BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	600,075	G→A	L454L (CTG→CTA)	cusA →	copper/silver export system RND permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	600,075	0	G	A	100.0%	641.4 / NA	177	L454L (CTG→CTA)	cusA	copper/silver export system RND permease
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (93/84); total (93/84)

Only 100 of 182 total aligned reads displayed.

GTCATGATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTGCTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGATCCCGATCC  >  NC_000913/599938‑600211

gTCATGATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTctact                                                                                                                                        >  1:1676906/1‑140 (MQ=255)

gTCATGATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTctact                                                                                                                                        <  1:985071/140‑1 (MQ=255)

gTCATGATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTctact                                                                                                                                        >  1:433658/1‑140 (MQ=255)

gTCATGATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTctact                                                                                                                                        >  1:698055/1‑140 (MQ=255)

  cATGATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGa                                                                                                                                      >  1:334435/1‑140 (MQ=255)

   aTGATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGAt                                                                                                                                     >  1:2927621/1‑140 (MQ=255)

     gATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTa                                                                                                                                   >  1:1033289/1‑140 (MQ=255)

          agaATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACg                                                                                                                              >  1:111227/1‑140 (MQ=255)

           gaATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGt                                                                                                                             >  2:640824/1‑140 (MQ=255)

           gaATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGt                                                                                                                             <  2:1676906/140‑1 (MQ=255)

            aaTGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGtt                                                                                                                            <  1:694184/140‑1 (MQ=255)

            aaTGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGtt                                                                                                                            <  1:1758930/140‑1 (MQ=255)

               gcgcATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCAGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTc                                                                                                                         >  2:1169246/1‑140 (MQ=255)

                cgcATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCa                                                                                                                                >  2:2890889/1‑132 (MQ=255)

                cgcATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCg                                                                                                                        >  1:1680671/1‑140 (MQ=255)

                 gcATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGt                                                                                                                       <  2:111227/140‑1 (MQ=255)

                  cATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGtt                                                                                                                      <  1:1936384/140‑1 (MQ=255)

                  cATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGtt                                                                                                                      <  2:1557985/140‑1 (MQ=255)

                     aaaCGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGtt                                                                                                                            >  1:3190821/1‑131 (MQ=255)

                     aaaCGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTAt                                                                                                                   >  1:1352988/1‑140 (MQ=255)

                      aaCGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATc                                                                                                                  <  2:1680671/140‑1 (MQ=255)

                      aaCGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATc                                                                                                                  <  2:1769901/140‑1 (MQ=255)

                        cGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATccc                                                                                                                >  1:1550596/1‑140 (MQ=255)

                            tGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATc                                                                                                            <  2:228556/140‑1 (MQ=255)

                              gAAGAGTGGCAGCACCAGCATCCAGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCtt                                                                                                          <  1:1169246/140‑1 (MQ=255)

                                 gagTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCAc                                                                                                       <  1:2719524/140‑1 (MQ=255)

                                    tGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCt                                                                                                    >  2:142440/1‑140 (MQ=255)

                                     ggCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTg                                                                                                   <  2:2459091/140‑1 (MQ=255)

                                          caCCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAgg                                                                                              >  2:693743/1‑140 (MQ=255)

                                            ccAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGc                                                                                            >  1:93960/1‑140 (MQ=255)

                                                  tCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAg                                                                                      <  2:311390/140‑1 (MQ=255)

                                                    cTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAggg                                                                                    <  2:93960/140‑1 (MQ=255)

                                                     tGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGc                                                                                   >  1:251893/1‑140 (MQ=255)

                                                       aCGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGt                                                                                 <  2:1352988/140‑1 (MQ=255)

                                                       aCGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGt                                                                                 <  1:912132/140‑1 (MQ=255)

                                                       aCGCCACGCTGGATAAT‑AAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAg                                                                                      >  1:199411/1‑134 (MQ=255)

                                                       aCGCCACGCTGGATAAT‑AAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAg                                                                                      <  2:199411/134‑1 (MQ=255)

                                                          ccACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCg                                                                                  >  1:3314206/1‑136 (MQ=255)

                                                          ccACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCg                                                                                  <  2:3314206/136‑1 (MQ=255)

                                                             cGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGttt                                                                           >  1:2136172/1‑140 (MQ=255)

                                                             cGCTGGATAATAAAACGCGCTGGCAGGGGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGttt                                                                           >  2:2657783/1‑140 (MQ=255)

                                                                       taaAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTgg                                                                 >  2:1971241/1‑140 (MQ=255)

                                                                           aCGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGtt                                                             <  2:433658/140‑1 (MQ=255)

                                                                            cgcgCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTc                                                            >  2:874734/1‑140 (MQ=255)

                                                                            cgcgCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTc                                                            >  1:1968754/1‑140 (MQ=255)

                                                                            cgcgCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTc                                                            >  2:1080762/1‑140 (MQ=255)

                                                                            cgcgCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTc                                                            >  1:2602477/1‑140 (MQ=255)

                                                                            cgcgCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTc                                                            >  1:1425288/1‑140 (MQ=255)

