BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,207,472	A→G	Y187C (TAC→TGC)	ymfQ →	e14 prophage; conserved protein YmfQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,207,472	0	A	G	100.0%	831.5 / NA	227	Y187C (TAC→TGC)	ymfQ	e14 prophage; conserved protein YmfQ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (112/115); total (112/115)

Only 100 of 229 total aligned reads displayed.

TTACTGGCAGGTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGAT  >  NC_000913/1207335‑1207608

ttACTGGCAGGTCAAAATGCCCGCCACCACCAACTCCCCCTGGGTGACATGTGGGGATCCCTGTGATTCCGCACTGCGTATCTGGGGGGACACCGTTGTCGAGGGTGTGCTTTACAAAATCTTCCCGTCGCATACCTGCg                                                                                                                                        >  2:1208955/1‑140 (MQ=255)

        aGGTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAAttttt                                                                                                                                >  1:465206/1‑140 (MQ=255)

        aGGTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAAttttt                                                                                                                                >  1:2615588/1‑140 (MQ=255)

        aGGTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAAttttt                                                                                                                                >  1:2860779/1‑140 (MQ=255)

        aGGTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAAttttt                                                                                                                                >  2:2659718/1‑140 (MQ=255)

          gTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTaa                                                                                                                              >  2:1308298/1‑140 (MQ=255)

          gTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTaa                                                                                                                              >  2:2861939/1‑140 (MQ=255)

          gTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTaa                                                                                                                              >  2:2048358/1‑140 (MQ=255)

          gTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTaa                                                                                                                              <  2:2700938/140‑1 (MQ=255)

          gTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTaa                                                                                                                              <  2:67137/140‑1 (MQ=255)

            cAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAat                                                                                                                            >  1:1248239/1‑140 (MQ=255)

              aCATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAatat                                                                                                                          <  2:233625/140‑1 (MQ=255)

              aCATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAatat                                                                                                                          <  1:1893155/140‑1 (MQ=255)

               cATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATc                                                                                                                         <  1:3388999/140‑1 (MQ=255)

                aTGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATcc                                                                                                                        >  1:2748590/1‑140 (MQ=255)

                 tGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCg                                                                                                                       <  2:76503/140‑1 (MQ=255)

                  gccagccaCCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCgg                                                                                                                      >  2:887602/1‑140 (MQ=255)

                   ccagccaCCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGa                                                                                                                     <  2:2615588/140‑1 (MQ=255)

                    cagccaCCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAg                                                                                                                    >  1:1465826/1‑140 (MQ=255)

                     agccaCCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGt                                                                                                                   <  2:465206/140‑1 (MQ=255)

                     agccaCCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGt                                                                                                                   <  2:1797131/140‑1 (MQ=255)

                       ccaccaccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTaa                                                                                                                 <  2:2748590/140‑1 (MQ=255)

                       ccaccaccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATC‑GGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAAt                                                                                                                >  2:1118312/1‑140 (MQ=255)

                        caccaccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAAt                                                                                                                >  2:2971233/1‑140 (MQ=255)

                        caccaccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAAt                                                                                                                <  1:1684916/140‑1 (MQ=255)

                         accaccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCg                                                                                                                       <  1:479034/132‑1 (MQ=255)

                         accaccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCg                                                                                                                       >  2:479034/1‑132 (MQ=255)

                         accaccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATc                                                                                                               >  2:640367/1‑140 (MQ=255)

                         accaccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATC‑GGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATcc                                                                                                              <  1:1118312/140‑1 (MQ=255)

                          ccaccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATcc                                                                                                              <  1:1004306/140‑1 (MQ=255)

                           caccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCa                                                                                                             >  1:2577087/1‑140 (MQ=255)

                           caccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCa                                                                                                             >  1:1081234/1‑140 (MQ=255)

                            accaACTCCACCTGGATGACATGTGGCGATCCCTGTTATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCAt                                                                                                            <  2:3267038/140‑1 (MQ=255)

                            accaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCAt                                                                                                            <  1:1413169/140‑1 (MQ=255)

                            accaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCAt                                                                                                            <  1:675841/140‑1 (MQ=255)

                             ccaACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATg                                                                                                           <  1:640367/140‑1 (MQ=255)

                              caACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGc                                                                                                          <  1:2191831/140‑1 (MQ=255)

                               aaCTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCa                                                                                                         <  2:1486111/140‑1 (MQ=255)

                               aaCTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCa                                                                                                         <  1:750735/140‑1 (MQ=255)

                               aaCTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCa                                                                                                         <  1:2440086/140‑1 (MQ=255)

                                aCTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCAt                                                                                                        <  2:3126635/140‑1 (MQ=255)

                                 cTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATc                                                                                                       >  1:426297/1‑140 (MQ=255)

                                  tCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCg                                                                                                      >  1:2498462/1‑140 (MQ=255)

                                     aCCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGt                                                                                                                   >  1:3403716/1‑124 (MQ=255)

                                      ccTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGtata                                                                                                  <  1:1303251/140‑1 (MQ=255)

                                                aTGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGaaaa                                                                                        >  1:2988874/1‑140 (MQ=255)

                                                aTGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGaaaa                                                                                        >  1:1662663/1‑140 (MQ=255)

