BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,334,023	A→G	T57A (ACG→GCG)	cysB →	DNA‑binding transcriptional dual regulator CysB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,334,023	0	A	G	100.0%	831.1 / NA	228	T57A (ACG→GCG)	cysB	DNA‑binding transcriptional dual regulator CysB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (122/106); total (122/106)

Only 100 of 230 total aligned reads displayed.

GTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATA  >  NC_000913/1333888‑1334158

gtggtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCa                                                                                                                                     >  1:496474/1‑140 (MQ=255)

gtggtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCa                                                                                                                                     >  1:1903057/1‑140 (MQ=255)

  ggtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAgg                                                                                                                                   >  1:1094948/1‑140 (MQ=255)

  ggtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAgg                                                                                                                                   >  1:2952310/1‑140 (MQ=255)

  ggtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAgg                                                                                                                                   >  2:3300249/1‑140 (MQ=255)

   gtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGt                                                                                                                                  >  2:2107972/1‑140 (MQ=255)

   gtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGt                                                                                                                                  >  2:178901/1‑140 (MQ=255)

   gtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGt                                                                                                                                  >  2:1641045/1‑140 (MQ=255)

   gtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGt                                                                                                                                  <  2:2952310/140‑1 (MQ=255)

   gtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGt                                                                                                                                  >  1:999243/1‑140 (MQ=255)

   gtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGt                                                                                                                                  <  2:398646/140‑1 (MQ=255)

   gtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGt                                                                                                                                  >  1:398646/1‑140 (MQ=255)

   gtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTAAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGt                                                                                                                                  >  1:3470918/1‑140 (MQ=255)

           tAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCcag                                                                                                                          <  2:1520702/140‑1 (MQ=255)

            aaCCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCcagc                                                                                                                         <  1:147544/140‑1 (MQ=255)

            aaCCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCcagc                                                                                                                         <  2:1390070/140‑1 (MQ=255)

             aCCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCcagca                                                                                                                        >  1:2839959/1‑140 (MQ=255)

               cTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAgg                                                                                                                      <  2:496474/140‑1 (MQ=255)

                 gAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGc                                                                                                                    <  1:3375065/140‑1 (MQ=255)

                  aaTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCa                                                                                                                   >  1:3351633/1‑140 (MQ=255)

                  aaTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCa                                                                                                                   >  2:1361193/1‑140 (MQ=255)

                  aaTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCa                                                                                                                   >  2:2474181/1‑140 (MQ=255)

                  aaTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCa                                                                                                                   >  1:2444609/1‑140 (MQ=255)

                   aTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCaa                                                                                                                  >  1:2909572/1‑140 (MQ=255)

                      tctcATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGaa                                                                                                               <  1:2474181/140‑1 (MQ=255)

                         catcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAaata                                                                                                            >  1:606406/1‑140 (MQ=255)

                            caACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAAtt                                                                                                         >  2:2533523/1‑140 (MQ=255)

                               cAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGaa                                                                                                               >  2:3199964/1‑131 (MQ=255)

                               cAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGaa                                                                                                               <  1:3199964/131‑1 (MQ=255)

                                aGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAGTTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTa                                                                                                     >  2:2353831/1‑140 (MQ=255)

                                aGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTa                                                                                                     >  1:540247/1‑140 (MQ=255)

                                    gAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTAt                                                                                                    >  2:3080472/1‑137 (MQ=255)

                                         aCTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTcgcg                                                                                            <  2:2444609/140‑1 (MQ=255)

                                         aCTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTcgcg                                                                                            <  1:2107972/140‑1 (MQ=255)

                                              acacATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTc                                                                                       <  2:2542602/140‑1 (MQ=255)

                                              acacATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTc                                                                                       <  1:2262982/140‑1 (MQ=255)

                                              acacATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTc                                                                                       <  1:1270288/140‑1 (MQ=255)

                                                  aTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGt                                                                                   >  1:2297462/1‑140 (MQ=255)

                                                   tCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTc                                                                                  >  2:795653/1‑140 (MQ=255)

                                                    cacaACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCg                                                                                 >  2:2828034/1‑140 (MQ=255)

                                                       aaCCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGaaa                                                                              >  1:2983394/1‑140 (MQ=255)

                                                       aaCCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGaaa                                                                              >  1:17445/1‑140 (MQ=255)

                                                              gATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATg                                                                       <  1:3010182/140‑1 (MQ=255)

                                                              gATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATg                                                                       >  2:3411187/1‑140 (MQ=255)

                                                              gATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATg                                                                       >  2:563504/1‑140 (MQ=255)

                                                                   gTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGcc                                                                     <  2:1061132/137‑1 (MQ=255)

                                                                   gTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGcc                                                                     >  1:1061132/1‑137 (MQ=255)

                                                                   gTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATa                                                                  >  1:951362/1‑140 (MQ=255)

                                                                   gTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATa                                                                  >  1:458956/1‑140 (MQ=255)

