BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,275,844	A→G	V592A (GTC→GCC)	narX ←	sensory histidine kinase NarX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,275,844	0	A	G	100.0%	848.3 / NA	233	V592A (GTC→GCC)	narX	sensory histidine kinase NarX
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (108/125); total (108/125)

Only 100 of 236 total aligned reads displayed.

GCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGCCGTAGTGATTGCTGCG  >  NC_000913/1275707‑1275980

  cATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTc                                                                                                                                      >  1:742758/1‑140 (MQ=255)

       cTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGa                                                                                                                                 >  2:68636/1‑140 (MQ=255)

            ttCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGtt                                                                                                                            <  1:388241/140‑1 (MQ=255)

            ttCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGtt                                                                                                                            >  1:1900926/1‑140 (MQ=255)

                 cAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTc                                                                                                                       <  1:3083939/140‑1 (MQ=255)

                 cAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTc                                                                                                                       <  2:22064/140‑1 (MQ=255)

                 cAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTc                                                                                                                       <  1:1523242/140‑1 (MQ=255)

                 cAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTc                                                                                                                       <  2:1900926/140‑1 (MQ=255)

                  aaCCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCg                                                                                                                      >  1:344067/1‑140 (MQ=255)

                         gTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATaa                                                                                                               <  1:2549770/140‑1 (MQ=255)

                             tatCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGt                                                                                                           <  2:1187277/140‑1 (MQ=255)

                                  ggTGCCATCCTGATATGCTGTTTTGCGCCAGTTTGCAGCATCTGGTGATCGTGAATCAGCAGAATAGTGGGCGGTTCCTGATCACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTACGGGAATAAAGGTGcccc                                                                                                      >  2:52968/1‑139 (MQ=255)

                                  ggTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGacca                                                                                                      >  2:32895/1‑140 (MQ=255)

                                  ggTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGacca                                                                                                      >  1:1561892/1‑140 (MQ=255)

                                  ggTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGCCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGacca                                                                                                      >  1:2078490/1‑140 (MQ=255)

                                    tGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGaccacc                                                                                                    >  1:1782242/1‑140 (MQ=255)

                                    tGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGaccacc                                                                                                    >  2:1225651/1‑140 (MQ=255)

                                    tGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGaccacc                                                                                                    >  2:1389577/1‑140 (MQ=255)

                                      ccATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACcaccac                                                                                                  >  2:3385335/1‑140 (MQ=255)

                                      ccATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACcaccac                                                                                                  >  1:239430/1‑140 (MQ=255)

                                      ccATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACcaccac                                                                                                  >  1:1386723/1‑140 (MQ=255)

                                       cATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACt                                                                                                 <  2:239430/140‑1 (MQ=255)

                                       cATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACt                                                                                                 <  2:1782242/140‑1 (MQ=255)

                                            tGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGt                                                                                            <  2:2154973/140‑1 (MQ=255)

                                             gATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTg                                                                                           <  2:1303108/140‑1 (MQ=255)

                                              aTAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGc                                                                                          >  1:3237129/1‑140 (MQ=255)

                                                aaGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCa                                                                                        <  2:269827/140‑1 (MQ=255)

                                                      ttttACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGAt                                                                                  >  1:2639202/1‑140 (MQ=255)

                                                      ttttACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGAt                                                                                  >  1:1604168/1‑140 (MQ=255)

                                                        ttACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGcc                                                                                         <  1:1865073/131‑1 (MQ=255)

                                                        ttACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTc                                                                                >  2:181608/1‑140 (MQ=255)

                                                                gTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGAcggc                                                                        >  2:3335749/1‑140 (MQ=255)

                                                                gTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGAcggc                                                                        >  1:2379786/1‑140 (MQ=255)

                                                                gTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGAcggc                                                                        >  1:1799410/1‑140 (MQ=255)

                                                                gTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGAcggc                                                                        >  2:1947465/1‑140 (MQ=255)

                                                                    gcagcaTCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGAc                                                                    <  2:344067/140‑1 (MQ=255)

                                                                      agcaTCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGAcgc                                                                  >  2:256196/1‑140 (MQ=255)

                                                                             ggTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATc                                                           <  1:1689552/140‑1 (MQ=255)

                                                                             ggTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATc                                                           >  2:824290/1‑140 (MQ=255)

                                                                             ggTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATc                                                           >  1:2890683/1‑140 (MQ=255)

                                                                             ggTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATc                                                           >  1:2483764/1‑140 (MQ=255)

                                                                               tGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGc                                                         <  1:824290/140‑1 (MQ=255)

                                                                                  tCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTc                                                      >  2:2734829/1‑140 (MQ=255)

                                                                                    gTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGt                                                    >  2:235227/1‑140 (MQ=255)

                                                                                         tCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACt                                               <  1:1147726/140‑1 (MQ=255)

                                                                                         tCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACt                                               <  2:2078490/140‑1 (MQ=255)