                                                   tgGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACcg                                                                                     <  2:1081234/140‑1 (MQ=255)

                                                   tgGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACcg                                                                                     <  1:2024274/140‑1 (MQ=255)

                                                      cGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCgcgc                                                                                  <  2:426297/140‑1 (MQ=255)

                                                        aTCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAg                                                                                >  2:2641949/1‑140 (MQ=255)

                                                        aTCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAg                                                                                >  1:562101/1‑140 (MQ=255)

                                                        aTCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAg                                                                                <  1:2133080/140‑1 (MQ=255)

                                                         tCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGa                                                                               <  1:2659718/140‑1 (MQ=255)

                                                         tCCCTGTGATTCCGCACTGCGTATCTGGGGCGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGa                                                                               >  2:1573528/1‑140 (MQ=255)

                                                            cTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAgg                                                                            <  1:887602/140‑1 (MQ=255)

                                                             tgtgATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGa                                                                           >  1:3153309/1‑140 (MQ=255)

                                                             tgtgATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGa                                                                           >  1:3265298/1‑140 (MQ=255)

                                                                gATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATaa                                                                        >  1:1022489/1‑140 (MQ=255)

                                                                   tCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGtt                                                                     >  1:1070498/1‑140 (MQ=255)

                                                                   tCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGtt                                                                     <  1:2641949/140‑1 (MQ=255)

                                                                       cACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGgc                                                                 >  1:1885053/1‑140 (MQ=255)

                                                                       cACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGgc                                                                 >  2:3403335/1‑140 (MQ=255)

                                                                       cACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGgc                                                                 >  2:3036467/1‑140 (MQ=255)

                                                                        aCTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGgcg                                                                <  1:336527/140‑1 (MQ=255)

                                                                            cGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCggg                                                            >  2:1452796/1‑140 (MQ=255)

                                                                                 cTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGa                                                       <  2:2555678/140‑1 (MQ=255)

                                                                                    gggTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCTGAAGGATAAGTTCGgcg                                                                <  2:532453/128‑1 (MQ=255)

                                                                                    gggTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACg                                                    <  1:849646/140‑1 (MQ=255)

                                                                                      gTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGgcg                                                                <  2:2760404/126‑1 (MQ=255)

                                                                                      gTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGgcg                                                                >  1:2760404/1‑126 (MQ=255)

                                                                                      gTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGgcg                                                                >  2:2144646/1‑126 (MQ=255)

                                                                                          cacCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTa                                              >  1:2934852/1‑140 (MQ=255)

                                                                                           acCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTAc                                             >  1:2339121/1‑140 (MQ=255)

                                                                                              gTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCg                                          <  2:2815996/140‑1 (MQ=255)

                                                                                              gTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCg                                          >  1:840417/1‑140 (MQ=255)

                                                                                               ttGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAACTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGt                                         >  2:34480/1‑140 (MQ=255)

                                                                                                 gTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACATGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTgg                                       >  1:1781365/1‑140 (MQ=255)

                                                                                                   cGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTa                                     <  2:846858/140‑1 (MQ=255)

                                                                                                   cGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTa                                     <  2:706316/140‑1 (MQ=255)

                                                                                                   cGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTGCGTAACTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTa                                     <  1:34480/140‑1 (MQ=255)

                                                                                                       tgtgtgCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAAccc                                 >  1:2405728/1‑140 (MQ=255)

                                                                                                         tgtgCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGt                                      <  1:2227177/133‑1 (MQ=255)

                                                                                                         tgtgCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGt                                      >  2:2227177/1‑133 (MQ=255)

                                                                                                         tgtgCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAAccccc                               >  2:1639199/1‑140 (MQ=255)

                                                                                                           tgCTTAACAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTAc                                             <  1:1554838/124‑1 (MQ=255)

                                                                                                                 aCAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGc                       <  2:2341747/140‑1 (MQ=255)

                                                                                                                 aCAAACTCTGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGc                       <  2:338055/140‑1 (MQ=255)

                                                                                                                      ctctGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGcc                  <  2:1070498/140‑1 (MQ=255)

                                                                                                                       tctGCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCt                 >  1:2810077/1‑140 (MQ=255)

                                                                                                                          gCCCGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGcc              >  1:3028038/1‑140 (MQ=255)

                                                                                                                           cccGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCa             <  1:1367568/140‑1 (MQ=255)

                                                                                                                           cccGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCa             <  2:1885053/140‑1 (MQ=255)

                                                                                                                            ccGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCAc            <  2:1266604/140‑1 (MQ=255)

                                                                                                                             cGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCAcc           <  2:1015581/140‑1 (MQ=255)

                                                                                                                             cGTCGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCAcc           >  1:3209104/1‑140 (MQ=255)

                                                                                                                                cGCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGAt        <  2:1930242/140‑1 (MQ=255)

                                                                                                                                 gCATACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACATGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATc       <  2:1781365/140‑1 (MQ=255)

                                                                                                                                   aTACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTg     <  2:3264086/140‑1 (MQ=255)

                                                                                                                                    tACCTGCGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTgg    <  2:1732660/140‑1 (MQ=255)

TTACTGGCAGGTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGAT  >  NC_000913/1207335‑1207608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`