BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	541,167	C→T	V201V (GTC→GTT)	ybbY →	putative purine transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	541,167	0	C	T	100.0%	469.8 / NA	130	V201V (GTC→GTT)	ybbY	putative purine transporter
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (69/61); total (69/61)

Only 100 of 131 total aligned reads displayed.

GCTGCCGTTTGGCATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTCGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGACGGCGGT  >  NC_000913/541032‑541301

gCTGCCGTTTGGCATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTTCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCa                                                                                                                                    >  2:97981/1‑140 (MQ=255)

gCTGCCGTTTGGCATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCa                                                                                                                                    >  2:724597/1‑140 (MQ=255)

 cTGCCGTTTGGCATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCAc                                                                                                                                   >  2:2806780/1‑140 (MQ=255)

   gCCGTTTGGCATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCa                                                                                                                                 >  2:115204/1‑140 (MQ=255)

   gCCGTTTGGCATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGGTCGCGCTCTCGGTGGCGGTGATGCGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCa                                                                                                                                 >  1:1062263/1‑140 (MQ=255)

      gTTTGGCATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATaa                                                                                                                              <  1:2806780/140‑1 (MQ=255)

         tGGCATAGCCGACCCGATTTTTAAATTTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCg                                                                                                                           <  1:2300270/140‑1 (MQ=255)

          ggCATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCgg                                                                                                                          >  2:3308884/1‑140 (MQ=255)

          ggCATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCgg                                                                                                                          <  1:2693713/140‑1 (MQ=255)

            cATGGCCGCCCCGAATTTTAAAATTCAG‑TTCCCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCt                                                                                                                        <  2:403135/140‑1 (MQ=255)

            cATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCt                                                                                                                        <  1:2817873/140‑1 (MQ=255)

               aGCCGACCCGAATTTAAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCgg                                                                                                                          <  1:2504282/135‑1 (MQ=255)

                 ccGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTgg                                                                                                                      >  2:1770461/1‑137 (MQ=255)

                 ccGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTgg                                                                                                                      <  1:1770461/137‑1 (MQ=255)

                 ccGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGgttg                                                                                                                   >  1:1923698/1‑140 (MQ=255)

                 ccGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGgttg                                                                                                                   <  1:2270817/140‑1 (MQ=255)

                  cgccccAAATTTAAAAATTCAG‑TTCCCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGgttgt                                                                                                                  <  2:2144551/137‑1 (MQ=255)

                    ccccGAA‑TTTAAAATTCTGTTTCCCGCCGTTCGCCCTCTCGGTGGCGGTGATGTGCCCGGTACTGGCGATGTTTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGttgttg                                                                                                                <  2:1062263/139‑1 (MQ=255)

                    aCCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGttgctg                                                                                                                >  1:1022566/1‑140 (MQ=255)

                     cccGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTtgttgt                                                                                                               >  1:1693334/1‑140 (MQ=255)

                     cccGAATTTTAAAACTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTtgttgt                                                                                                               >  2:782122/1‑140 (MQ=255)

                      ccGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCAGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTtgtg                                                                                                              <  2:1479215/140‑1 (MQ=255)

                          aTTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTAc                                                                                                          <  1:724597/140‑1 (MQ=255)

                            tttAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACtt                                                                                                        <  1:2562284/140‑1 (MQ=255)

                                         ttACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCcttc                                                                                            >  1:909521/1‑140 (MQ=255)

                                           cccgccgTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCcttctt                                                                                          <  1:1492089/139‑1 (MQ=255)

                                                 gTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACt                                                                                    >  2:834599/1‑140 (MQ=255)

                                                   tCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCg                                                                                  <  1:2634636/140‑1 (MQ=255)

                                                   tCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCg                                                                                  <  2:1923698/140‑1 (MQ=255)

                                                     gcgcTCTCGGTGGCGGTGATGTGCCTGGTAGTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGct                                                                                <  1:3014068/140‑1 (MQ=255)

                                                     gcgcTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGct                                                                                <  1:2265426/140‑1 (MQ=255)

                                                      cgcTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCg                                                                                        <  1:1991546/131‑1 (MQ=255)

                                                       gcTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGctct                                                                              <  1:115204/140‑1 (MQ=255)

                                                       gcTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGctct                                                                              >  1:421888/1‑140 (MQ=255)

                                                              gTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGa                                                                       <  1:2748206/140‑1 (MQ=255)

                                                               tGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAg                                                                      <  1:210714/140‑1 (MQ=255)

                                                                ggCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTTCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGt                                                                     <  1:97981/140‑1 (MQ=255)

                                                                ggCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGt                                                                     <  2:601268/140‑1 (MQ=255)

                                                                ggCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGt                                                                     <  2:734962/140‑1 (MQ=255)

                                                                   ggTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACt                                                                                    >  2:584380/1‑122 (MQ=255)

                                                                   ggTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACt                                                                                    <  1:584380/122‑1 (MQ=255)

                                                                    gTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCa                                                                 <  1:834599/140‑1 (MQ=255)

                                                                     tGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCAc                                                                >  2:2322796/1‑140 (MQ=255)

                                                                     tGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCAc                                                                >  1:1077508/1‑140 (MQ=255)

                                                                     tGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCAc                                                                >  2:274352/1‑140 (MQ=255)

                                                                      gATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACt                                                               <  1:526923/140‑1 (MQ=255)

                                                                       aTGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTg                                                              >  2:228795/1‑140 (MQ=255)

                                                                         gtgCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGc                                                            <  2:2912465/140‑1 (MQ=255)