                                                                           gTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGt                                                          >  2:2623431/1‑140 (MQ=255)

                                                                           gTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGt                                                          >  2:119265/1‑140 (MQ=255)

                                                                           gTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGt                                                          >  1:2993516/1‑140 (MQ=255)

                                                                           gTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGt                                                          >  1:2516632/1‑140 (MQ=255)

                                                                           gTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGt                                                          <  1:2533523/140‑1 (MQ=255)

                                                                            tCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGtt                                                         >  2:733797/1‑140 (MQ=255)

                                                                             cAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTg                                                        <  1:1361193/140‑1 (MQ=255)

                                                                              aGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGc                                                       >  1:702450/1‑140 (MQ=255)

                                                                              aGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGc                                                       >  1:1388848/1‑140 (MQ=255)

                                                                              aGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGCCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGc                                                       >  2:3325362/1‑140 (MQ=255)

                                                                                aaTGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTgacg                                                     <  1:3107634/140‑4 (MQ=255)

                                                                                aaTGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCg                                                     <  1:168117/140‑1 (MQ=255)

                                                                                aaTGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCg                                                     <  2:2893848/140‑1 (MQ=255)

                                                                                aaTGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCg                                                     <  2:627195/140‑1 (MQ=255)

                                                                                aaTGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCg                                                     <  1:329518/140‑1 (MQ=255)

                                                                                aaTGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCg                                                     <  2:959094/140‑1 (MQ=255)

                                                                                     tGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGc                                                       <  1:1161033/133‑1 (MQ=255)

                                                                                     tGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGc                                                       >  2:1161033/1‑133 (MQ=255)

                                                                                     tGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCg                                                     <  2:1103981/135‑1 (MQ=255)

                                                                                     tGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGagag                                                <  2:2775155/140‑1 (MQ=255)

                                                                                     tGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGagag                                                <  1:1612326/140‑1 (MQ=255)

                                                                                     tGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGagag                                                <  1:2772292/140‑1 (MQ=255)

                                                                                       gAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGca                                              >  1:3311101/1‑140 (MQ=255)

                                                                                         aGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGcaca                                            <  1:264149/140‑1 (MQ=255)

                                                                                          gACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCacac                                           <  1:178901/140‑1 (MQ=255)

                                                                                            cGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCg                                                     <  1:1846844/128‑1 (MQ=255)

                                                                                            cGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCt                                         >  2:2208308/1‑140 (MQ=255)

                                                                                            cGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCt                                         >  2:863282/1‑140 (MQ=255)

                                                                                             gAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCg                                                     <  1:2597773/127‑1 (MQ=255)

                                                                                              aGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTgg                                       >  2:1245352/1‑140 (MQ=255)

                                                                                                 tAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGagag                                                >  2:1882068/1‑128 (MQ=255)

                                                                                                 tAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGagag                                                <  1:1882068/128‑1 (MQ=255)

                                                                                                 tAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCg                                    <  2:1903057/140‑1 (MQ=255)

                                                                                                  aGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCgg                                   >  1:268451/1‑140 (MQ=255)

                                                                                                   ggCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGa                                  <  1:795653/140‑1 (MQ=255)

                                                                                                     gagacagaTTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCGCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATa                                <  2:2031844/133‑1 (MQ=255)

                                                                                                     cATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATa                                >  2:926989/1‑140 (MQ=255)

                                                                                                      aTTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATaa                               <  2:458956/140‑1 (MQ=255)

                                                                                                      aTTCAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATaa                               <  2:17445/140‑1 (MQ=255)

                                                                                                         cAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAgg                            >  1:1773782/1‑140 (MQ=255)

                                                                                                         cAAATTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAgg                            >  2:2918545/1‑140 (MQ=255)

                                                                                                          aaaTTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGt                           <  1:1505654/140‑1 (MQ=255)

                                                                                                          aaaTTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGt                           <  2:1836651/140‑1 (MQ=255)

                                                                                                           agttttttCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGtt                          <  1:2353831/138‑1 (MQ=255)

                                                                                                           aaTTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCTGGAGAGCACACCTGGCCGGATAAAGGtt                          <  2:2516632/140‑1 (MQ=255)

                                                                                                           aaTTTTTTCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGtt                          <  2:2297462/140‑1 (MQ=255)

                                                                                                             ttttttCCCGGAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCa                        <  2:3006751/140‑1 (MQ=255)

                                                                                                              tttttCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCAc                       <  2:2988480/140‑1 (MQ=255)

                                                                                                                 ttCCCGAAGCGGCAAGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGt                    <  1:116336/140‑1 (MQ=255)

                                                                                                                               aGCACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACg      <  1:2164196/140‑1 (MQ=255)

                                                                                                                                 cACCTGGCGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCa    <  2:2167504/140‑1 (MQ=255)

GTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATA  >  NC_000913/1333888‑1334158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`