MQ=255)

                                                                                           cagTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGa                                                            <  1:391848/124‑1 (MQ=255)

                                                                                           cagTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCcg                                            >  2:2998844/1‑140 (MQ=255)

                                                                                              tCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGaa                                                           >  1:1570335/1‑122 (MQ=255)

                                                                                              tCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCgcgc                                         >  2:1548839/1‑140 (MQ=255)

                                                                                                cTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCa                                       >  2:2106009/1‑140 (MQ=255)

                                                                                                cTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCa                                       <  1:1124912/140‑1 (MQ=255)

                                                                                                        tggtCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGa                               >  2:394457/1‑140 (MQ=255)

                                                                                                        tggtCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGa                               >  2:1612560/1‑140 (MQ=255)

                                                                                                        tggtCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGa                               <  2:2075031/140‑1 (MQ=255)

                                                                                                        tggtCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGa                               >  1:180761/1‑140 (MQ=255)

                                                                                                        tggtCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGa                               >  2:1349631/1‑140 (MQ=255)

                                                                                                         ggtCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGAc                              <  1:2904740/140‑1 (MQ=255)

                                                                                                          gtCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGcc                                  <  1:794722/135‑1 (MQ=255)

                                                                                                           tCAGCAGTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACgg                            <  1:2668468/140‑1 (MQ=255)

                                                                                                               cagTTTGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAAt                        <  2:1934970/140‑1 (MQ=255)

                                                                                                                  tttGGTTGGTGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCaa                     >  2:645646/1‑140 (MQ=255)

                                                                                                                    tggttggtGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAAcc                   >  2:682028/1‑140 (MQ=255)

                                                                                                                    tggttggtGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAAcc                   >  2:1074136/1‑140 (MQ=255)

                                                                                                                    tggttggtGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAAcc                   >  2:3288281/1‑140 (MQ=255)

                                                                                                                    tggttggtGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAAcc                   >  1:2118436/1‑140 (MQ=255)

                                                                                                                       ttggtGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCt                >  2:443572/1‑140 (MQ=255)

                                                                                                                       ttggtGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCt                <  1:585996/140‑1 (MQ=255)

                                                                                                                         ggtGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGaa                          >  1:977579/1‑128 (MQ=255)

                                                                                                                         ggtGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTAAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCTTc              >  2:1872899/1‑140 (MQ=255)

                                                                                                                          gtGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCTTCg             >  2:424057/1‑140 (MQ=255)

                                                                                                                           tGCGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCTTCGt            <  2:2330218/140‑1 (MQ=255)

                                                                                                                             cGTCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCt                <  1:2049212/134‑1 (MQ=255)

                                                                                                                               tCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCTTCTTCAAt        <  1:339484/140‑1 (MQ=255)

                                                                                                                               tCAGCAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCTTCGTCAAt        <  1:208796/140‑1 (MQ=255)

                                                                                                                                   cAAAGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCTTCGTCAATCACt    <  1:645646/140‑1 (MQ=255)

                                                                                                                                    aaaGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCTTCGTCAATCACtt   >  2:1036170/1‑140 (MQ=255)

                                                                                                                                     aaGCCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCTTCGTCAATCACTTc  <  2:1862536/140‑1 (MQ=255)

AAGGATGCTGACTTTAATCGGGTCGAGCATACTCCAGTTATCCGGAATATCTTTGAAGCCGTGCCAGCTTTCGCCCGGATGCATTACCCAGCAGTCCTGAACGGTGGTCAGCAGTTTGGTTGGTGCGTCAGCAAAGTCATAGGTTTTGCCGGTTTGTGGGTCGGTGACGACTTCTTTGTTCCACGGTTTGAAGAACCAGCTACCGTCAGCGGTGAACTCTTTATATAGCCGCGCCATCGCCTGACGGAAATCAACCGCTTCGTCAATCACTTC  >  NC_000913/4338905‑4339177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`