BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,172,546	T→C	I6T (ATT→ACT)	mdaB →	NADPH:quinone oxidoreductase MdaB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,172,546	0	T	C	100.0%	788.1 / NA	216	I6T (ATT→ACT)	mdaB	NADPH:quinone oxidoreductase MdaB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (112/104); total (112/104)

Only 100 of 218 total aligned reads displayed.

TCAGAGTAAGATCAGACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGATTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTACGATGTC  >  NC_000913/3172413‑3172679

tCAGAGTAAGATCAGACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCaa                                                                                                                                 >  2:3017415/1‑140 (MQ=255)

tCAGAGTAAGATCAGACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCaa                                                                                                                                 >  2:2106541/1‑140 (MQ=255)

    agTAAGATCAGACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGAGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGgc                                                                                                                             >  2:1342195/1‑140 (MQ=255)

        aGATCAGACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGTGa                                                                                                                         <  2:304712/140‑1 (MQ=255)

              gACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAAt                                                                                                                   >  1:1063027/1‑140 (MQ=255)

              gACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAAt                                                                                                                   >  2:1042387/1‑140 (MQ=255)

              gACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAAt                                                                                                                   >  1:2462933/1‑140 (MQ=255)

              gACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAAt                                                                                                                   >  1:2283780/1‑140 (MQ=255)

              gACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAAt                                                                                                                   >  2:1879742/1‑140 (MQ=255)

              gACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAAt                                                                                                                   >  1:2753064/1‑140 (MQ=255)

                cTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTTTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTc                                                                                                                 >  1:2766725/1‑140 (MQ=255)

                cTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTc                                                                                                                 >  1:1811779/1‑140 (MQ=255)

                 ttttGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCg                                                                                                                <  2:2367910/140‑1 (MQ=255)

                   ttGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGcc                                                                                                              >  2:2730646/1‑140 (MQ=255)

                   ttGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGcc                                                                                                              <  1:1858947/140‑1 (MQ=255)

                   ttGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGcc                                                                                                              <  2:2753064/140‑1 (MQ=255)

                   ttGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGcc                                                                                                              <  2:1653880/140‑1 (MQ=255)

                   ttGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGcc                                                                                                              <  1:2440388/140‑1 (MQ=255)

                         aaTTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGcc                                                                                                              <  2:1067606/134‑1 (MQ=255)

                          aTTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTTTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCa                                                                                                       <  2:2766725/140‑1 (MQ=255)

                          aTTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCa                                                                                                       <  1:535417/140‑1 (MQ=255)

                          aTTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCa                                                                                                       <  1:2106541/140‑1 (MQ=255)

                          aTTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCa                                                                                                       <  1:3017415/140‑1 (MQ=255)

                           ttCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCaa                                                                                                      >  2:1293998/1‑140 (MQ=255)

                               cAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGt                                                                                                  <  2:2619509/140‑1 (MQ=255)

                                aaaaGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTc                                                                                                 <  1:2730646/140‑1 (MQ=255)

                                    gACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACt                                                                                             <  2:1786038/140‑1 (MQ=255)

                                     aCTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTg                                                                                            >  1:2916966/1‑140 (MQ=255)

                                        ttGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTcc                                                                                                        <  2:2482205/125‑1 (MQ=255)

                                        ttGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAAc                                                                                         <  2:2916966/140‑1 (MQ=255)

                                         tGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTc                                                                                                         >  2:382848/1‑123 (MQ=255)

                                          gCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGa                                                                                       <  1:254754/140‑1 (MQ=255)

                                             caTTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGacac                                                                                    <  1:40617/140‑1 (MQ=255)

                                               ttttGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACAccc                                                                                  >  1:1374678/1‑140 (MQ=255)

                                                tttGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCt                                                                                 >  1:706936/1‑140 (MQ=255)

                                                   gCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGAc                                                                              <  2:706936/140‑1 (MQ=255)

                                                      aaTTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGa                                                                           >  1:2089751/1‑140 (MQ=255)

                                                        tttCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAg                                                                         >  2:960955/1‑140 (MQ=255)

                                                        tttCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAg                                                                         >  1:664747/1‑140 (MQ=255)

                                                            aCCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCt                                                                                 <  1:2736598/128‑1 (MQ=255)

                                                            aCCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTcgc                                                                     <  1:935866/140‑1 (MQ=255)

                                                               gTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGa                                                                  <  2:2894245/140‑1 (MQ=255)

                                                                tACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGAt                                                                 <  2:2283780/140‑1 (MQ=255)

                                                                 aCCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAg                                                                         <  2:1912534/131‑1 (MQ=255)

                                                                 aCCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAg                                                                         >  1:1912534/1‑131 (MQ=255)

                                                                 aCCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATg                                                                >  2:510796/1‑140 (MQ=255)

                                                                 aCCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATg                                                                >  2:1698953/1‑140 (MQ=255)

                                                                     ctctGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTcgc                                                                     <  2:1266860/131‑1 (MQ=255)

                                                                     ctctGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGcac                                                            >  1:1355066/1‑140 (MQ=255)