                                                                                         tCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACt                                               <  1:952733/140‑1 (MQ=255)

                                                                                         tCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACt                                               <  1:480368/140‑1 (MQ=255)

                                                                                         tCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACt                                               <  2:3237129/140‑1 (MQ=255)

                                                                                         tCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACt                                               >  2:690529/1‑140 (MQ=255)

                                                                                         tCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACt                                               <  1:2944551/140‑1 (MQ=255)

                                                                                              agGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTgcg                                          >  1:2819227/1‑140 (MQ=255)

                                                                                                gATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACt                                               >  2:633673/1‑133 (MQ=255)

                                                                                                gATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACt                                               <  1:633673/133‑1 (MQ=255)

                                                                                                gATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCa                                        <  2:1604168/140‑1 (MQ=255)

                                                                                                gATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCa                                        <  1:1219768/140‑1 (MQ=255)

                                                                                                  tagtagCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACg                                      <  2:742758/140‑1 (MQ=255)

                                                                                                     tagCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATc                                   >  2:2586231/1‑140 (MQ=255)

                                                                                                      agCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcg                                  <  2:208335/140‑1 (MQ=255)

                                                                                                      agCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcg                                  <  2:2792938/140‑1 (MQ=255)

                                                                                                      agCCGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcg                                  <  1:235227/140‑1 (MQ=255)

                                                                                                       gCCTGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCTCCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGGGCACGATcgc                                 <  2:1888056/140‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  2:2181606/140‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  1:690529/140‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  1:1947465/140‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  1:2653947/140‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  1:2866738/140‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  1:3335749/140‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  2:3007609/140‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  2:2890683/140‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  2:28419/140‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgc                                 <  2:885983/139‑1 (MQ=255)

                                                                                                        ccGGTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgc                                 >  1:885983/1‑139 (MQ=255)

                                                                                                          ggTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGa                                     <  1:1248733/133‑1 (MQ=255)

                                                                                                          ggTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGa                                     <  1:2838779/133‑1 (MQ=255)

                                                                                                          ggTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGa                                     >  2:1248733/1‑133 (MQ=255)

                                                                                                          ggTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  2:1682658/138‑1 (MQ=255)

                                                                                                          ggTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                >  1:1069200/1‑138 (MQ=255)

                                                                                                          ggTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCa                              >  1:1752751/1‑140 (MQ=255)

                                                                                                          ggTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCa                              >  1:2784938/1‑140 (MQ=255)

                                                                                                           gTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCat                             <  2:1109950/140‑1 (MQ=255)

                                                                                                           gTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCat                             <  2:348942/140‑1 (MQ=255)

                                                                                                           gTTCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAAT‑AAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCatt                            <  1:257233/140‑1 (MQ=255)

                                                                                                            ttCCTGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcg                                  >  1:576856/1‑134 (MQ=255)

                                                                                                                tGATTACTCATTGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCAttatta                        <  1:2244465/140‑1 (MQ=255)

                                                                                                                tGATTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCAttatta                        <  2:1579456/140‑1 (MQ=255)

                                                                                                                  aTTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATc                      <  2:1472191/140‑1 (MQ=255)

                                                                                                                  aTTACTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATc                      <  1:32895/140‑1 (MQ=255)

                                                                                                                     aCTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATg                   <  2:2639202/140‑1 (MQ=255)

                                                                                                                     aCTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATg                   <  2:558456/140‑1 (MQ=255)

                                                                                                                      cTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATcgcg                                <  1:1324348/126‑1 (MQ=255)

                                                                                                                      cTCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGc                  >  2:1343232/1‑140 (MQ=255)

                                                                                                                       tCATGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGcc                 <  2:2832741/140‑1 (MQ=255)

                                                                                                                         aTGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGCCGt               <  1:3361782/140‑1 (MQ=255)

                                                                                                                          tGGGTATCTCCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGCCGTa              <  1:2094249/140‑1 (MQ=255)

                                                                                                                                tctcCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGcc                 >  1:2760355/1‑131 (MQ=255)

                                                                                                                                tctcCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGCCGTAGTGa          >  2:1771626/1‑138 (MQ=255)

                                                                                                                                tctcCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGCCGTAGTGAtt        >  2:1005514/1‑140 (MQ=255)

                                                                                                                                 ctcCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGCCGTAGTGATtg       <  2:250004/140‑1 (MQ=255)

                                                                                                                                 ctcCTTGGGCGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGCCGTAGTGATtg       >  1:610118/1‑140 (MQ=255)

GCCATTACTCGCTTCGCCAACCACGGTGATATCTGGTGCCATACTGATAAGCTGTTTTACGCCAGTTCGCAGCATCGGGTGATCGTCAATCAGCAGGATAGTAGCCGGTTCCTGATTACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGACGCGGCAATCGCCTCGTAAACTTTGCGCACGATCGCGCATTATTATCATGCCGTAGTGATTGCTGCG  >  NC_000913/1275707‑1275980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`