BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,094,406	T→C	L225L (TTA→TTG)	yggR ←	Type II/IV secretion system family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,094,406	0	T	C	100.0%	749.5 / NA	206	L225L (TTA→TTG)	yggR	Type II/IV secretion system family protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (108/98); total (108/98)

Only 100 of 210 total aligned reads displayed.

TCCTGTTTATCCACTTCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGTAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGCGAACGTCA  >  NC_000913/3094269‑3094542

tcctGTTTATCCACTTCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCaa                                                                                                                                        >  2:921964/1‑140 (MQ=255)

    gTTTATCCACTTCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCTACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGtt                                                                                                                                    >  1:2832015/1‑140 (MQ=255)

       tATCCACTTCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGcc                                                                                                                                 >  1:2143448/1‑140 (MQ=255)

       tATCCACTTCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGcc                                                                                                                                 >  1:2447341/1‑140 (MQ=255)

       tATCCACTTCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGcc                                                                                                                                 >  2:2889305/1‑140 (MQ=255)

       tATCCACTTCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGcc                                                                                                                                 >  2:3183668/1‑140 (MQ=255)

       tATCCACTTCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGcc                                                                                                                                 >  2:1850590/1‑140 (MQ=255)

         tCCACTTCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTg                                                                                                                                   >  2:1353630/1‑136 (MQ=255)

              ttCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCa                                                                                                                          <  1:1581410/140‑1 (MQ=255)

               tCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCaa                                                                                                                         >  1:1361812/1‑140 (MQ=255)

               tCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCaa                                                                                                                         >  1:1996441/1‑140 (MQ=255)

                ccAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCaaa                                                                                                                        <  1:1757765/140‑1 (MQ=255)

                   gCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGc                                                                                                                     >  2:1063331/1‑140 (MQ=255)

                        tgtgACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGt                                                                                                                >  1:645939/1‑140 (MQ=255)

                        tgtgACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGt                                                                                                                >  1:3262878/1‑140 (MQ=255)

                              aGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTgc                                                                                                          >  2:2003276/1‑140 (MQ=255)

                                cACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTgccg                                                                                                        >  2:2109312/1‑140 (MQ=255)

                                    gCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGt                                                                                                    <  2:3253996/140‑1 (MQ=255)

                                    gCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGt                                                                                                    <  2:2308444/140‑1 (MQ=255)

                                     cccGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTc                                                                                                   <  1:3333321/140‑1 (MQ=255)

                                     cccGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTc                                                                                                   >  1:2738713/1‑140 (MQ=255)

                                        gTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGt                                                                                                <  1:1273444/140‑1 (MQ=255)

                                          aaaCTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGc                                                                                              >  2:2101638/1‑140 (MQ=255)

                                            aCTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCa                                                                                            <  2:1967781/140‑1 (MQ=255)

                                             cTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAg                                                                                           <  1:2487294/140‑1 (MQ=255)

                                             cTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAg                                                                                           <  2:140162/140‑1 (MQ=255)

                                               aCCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGAc                                                                                         >  2:2780922/1‑140 (MQ=255)

                                               aCCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGAc                                                                                         >  1:2680935/1‑140 (MQ=255)

                                               aCCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGAc                                                                                         >  2:1495514/1‑140 (MQ=255)

                                               aCCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGAc                                                                                         >  1:1661450/1‑140 (MQ=255)

                                               aCCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGAc                                                                                         >  2:1460396/1‑140 (MQ=255)

                                                ccTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACg                                                                                        >  1:1466199/1‑140 (MQ=255)

                                                ccTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACg                                                                                        >  2:1172363/1‑140 (MQ=255)

                                                ccTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACg                                                                                        >  1:2603783/1‑140 (MQ=255)

                                                 cTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACgg                                                                                       >  1:2112908/1‑140 (MQ=255)

                                                   gCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAg                                                                                           <  1:2349358/134‑1 (MQ=255)

                                                   gCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAg                                                                                           >  2:2349358/1‑134 (MQ=255)

                                                   gCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGAt                                                                                     >  2:3342455/1‑140 (MQ=255)

                                                    ccAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGAtt                                                                                    >  2:1691535/1‑140 (MQ=255)

                                                     cAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATCTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTg                                                                                   <  2:2832015/140‑1 (MQ=255)

                                                        ttGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGt                                                                                  >  2:347297/1‑138 (MQ=255)

                                                               cGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTc                                                                         <  2:1441404/140‑1 (MQ=255)

                                                               cGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTc                                                                         <  1:2544802/140‑1 (MQ=255)

                                                                 cACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCAc                                                                       >  2:2532104/1‑140 (MQ=255)

                                                                 cACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCAc                                                                       <  2:1130818/140‑1 (MQ=255)

                                                                  aCGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAGTGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACg                                                                      <  2:656649/140‑1 (MQ=255)

                                                                  aCGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTAACg                                                                      >  1:3179902/1‑140 (MQ=255)

                                                                     gggTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAg                                                                   >  1:2790021/1‑140 (MQ=255)

                                                                     gggTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAg                                                                   >  1:1601626/1‑140 (MQ=255)

                                                                      ggTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGc                                                                  >  2:1283319/1‑140 (MQ=255)

                                                                           ttttCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTcc                                                             >  1:2258715/1‑140 (MQ=255)

