BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,320,377	C→T	S336S (TCG→TCA)	trpD ←	anthranilate synthase subunit TrpD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,320,377	0	C	T	100.0%	538.5 / NA	153	S336S (TCG→TCA)	trpD	anthranilate synthase subunit TrpD
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (80/73); total (80/73)

Only 100 of 157 total aligned reads displayed.

TCAATGGCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGCGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGG  >  NC_000913/1320247‑1320513

tCAATGGCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCg                                                                                                                                 <  2:2069001/140‑1 (MQ=255)

 cAATGGCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCgg                                                                                                                                <  1:1225537/140‑1 (MQ=255)

   aTGGCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCg                                                                                                                              <  2:2712958/140‑1 (MQ=255)

    tGGCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCg                                                                                                                                 >  1:36462/1‑136 (MQ=255)

    tGGCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCg                                                                                                                                 <  2:36462/136‑1 (MQ=255)

    tGGCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGt                                                                                                                             >  2:1736663/1‑140 (MQ=255)

      gCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTc                                                                                                                           >  1:290773/1‑140 (MQ=255)

      gCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTc                                                                                                                           >  1:155345/1‑140 (MQ=255)

      gCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGCGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTc                                                                                                                           >  2:1494630/1‑140 (MQ=255)

           aGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATc                                                                                                                      <  1:3242637/140‑1 (MQ=255)

           aGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATc                                                                                                                      <  1:1388549/140‑1 (MQ=255)

           aGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTCGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATc                                                                                                                      <  2:1451380/140‑1 (MQ=255)

                aTTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCata                                                                                                                        >  2:1499625/1‑133 (MQ=255)

                aTTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGAt                                                                                                                 <  1:288130/140‑1 (MQ=255)

                aTTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGAt                                                                                                                 >  2:1817373/1‑140 (MQ=255)

                         ggTGCGGGTTTTTAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCAGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGa                                                                                                        >  1:2644847/1‑140 (MQ=255)

                         ggTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATc                                                                                                                      <  1:2473615/126‑1 (MQ=255)

                         ggTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATc                                                                                                                      >  2:2473615/1‑126 (MQ=255)

                         ggTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGa                                                                                                        >  2:976288/1‑140 (MQ=255)

                         ggTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGa                                                                                                        >  2:1531387/1‑140 (MQ=255)

                          gTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGTGTTCATATCAAGATTAATACCGaa                                                                                                       <  1:3318583/140‑1 (MQ=255)

                           tGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTATCTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAAc                                                                                                      >  1:2040014/1‑140 (MQ=255)

                           tGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAAc                                                                                                      >  1:470654/1‑140 (MQ=255)

                           tGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAAc                                                                                                      >  2:3361442/1‑140 (MQ=255)

                           tGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAAc                                                                                                      >  1:3265560/1‑140 (MQ=255)

                            gCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATTGGCGTTCATATCAAGATTAATACCGAAcg                                                                                                     >  1:157571/1‑140 (MQ=255)

                            gCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAAcg                                                                                                     >  2:1116290/1‑140 (MQ=255)

                              gggTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAAcgcc                                                                                                   >  2:2390568/1‑140 (MQ=255)

                              gggTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAAcgcc                                                                                                   <  1:846645/140‑1 (MQ=255)

                              gggTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAAcgcc                                                                                                   >  2:1908059/1‑140 (MQ=255)

                                 ttttCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACgccgcc                                                                                                <  2:290773/140‑1 (MQ=255)

                                   ttCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCcag                                                                                              >  1:2852613/1‑140 (MQ=255)

                                   ttCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCcag                                                                                              >  2:1138417/1‑140 (MQ=255)

                                   ttCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCcag                                                                                              >  1:1112924/1‑140 (MQ=255)

                                   ttCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCcag                                                                                              >  1:1662241/1‑140 (MQ=255)

                                    tCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCcagc                                                                                             >  1:3229340/1‑140 (MQ=255)

                                       gTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGa                                                                                          <  1:2365176/140‑1 (MQ=255)

                                       gTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCAGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGa                                                                                          <  2:2644847/140‑1 (MQ=255)

                                          gCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCg                                                                                       >  1:522282/1‑140 (MQ=255)

                                          gCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCg                                                                                       >  2:3397964/1‑140 (MQ=255)

                                            tGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGa                                                                                     >  1:1616741/1‑140 (MQ=255)

                                            tGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGa                                                                                     <  1:1138417/140‑1 (MQ=255)

                                               cGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGa                                                                                  <  1:1531387/140‑1 (MQ=255)

                                                gAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGaa                                                                                 <  2:1662241/140‑1 (MQ=255)

                                                 aaCCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAAc                                                                                <  1:3397964/140‑1 (MQ=255)

                                                  aCCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAAcc                                                                               <  2:470654/140‑1 (MQ=255)

                                                  aCCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAAcc                                                                               <  1:2390568/140‑1 (MQ=255)

                                                  aCCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAAcc                                                                               <  2:145430/140‑1 (MQ=255)

                                                    cGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAg                                                                             <  2:3229340/140‑1 (MQ=255)

                                                     ggCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGa                                                                            >  1:1397284/1‑140 (MQ=255)