                                                                     ctctGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGcac                                                            >  2:337412/1‑140 (MQ=255)

                                                                     ctctGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGcac                                                            >  2:1559495/1‑140 (MQ=255)

                                                                     ctctGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGcac                                                            >  1:235027/1‑140 (MQ=255)

                                                                     ctctGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGcac                                                            >  1:3363742/1‑140 (MQ=255)

                                                                        tgtgACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACt                                                         >  1:2476976/1‑140 (MQ=255)

                                                                           gACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTgcg                                                      <  1:1559495/140‑1 (MQ=255)

                                                                           gACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTgcg                                                      <  1:1961201/140‑1 (MQ=255)

                                                                              gTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCACCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGa                                                   <  2:671352/140‑1 (MQ=255)

                                                                                 cTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCt                                                <  1:2845249/140‑1 (MQ=255)

                                                                                 cTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCt                                                >  1:1165840/1‑140 (MQ=255)

                                                                                 cTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCt                                                <  2:861539/140‑1 (MQ=255)

                                                                                 cTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCt                                                <  1:510796/140‑1 (MQ=255)

                                                                                  tataGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTgcgc                                                     <  1:2816336/134‑1 (MQ=255)

                                                                                  tataGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTgcgc                                                     >  2:2816336/1‑134 (MQ=255)

                                                                                   ataGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTg                                              <  1:1342195/140‑1 (MQ=255)

                                                                                   ataGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTg                                              <  1:1020395/140‑1 (MQ=255)

                                                                                    taGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTgcg                                                      <  1:3202139/131‑1 (MQ=255)

                                                                                       tCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCa                                          >  1:2042027/1‑140 (MQ=255)

                                                                                        cGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCat                                         >  2:574815/1‑140 (MQ=255)

                                                                                         ggCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCATCTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGTat                                         >  1:88918/1‑139 (MQ=255)

                                                                                         ggCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGAcc                                                 <  1:477009/131‑1 (MQ=255)

                                                                                         ggCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCatg                                        >  2:1529173/1‑140 (MQ=255)

                                                                                         ggCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCatg                                        >  1:3320809/1‑140 (MQ=255)

                                                                                         ggCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCatg                                        >  1:3430879/1‑140 (MQ=255)

                                                                                         ggCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCat                                         >  1:3105801/1‑139 (MQ=255)

                                                                                         ggCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCat                                         <  2:3105801/139‑1 (MQ=255)

                                                                                          gCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCatga                                       <  2:916444/140‑1 (MQ=255)

                                                                                           cAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCatga                                       >  2:3181906/1‑139 (MQ=255)

                                                                                            aaaCGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTgcg                                                      >  1:1267140/1‑123 (MQ=255)

                                                                                            aaaCGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCatgatg                                     >  1:2004792/1‑140 (MQ=255)

                                                                                              aCGTCTCACCTTGAGGCTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTc                                   >  1:1762808/1‑140 (MQ=255)

                                                                                                  ctcACCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCa                               <  2:2042027/140‑1 (MQ=255)

                                                                                                     aCCTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCg                            >  2:3327525/1‑140 (MQ=255)

                                                                                                       cTTGAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGtt                          <  1:1071555/140‑1 (MQ=255)

                                                                                                          gAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTcgc                       >  1:2163527/1‑140 (MQ=255)

                                                                                                          gAGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTcgc                       >  1:1622017/1‑140 (MQ=255)

                                                                                                           aGGTTAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTcgcg                      >  1:2662520/1‑140 (MQ=255)

                                                                                                              ttAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCg                   <  2:346775/140‑1 (MQ=255)

                                                                                                               tAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGa                  >  2:2971122/1‑140 (MQ=255)

                                                                                                               tAAAAAATGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGa                  <  2:1166866/140‑1 (MQ=255)

                                                                                                                 aaaaaTGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACa                <  1:574815/140‑1 (MQ=255)

                                                                                                                    aaTGAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCg             <  1:3475747/140‑1 (MQ=255)

                                                                                                                       gAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGAc                 <  1:2938793/133‑1 (MQ=255)

                                                                                                                       gAGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACt          >  1:3069779/1‑140 (MQ=255)

                                                                                                                        aGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTa         >  1:1220792/1‑140 (MQ=255)

                                                                                                                        aGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTa         <  2:2462933/140‑1 (MQ=255)

                                                                                                                        aGCAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTa         >  2:1105124/1‑140 (MQ=255)

                                                                                                                          cAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTACg       <  1:980455/140‑1 (MQ=255)

                                                                                                                          cAACATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTACg       >  2:1416287/1‑140 (MQ=255)

                                                                                                                           aaCATCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTACGa      <  2:2163527/140‑1 (MQ=255)

                                                                                                                              aTCCTGACTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTACGATGt   <  1:786676/140‑1 (MQ=255)

TCAGAGTAAGATCAGACTTTTGCTAAATTCGCAAAAGACTTTGCACATTTTGCTAATTTCACCGTACCGCTCTGTGACGTACTATAGTCGGCAAACGTCTCACCTTGAGGTTAAAAAATGAGCAACATCCTGATTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTACGATGTC  >  NC_000913/3172413‑3172679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`