BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,740,176	T→C	L89P (CTG→CCG)	ydhC →	putative transporter YdhC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,740,176	0	T	C	100.0%	506.7 / NA	140	L89P (CTG→CCG)	ydhC	putative transporter YdhC
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (70/70); total (70/70)

Only 100 of 143 total aligned reads displayed.

CAGTGCCAGCCTTAGTCTGTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTGCGG  >  NC_000913/1740039‑1740310

cAGTGCCAGCCTTAGTCTGTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCcgt                                                                                                                                      >  1:1662455/1‑140 (MQ=255)

          cTTAGTCTGTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGaaaa                                                                                                                            <  1:1815756/140‑1 (MQ=255)

          cTTAGTCTGTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGaaaa                                                                                                                            <  1:1595113/140‑1 (MQ=255)

             aGTCTGTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAAcgc                                                                                                                         >  1:104676/1‑140 (MQ=255)

             aGTCTGTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAAcgc                                                                                                                         >  2:3330365/1‑140 (MQ=255)

                  gTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTa                                                                                                                    <  2:701012/140‑1 (MQ=255)

                   ttCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTTGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTAc                                                                                                                   >  2:103279/1‑140 (MQ=255)

                   ttCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTa                                                                                                                    <  2:2452290/139‑1 (MQ=255)

                   ttCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTa                                                                                                                    >  1:2452290/1‑139 (MQ=255)

                   ttCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTAc                                                                                                                   >  2:940999/1‑140 (MQ=255)

                   ttCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTAc                                                                                                                   >  2:2545274/1‑140 (MQ=255)

                   ttCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTAc                                                                                                                   >  1:3044955/1‑140 (MQ=255)

                   ttCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTAc                                                                                                                   >  1:2632691/1‑140 (MQ=255)

                   ttCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTAc                                                                                                                   <  1:2545274/140‑1 (MQ=255)

                    tCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTa                                                                                                                                 <  1:3476325/125‑1 (MQ=255)

                    tCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCt                                                                                                                     <  2:916085/137‑1 (MQ=255)

                    tCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCt                                                                                                                     >  1:916085/1‑137 (MQ=255)

                    tCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTa                                                                                                                    >  2:2293906/1‑138 (MQ=255)

                     ccTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACgc                                                                                                                 <  1:509276/140‑1 (MQ=255)

                     ccTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACgc                                                                                                                 >  2:1827231/1‑140 (MQ=255)

                        tGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACgctgc                                                                                                              >  2:3407155/1‑140 (MQ=255)

                        tGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACgctgc                                                                                                              >  2:3398257/1‑140 (MQ=255)

                        tGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACgctgc                                                                                                              >  1:1398157/1‑140 (MQ=255)

                        tGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACgctgc                                                                                                              >  1:1198197/1‑140 (MQ=255)

                        tGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTATCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACgctgc                                                                                                              >  1:1508909/1‑140 (MQ=255)

                         gCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACgctgct                                                                                                             >  1:3153037/1‑140 (MQ=255)

                         gCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACgctgct                                                                                                             >  1:1360320/1‑140 (MQ=255)

                             gTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTa                                                                                                         >  1:2296003/1‑140 (MQ=255)

                               tttGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTAtt                                                                                                       <  1:3398257/140‑1 (MQ=255)

                               tttGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTAtt                                                                                                       <  1:2744708/140‑1 (MQ=255)

                               tttGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTAtt                                                                                                       <  1:1444931/140‑1 (MQ=255)

                                   ccGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGt                                                                                                   <  2:3064489/140‑1 (MQ=255)

                                    cGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGTGTCGAAAACGCCGCTACGCTGCGGGTATCGCGtt                                                                                                  <  2:645132/140‑1 (MQ=255)

                                        gCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGt                                                                                              >  1:2062658/1‑140 (MQ=255)

                                         cccAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTa                                                                                             <  2:579037/140‑1 (MQ=255)

                                         cccAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTa                                                                                             <  2:2062658/140‑1 (MQ=255)

                                         cccAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTa                                                                                             <  1:3312235/140‑1 (MQ=255)

                                         cccAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTa                                                                                             <  1:1827231/140‑1 (MQ=255)

                                         cccAGCTTCTGTGGGGGCCGCTATCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTa                                                                                             <  2:1508909/140‑1 (MQ=255)

                                           cAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACa                                                                                           <  2:1683922/140‑1 (MQ=255)

                                           cAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACa                                                                                           <  1:2394644/140‑1 (MQ=255)

                                             gCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAgg                                                                                         <  1:3330365/140‑1 (MQ=255)

                                             gCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAgg                                                                                         <  2:3320330/140‑1 (MQ=255)

                                             gCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAgg                                                                                         <  2:3153037/140‑1 (MQ=255)

                                                   gtgGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTgg                                                                                   >  1:3287369/1‑140 (MQ=255)

                                                   gtgGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACACTGCTGGTATTGCGTTTTGTACa                                                                                           >  1:696344/1‑132 (MQ=255)

                                                    tgGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTa                                                                                             >  2:1114479/1‑129 (MQ=255)