                                                            cgTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGAt                                                                           >  1:1724122/1‑134 (MQ=255)

                                                            cgTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGAt                                                                           <  2:1724122/134‑1 (MQ=255)

                                                             gTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTgg                                                                    <  1:1817373/140‑1 (MQ=255)

                                                              tGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAg                                                                             >  2:784651/1‑130 (MQ=255)

                                                              tGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGga                                                                   <  1:1421630/140‑1 (MQ=255)

                                                                gCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGgaga                                                                 >  2:404624/1‑140 (MQ=255)

                                                                gCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGgaga                                                                 >  2:1875927/1‑140 (MQ=255)

                                                                   gAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGc                                                              <  2:3147278/140‑1 (MQ=255)

                                                                     aTCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTa                                                            <  1:1494630/140‑1 (MQ=255)

                                                                        cGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACgg                                                         <  2:854863/140‑1 (MQ=255)

                                                                        cGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACgg                                                         <  1:3361442/140‑1 (MQ=255)

                                                                           tgtgATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTgg                                                                    <  1:2267162/126‑1 (MQ=255)

                                                                           tgtgATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTgg                                                                    >  2:2267162/1‑126 (MQ=255)

                                                                             tgATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGcc                                                    <  1:1863834/140‑1 (MQ=255)

                                                                                    tCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTc                                             <  1:1908059/140‑1 (MQ=255)

                                                                                     cGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCg                                            <  1:967167/140‑1 (MQ=255)

                                                                                     cGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCg                                            >  2:561285/1‑140 (MQ=255)

                                                                                     cGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCg                                            >  2:678770/1‑140 (MQ=255)

                                                                                      ggCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGc                                           <  1:1433499/140‑1 (MQ=255)

                                                                                       gcgcAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGcc                                          >  2:2069164/1‑140 (MQ=255)

                                                                                       gcgcAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGcc                                          <  1:561285/140‑1 (MQ=255)

                                                                                            aaGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACttt                                     <  1:1787923/140‑1 (MQ=255)

                                                                                            aaGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACttt                                     >  2:804778/1‑140 (MQ=255)

                                                                                              gagGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCa                                   <  2:3269862/140‑1 (MQ=255)

                                                                                              gagGAAACATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCACCACTTTCa                                   <  2:1659337/140‑1 (MQ=255)

                                                                                                   aaCATACACCTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCca                              <  2:2853180/140‑1 (MQ=255)

                                                                                                           ccTAACTCATCCAGCGCCTGGCGTGATTTATTGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAG‑CCACAGGCcgcg                     <  2:157571/140‑1 (MQ=255)

                                                                                                            cTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCcgcg                     >  2:3129435/1‑140 (MQ=255)

                                                                                                            cTAACTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCcgcg                     >  1:815329/1‑140 (MQ=255)

                                                                                                               aCTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCcgcg                     >  1:1713793/1‑137 (MQ=255)

                                                                                                               aCTCATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCgcggcg                  <  2:2803531/140‑1 (MQ=255)

                                                                                                                  cATCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCcg                       <  2:897793/132‑1 (MQ=255)

                                                                                                                    tCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACaaa             >  1:755671/1‑140 (MQ=255)

                                                                                                                    tCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACaaa             >  2:1611360/1‑140 (MQ=255)

                                                                                                                    tCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACaaa             >  1:343242/1‑140 (MQ=255)

                                                                                                                    tCCAGCGCCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACaaa             >  2:758242/1‑140 (MQ=255)

                                                                                                                        gcgcCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCa         <  1:77192/140‑1 (MQ=255)

                                                                                                                          gcCTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACt       <  2:521052/140‑1 (MQ=255)

                                                                                                                           ccTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTg      >  1:363880/1‑140 (MQ=255)

                                                                                                                           ccTGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTg      <  1:1875927/140‑1 (MQ=255)

                                                                                                                             tGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCa         <  2:3347998/135‑1 (MQ=255)

                                                                                                                             tGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCa         >  1:3347998/1‑135 (MQ=255)

                                                                                                                             tGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGc    <  1:3228205/140‑1 (MQ=255)

                                                                                                                             tGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGc    <  2:3234865/140‑1 (MQ=255)

                                                                                                                             tGGCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGc    <  2:2320234/140‑1 (MQ=255)

                                                                                                                              ggCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg   >  2:3445121/1‑140 (MQ=255)

                                                                                                                              ggCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg   >  2:3045760/1‑140 (MQ=255)

                                                                                                                              ggCGTGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg   >  1:1113340/1‑140 (MQ=255)

                                                                                                                               gcgtGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCgg  <  1:1611360/140‑1 (MQ=255)

                                                                                                                               gcgtGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCgg  >  1:1524930/1‑140 (MQ=255)

TCAATGGCCCCAGCACATTGAACAGGGTGCGGGTTTTCAGTTGCTGGCGAACCGGCATCGCGTGGCGGAATCCGGTGTGATACTTCGGCGCAAAGAGGAAACATACACCTAACTCATCCAGCGCCTGGCGCGATTTATCGGCGTTCATATCAAGATTAATACCGAACGCCGCCAGCAGATCGGACGAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGG  >  NC_000913/1320247‑1320513

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`