                                                                            cgcgCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTc                                                            >  2:3074494/1‑140 (MQ=255)

                                                                            cgcgCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTc                                                            >  2:768182/1‑140 (MQ=255)

                                                                            cgcgCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTc                                                            >  1:3471336/1‑140 (MQ=255)

                                                                                cTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCa                                                        <  2:1746659/140‑1 (MQ=255)

                                                                                  ggCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCaaa                                                      <  2:2559011/140‑1 (MQ=255)

                                                                                          aTCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGc                                              >  1:3037196/1‑140 (MQ=255)

                                                                                           tCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCg                                             <  2:2136172/140‑1 (MQ=255)

                                                                                             aCCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGAt                                           >  2:2929372/1‑140 (MQ=255)

                                                                                             aCCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGAt                                           >  2:1536093/1‑140 (MQ=255)

                                                                                             aCCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGAt                                           >  2:3372650/1‑140 (MQ=255)

                                                                                             aCCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGAt                                           >  2:3289187/1‑140 (MQ=255)

                                                                                             aCCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGAt                                           >  2:2464993/1‑140 (MQ=255)

                                                                                               cGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATgg                                         >  1:2894741/1‑140 (MQ=255)

                                                                                                gATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGc                                        <  1:2460379/140‑1 (MQ=255)

                                                                                                 aTGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCa                                                        >  2:1504072/1‑123 (MQ=255)

                                                                                                 aTGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCa                                                        <  1:1504072/123‑1 (MQ=255)

                                                                                                 aTGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGc                                        <  1:1860526/139‑1 (MQ=255)

                                                                                                 aTGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGc                                        >  2:1860526/1‑139 (MQ=255)

                                                                                                 aTGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCg                                       >  1:3145275/1‑140 (MQ=255)

                                                                                                 aTGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCg                                       >  1:85879/1‑140 (MQ=255)

                                                                                                   gCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCggg                                     >  2:2895053/1‑140 (MQ=255)

                                                                                                    cGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGt                                    >  1:1716408/1‑140 (MQ=255)

                                                                                                        tGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTgcgg                                <  2:3321655/140‑1 (MQ=255)

                                                                                                        tGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTgcgg                                <  2:23628/140‑1 (MQ=255)

                                                                                                        tGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTgcgg                                <  1:2908935/140‑1 (MQ=255)

                                                                                                         gTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTgcggc                               >  1:2173643/1‑140 (MQ=255)

                                                                                                         gTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTgcggc                               >  2:3185940/1‑140 (MQ=255)

                                                                                                         gTTGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTgcggc                               >  1:3274386/1‑140 (MQ=255)

                                                                                                          ttGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTgcggcg                              <  2:2828816/140‑1 (MQ=255)

                                                                                                          ttGAAGTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTgcggcg                              <  1:768182/140‑1 (MQ=255)

                                                                                                               gTGGGGCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCgctgct                         >  2:2389928/1‑140 (MQ=255)

                                                                                                                 ggggCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTgg                       <  1:1423798/140‑1 (MQ=255)

                                                                                                                    gCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTgg                       >  2:598922/1‑137 (MQ=255)

                                                                                                                    gCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTgg                       <  1:598922/137‑1 (MQ=255)

                                                                                                                    gCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGc                      >  1:2670574/1‑138 (MQ=255)

                                                                                                                    gCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGa                    <  2:3059475/140‑1 (MQ=255)

                                                                                                                    gCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGa                    >  2:2718604/1‑140 (MQ=255)

                                                                                                                    gCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGa                    >  1:2540264/1‑140 (MQ=255)

                                                                                                                    gCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGa                    <  1:3074494/140‑1 (MQ=255)

                                                                                                                    gCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGa                    >  2:3489623/1‑140 (MQ=255)

                                                                                                                    gCCGGCGCTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGa                    >  1:127152/1‑140 (MQ=255)

                                                                                                                        gcgcTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGt                >  1:500846/1‑140 (MQ=255)

                                                                                                                           cTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGt             <  1:3489623/140‑1 (MQ=255)

                                                                                                                           cTATTTATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGt             <  2:500846/140‑1 (MQ=255)

                                                                                                                                tATCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGATcc        <  2:127152/140‑1 (MQ=255)

                                                                                                                                  tCAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGATCCCg      <  2:2173643/140‑1 (MQ=255)

                                                                                                                                   cAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGAt          <  2:1352049/135‑1 (MQ=255)

                                                                                                                                   cAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGAt          >  1:1352049/1‑135 (MQ=255)

                                                                                                                                   cAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGATcc        >  2:1185043/1‑137 (MQ=255)

                                                                                                                                   cAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGATcc        <  1:1185043/137‑1 (MQ=255)

                                                                                                                                   cAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTCCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGATCCCGa     >  1:2997933/1‑140 (MQ=255)

                                                                                                                                   cAGTCTACTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTCCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGATCCCGa     <  2:2997933/140‑1 (MQ=255)

GTCATGATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTGCTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGATCCCGATCC  >  NC_000913/599938‑600211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`