                                                                          ggCCTGGTCCGGGCGTTGTTTATCTCCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGCCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCa                                                           <  2:3272292/139‑1 (MQ=255)

                                                                               ggTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGt                                                      >  2:1743766/1‑140 (MQ=255)

                                                                                 tACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTCTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTc                                                    <  2:2355295/140‑1 (MQ=255)

                                                                                  aCTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTcc                                                   >  1:2796947/1‑140 (MQ=255)

                                                                                    tGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCTGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCACACTCGCTCTCCGGTGAGTTGCACTGGCa                                                           >  2:2973052/1‑130 (MQ=255)

                                                                                    tGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCTGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCACACTCGCTCTCCGGTGAGTTGCACTGGCa                                                           <  1:2973052/130‑1 (MQ=255)

                                                                                      gCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCt                                               >  2:860246/1‑140 (MQ=255)

                                                                                         atgatTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCgg                                            >  1:941883/1‑140 (MQ=255)

                                                                                          tgatTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGc                                           >  2:287082/1‑140 (MQ=255)

                                                                                           gatTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCg                                                 <  2:3125837/133‑1 (MQ=255)

                                                                                           gatTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCg                                                 >  1:3125837/1‑133 (MQ=255)

                                                                                           gatTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCa                                          >  2:1131904/1‑140 (MQ=255)

                                                                                           gatTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCa                                          >  2:1322225/1‑140 (MQ=255)

                                                                                           gatTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCa                                          >  1:3483408/1‑140 (MQ=255)

                                                                                            atTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAg                                         <  2:27050/140‑1 (MQ=255)

                                                                                               aTCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTgg                                      <  1:860246/140‑1 (MQ=255)

                                                                                                    ccTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTg                                 >  1:2110818/1‑140 (MQ=255)

                                                                                                     cTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTgg                                >  2:2177262/1‑139 (MQ=255)

                                                                                                      tGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTggt                               >  2:2978407/1‑138 (MQ=255)

                                                                                                      tGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCt                               >  2:242698/1‑140 (MQ=255)

                                                                                                       gCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGcct                              >  2:2544192/1‑138 (MQ=255)

                                                                                                       gCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCtt                              >  1:48397/1‑140 (MQ=255)

                                                                                                       gCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCtt                              >  2:2867014/1‑140 (MQ=255)

                                                                                                       gCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCtt                              >  2:925739/1‑140 (MQ=255)

                                                                                                       gCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCtt                              >  2:1186869/1‑140 (MQ=255)

                                                                                                       gCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCtt                              >  2:2243139/1‑140 (MQ=255)

                                                                                                        ccGCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCttt                             >  1:2725551/1‑140 (MQ=255)

                                                                                                          gCAACGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGt                           >  1:309533/1‑140 (MQ=255)

                                                                                                            aaCGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCg                         >  1:3255892/1‑140 (MQ=255)

                                                                                                              cGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGcc                       <  1:2867014/140‑1 (MQ=255)

                                                                                                              cGTTTTGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGcc                       <  2:2290617/140‑1 (MQ=255)

                                                                                                                  ttGCCCGTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGGTTTTTTGCCgggg                   >  2:2724400/1‑139 (MQ=255)

                                                                                                                  agacaggTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGa                   <  1:196871/134‑1 (MQ=255)

                                                                                                                        gTTATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAattatt             <  1:333190/140‑1 (MQ=255)

                                                                                                                          tATGGCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCt           >  1:2705689/1‑140 (MQ=255)

                                                                                                                              gCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGAcg       <  2:847339/140‑1 (MQ=255)

                                                                                                                              gCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGAcg       <  1:9850/140‑1 (MQ=255)

                                                                                                                              gCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGAcg       <  2:2583366/140‑1 (MQ=255)

                                                                                                                              gCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGAcg       <  2:2389967/140‑1 (MQ=255)

                                                                                                                              gCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGAcg       <  1:2680033/140‑1 (MQ=255)

                                                                                                                              gCCTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGAcg       <  1:1186869/140‑1 (MQ=255)

                                                                                                                               ccTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGAcgg      <  2:3223611/140‑1 (MQ=255)

                                                                                                                               ccTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCGTTTTTGCCGGGGATTTTTTTTAcgg      >  2:1338992/1‑140 (MQ=255)

                                                                                                                               ccTGCTGGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCGTTTTCGCCTGGGATTATTTTGAcgg      >  2:1644497/1‑140 (MQ=255)

                                                                                                                                 tgctgGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGAcggcg    <  1:1322225/140‑1 (MQ=255)

                                                                                                                                 tgctgGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGAcggcg    <  1:735670/140‑1 (MQ=255)

                                                                                                                                  gctgGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGGTTTTTCTCCCGGGGTTGTTCTTGcggcgg   >  1:2919009/1‑140 (MQ=255)

                                                                                                                                   ctgGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGGTTTTTCGCCGGGGAGTATTTTTAcggcggg  >  2:2730026/1‑139 (MQ=255)

                                                                                                                                   ctgGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTTTTGCCGGGGATTATTTTTAcggcggg  >  1:130149/1‑139 (MQ=255)

                                                                                                                                   ctgGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGACGGCGGt  <  1:7174/140‑1 (MQ=255)

                                                                                                                                   ctgGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGACGGCGGt  <  2:2579595/140‑1 (MQ=255)

                                                                                                                                   ctgGTTGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGACGGCGGt  <  2:964316/140‑1 (MQ=255)

GCTGCCGTTTGGCATAGCCGACCCGAATTTTAAAATTCAG‑TTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTCGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGACGGCGGT  >  NC_000913/541032‑541301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`