                                                                              tCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGACTCGCTGTCACGCAGCTCTCCGAg                                                          >  1:1448924/1‑140 (MQ=255)

                                                                                cTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTc                                                                         <  1:2103343/123‑1 (MQ=255)

                                                                                cTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCa                                                        <  1:1495514/140‑1 (MQ=255)

                                                                                cTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCa                                                        >  1:2217263/1‑140 (MQ=255)

                                                                                  gcgcCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAg                                                                   >  2:1592248/1‑127 (MQ=255)

                                                                                  gcgcCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCaaa                                                      >  1:995619/1‑140 (MQ=255)

                                                                                  gcgcCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCaaa                                                      <  1:2532104/140‑1 (MQ=255)

                                                                                   cgcCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCaaaa                                                     >  2:2865481/1‑140 (MQ=255)

                                                                                    gcCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAAt                                                    <  2:2217263/140‑1 (MQ=255)

                                                                                    gcCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAAt                                                    <  1:76311/140‑1 (MQ=255)

                                                                                    gcCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAAt                                                    <  2:2365948/140‑1 (MQ=255)

                                                                                    gcCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAAt                                                    <  1:2019268/140‑1 (MQ=255)

                                                                                     ccGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATc                                                   >  1:921568/1‑140 (MQ=255)

                                                                                        gAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATcaca                                                >  2:1642520/1‑140 (MQ=255)

                                                                                            tGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAg                                            <  2:2486117/140‑1 (MQ=255)

                                                                                                tCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATc                                        >  1:462045/1‑140 (MQ=255)

                                                                                                    ccaGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTcc                                    >  2:53337/1‑140 (MQ=255)

                                                                                                    ccaGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTcc                                    <  2:972920/140‑1 (MQ=255)

                                                                                                       gTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGc                                 >  2:2929403/1‑140 (MQ=255)

                                                                                                       gTCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGc                                 >  2:1824712/1‑140 (MQ=255)

                                                                                                        tCGCTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCa                                >  1:1520363/1‑140 (MQ=255)

                                                                                                           cTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATg                             >  2:735141/1‑140 (MQ=255)

                                                                                                           cTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATg                             <  1:1855257/140‑1 (MQ=255)

                                                                                                           cTCAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATg                             >  2:2707714/1‑140 (MQ=255)

                                                                                                             cAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCg                           <  1:1824712/140‑1 (MQ=255)

                                                                                                             cAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCg                           <  2:897823/140‑1 (MQ=255)

                                                                                                             cAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCg                           <  2:2603783/140‑1 (MQ=255)

                                                                                                             cAACTGCCTGCGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCg                           <  2:2680935/140‑1 (MQ=255)

                                                                                                                  gcctgcGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCg                      >  1:1439787/1‑140 (MQ=255)

                                                                                                                    ctgcGCGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCa                    >  1:3450801/1‑140 (MQ=255)

                                                                                                                      gcgcGGCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAAt                  <  1:1157551/140‑1 (MQ=255)

                                                                                                                          ggCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCg                      >  2:1198018/1‑132 (MQ=255)

                                                                                                                          ggCACCACGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCg                      <  1:1198018/132‑1 (MQ=255)

                                                                                                                              ccacGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGc          <  1:1352734/140‑1 (MQ=255)

                                                                                                                              ccacGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGc          <  1:1063331/140‑1 (MQ=255)

                                                                                                                              ccacGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGc          <  1:101297/140‑1 (MQ=255)

                                                                                                                              ccacGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGc          <  2:3051675/140‑1 (MQ=255)

                                                                                                                              ccacGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGc          <  2:2579618/140‑1 (MQ=255)

                                                                                                                              ccacGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGc          <  1:2929403/140‑1 (MQ=255)

                                                                                                                              ccacGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGc          <  1:885529/140‑1 (MQ=255)

                                                                                                                               cacGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGCg         <  1:1850590/140‑1 (MQ=255)

                                                                                                                                acGCGTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGCGa        <  1:735141/140‑1 (MQ=255)

                                                                                                                                 cgcgTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGCGaa       >  1:2099086/1‑140 (MQ=255)

                                                                                                                                 cgcgTATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGCGaa       <  1:97217/140‑1 (MQ=255)

                                                                                                                                     tATGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGCGAACGTc   <  1:2865481/140‑1 (MQ=255)

                                                                                                                                      aTGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGc          <  2:580942/132‑1 (MQ=255)

                                                                                                                                      aTGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGCGa        <  1:1182402/134‑1 (MQ=255)

                                                                                                                                      aTGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGCGAACGTCa  >  1:2250698/1‑140 (MQ=255)

                                                                                                                                      aTGCAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGCGAACGTCa  >  2:611666/1‑140 (MQ=255)

TCCTGTTTATCCACTTCCAGCTTTTGTGACAGCACTGCCCGTAAACTACCTGCCAGTTGATTACGCACGGGGTCTTTTTCCTGCGCCGGAAATGAATCCACCAGTCGCTCAACTGCCTGCGCGGCACCACGCGTATGTAATGTTGCCAGCACCAAATGCCCGGTTTCTGCCGCCGTCAGTGCCAGACGGATTGTCTCGCTGTCACGCAGCTCTCCGAGCAAAATCACATCAGGATCTTCCCGCAATGCGGCCCGCAATCCCGATGCGAACGTCA  >  NC_000913/3094269‑3094542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`