                                                       gggCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGgtgt                                                                               <  1:105061/140‑1 (MQ=255)

                                                       gggCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGgtgt                                                                               >  2:105061/1‑140 (MQ=255)

                                                        ggCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTc                                                                              >  2:1567699/1‑140 (MQ=255)

                                                            gCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTgcg                                                                          >  2:3399898/1‑140 (MQ=255)

                                                              tctcCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGcgcc                                                                        >  2:3471106/1‑140 (MQ=255)

                                                                tcCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGcgccgc                                                                      <  2:2911049/140‑1 (MQ=255)

                                                                       gTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGtt                                                               <  2:1198197/140‑1 (MQ=255)

                                                                         tATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTAt                                                             <  2:3044955/140‑1 (MQ=255)

                                                                         tATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTAt                                                             >  2:439718/1‑140 (MQ=255)

                                                                          aTGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGcgccg                                                                       >  1:3157311/1‑129 (MQ=255)

                                                                             gTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTgg                                                         >  1:632534/1‑140 (MQ=255)

                                                                              tCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGc                                                        <  2:2930101/140‑1 (MQ=255)

                                                                              tCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGc                                                        >  2:681748/1‑140 (MQ=255)

                                                                              tCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGc                                                        <  2:491225/140‑1 (MQ=255)

                                                                              tCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGc                                                        <  2:3368853/140‑1 (MQ=255)

                                                                               cGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCa                                                       >  1:2898449/1‑140 (MQ=255)

                                                                                gTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCaa                                                      <  2:712786/140‑1 (MQ=255)

                                                                                gTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCaa                                                      <  2:1592847/140‑1 (MQ=255)

                                                                                gTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCaa                                                      <  1:3402513/140‑1 (MQ=255)

                                                                                gTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCaa                                                      >  2:1468573/1‑140 (MQ=255)

                                                                                   aaCCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCa                                                   >  1:2811527/1‑140 (MQ=255)

                                                                                    aCCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCAt                                                  <  2:2811527/140‑1 (MQ=255)

                                                                                        gTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGTTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGt                                              >  2:1319070/1‑140 (MQ=255)

                                                                                        gTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGt                                              >  2:2191680/1‑140 (MQ=255)

                                                                                          attattAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGa                                            <  1:1268702/140‑1 (MQ=255)

                                                                                            tattaATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACa                                          <  1:3407155/140‑1 (MQ=255)

                                                                                            tattaATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACa                                          <  1:1324580/140‑1 (MQ=255)

                                                                                            tattaATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACa                                          <  1:2253741/140‑1 (MQ=255)

                                                                                            tattaATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACa                                          <  1:2214846/140‑1 (MQ=255)

                                                                                             attaATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAg                                         <  1:1142561/140‑1 (MQ=255)

                                                                                              ttaATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGa                                        >  1:2710123/1‑140 (MQ=255)

                                                                                              ttaATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGa                                        >  2:1251320/1‑140 (MQ=255)

                                                                                              ttaATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGa                                        >  2:3262639/1‑140 (MQ=255)

                                                                                                aaTCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGatt                                      >  2:1326305/1‑140 (MQ=255)

                                                                                                 aTCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGatta                                     >  2:26602/1‑140 (MQ=255)

                                                                                                  tCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGattat                                    >  1:492286/1‑140 (MQ=255)

                                                                                                   cGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGGCAGattatt                                   >  1:2052034/1‑140 (MQ=255)

                                                                                                     gCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATtattat                                 >  1:475278/1‑140 (MQ=255)

                                                                                                      ccTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATc                                <  1:940999/140‑1 (MQ=255)

                                                                                                       cTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATcc                               <  2:405773/140‑1 (MQ=255)

                                                                                                        tGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTTTCCt                              >  2:1539292/1‑140 (MQ=255)

                                                                                                        tGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCt                              <  2:492286/140‑1 (MQ=255)

                                                                                                        tGACAATTTTTGCGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCt                              <  1:103279/140‑1 (MQ=255)

                                                                                                                    cGTTAGGTAGTCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGtt                  >  2:2572514/1‑140 (MQ=255)

                                                                                                                              tCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGt                   >  1:2977267/1‑129 (MQ=255)

                                                                                                                              tCTGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTAttt        >  1:453272/1‑140 (MQ=255)

                                                                                                                                tGGGGATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTAttttt      <  2:3287369/140‑1 (MQ=255)

                                                                                                                                 ggggATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTg     <  1:1506192/140‑1 (MQ=255)

                                                                                                                                  gggATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTGc    >  2:2623827/1‑140 (MQ=255)

                                                                                                                                   ggATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTGCg   >  2:2358264/1‑140 (MQ=255)

                                                                                                                                   ggATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTGCg   >  1:2526835/1‑140 (MQ=255)

                                                                                                                                   ggATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTGCg   >  1:1879835/1‑140 (MQ=255)

                                                                                                                                    gATGCCGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTGCgg  <  1:439718/140‑1 (MQ=255)

CAGTGCCAGCCTTAGTCTGTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTGCGG  >  NC_000913/1740039‑1740310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`